Subcellular Localization
min:
: max
Winner_takes_all: cytosol, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 2
- golgi 2
- plasma membrane 3
- endoplasmic reticulum 2
- vacuole 3
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra018531.1-P | Field mustard | cytosol, plastid, vacuole | 60.61 | 61.86 |
| HORVU4Hr1G006090.1 | Barley | plastid | 86.87 | 50.29 |
| OQU91145 | Sorghum | plastid | 87.88 | 48.6 |
| TraesCS4B01G038700.1 | Wheat | plastid | 86.87 | 48.59 |
| TraesCS4D01G035600.1 | Wheat | plastid | 86.87 | 48.31 |
| TraesCS4A01G275200.1 | Wheat | plastid | 86.87 | 48.31 |
| Zm00001d033634_P001 | Maize | plastid | 84.85 | 45.65 |
| VIT_07s0151g00950.t01 | Wine grape | plastid | 75.76 | 44.38 |
| KRH67228 | Soybean | plastid | 69.7 | 41.57 |
| GSMUA_Achr4P16580_001 | Banana | plastid | 72.73 | 40.22 |
| CDY22076 | Canola | plastid | 62.63 | 38.75 |
| AT4G02725.1 | Thale cress | plastid | 63.64 | 38.18 |
| CDX97285 | Canola | plastid | 63.64 | 37.95 |
| CDX91314 | Canola | plastid | 63.64 | 37.95 |
| CDY21914 | Canola | plastid | 61.62 | 37.89 |
| PGSC0003DMT400049761 | Potato | plastid | 55.56 | 35.48 |
| Solyc09g065300.2.1 | Tomato | plastid | 72.73 | 34.45 |
| Bra036243.1-P | Field mustard | plastid | 35.35 | 28.23 |
Protein Annotations
| EnsemblPlants:Os03t0701300-00 | EnsemblPlantsGene:Os03g0701300 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0009507 | GO:GO:0009536 | GO:GO:0016020 | GO:GO:0016021 | PANTHER:PTHR36046 | ProteinID:BAS85932.1 |
| TMHMM:TMhelix | UniParc:UPI0003939736 | UniProt:A0A0P0W1V6 | MapMan:35.2 | : | : |
Description
Similar to predicted protein. (Os03t0701300-00)
Coordinates
chr3:+:28149077..28150967
Molecular Weight (calculated)
11256.3 Da
IEP (calculated)
4.463
GRAVY (calculated)
0.022
Length
99 amino acids
Sequence
(BLAST)
(BLAST)
1: VEDMDGYLNY LSLEYDSVWD TKPSWCQPWT ILLSGAVAIA GSWLPIHSAV ITGGVSFVIC AWWYIFLYSY PKAYTEMIAE RRRKVASGAE DTYGMEKSQ
001: MASLSMSAVS LSPFRPQTEN LLSKLSFRTN LHSFNLKPIR ISTKVRSFGG NRREPKDSRF VDEKGVVDDM EGFLDNLSLE YDSVWDTKPS WCQPWTIMLT
101: GLSIVACSWV ILHSVIVSSL AVGVIGAWWY IFLYSYPKSY SEMIAERRKR VADGFEDIYG KNKPS
101: GLSIVACSWV ILHSVIVSSL AVGVIGAWWY IFLYSYPKSY SEMIAERRKR VADGFEDIYG KNKPS
Arabidopsis Description
At4g02725 [Source:UniProtKB/TrEMBL;Acc:Q6DBF6]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.