CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
plastid 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Plant-mPloc:	extracellular
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0701300-00	Rice	cytosol, vacuole	48.6	87.88
Zm00001d033634_P001	Maize	plastid	81.56	79.35
HORVU4Hr1G006090.1	Barley	plastid	67.04	70.18
TraesCS4A01G275200.1	Wheat	plastid	67.04	67.42
TraesCS4B01G038700.1	Wheat	plastid	65.92	66.67
TraesCS4D01G035600.1	Wheat	plastid	65.92	66.29
Bra018531.1-P	Field mustard	cytosol, plastid, vacuole	34.64	63.92
VIT_07s0151g00950.t01	Wine grape	plastid	48.04	50.89
GSMUA_Achr4P16580_001	Banana	plastid	48.04	48.04
KRH67228	Soybean	plastid	43.58	46.99
CDX97285	Canola	plastid	43.02	46.39
CDX91314	Canola	plastid	43.02	46.39
AT4G02725.1	Thale cress	plastid	42.46	46.06
CDY22076	Canola	plastid	40.78	45.62
CDY21914	Canola	plastid	40.78	45.34
PGSC0003DMT400049761	Potato	plastid	38.55	44.52
Solyc09g065300.2.1	Tomato	plastid	47.49	40.67
Bra036243.1-P	Field mustard	plastid	26.26	37.9

Protein Annotations

EnsemblPlants:OQU91145	EnsemblPlantsGene:SORBI_3001G124800	EntrezGene:8063416	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0009507	GO:GO:0009536	GO:GO:0016020	GO:GO:0016021	PANTHER:PTHR36046
ProteinID:OQU91145	ProteinID:OQU91145.1	RefSeq:XP_002466609.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0001A82910
UniProt:A0A1Z5S5X4	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:-:9822727..9824880

Molecular Weight (calculated)

19175.0 Da

IEP (calculated)

6.325

GRAVY (calculated)

0.113

Length

179 amino acids

Sequence
(BLAST)

001: MGALCLLCPC PSTPPPCPCG TRATAPSPFF SCAPTAAATR LQLCGRSQRR AGVARVGGGG GGKGESGKTG AAAFFDEDGV VDDMDGYLNY LSLEYDSVWD
101: TKPAWCQPWT ILLTGTVVVA CSWVLIQSAV ITAGVSFVIC AWWYIFLYSY PKAYTEMIAE RRRKVASGAE DTYGMEKIQ

Best Arabidopsis Sequence Match ( AT4G02725.1 )
(BLAST)

001: MASLSMSAVS LSPFRPQTEN LLSKLSFRTN LHSFNLKPIR ISTKVRSFGG NRREPKDSRF VDEKGVVDDM EGFLDNLSLE YDSVWDTKPS WCQPWTIMLT
101: GLSIVACSWV ILHSVIVSSL AVGVIGAWWY IFLYSYPKSY SEMIAERRKR VADGFEDIYG KNKPS

Arabidopsis Description

At4g02725 [Source:UniProtKB/TrEMBL;Acc:Q6DBF6]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.