Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH37149 | Soybean | plasma membrane | 85.2 | 74.94 |
| VIT_18s0089g01410.t01 | Wine grape | plasma membrane | 55.59 | 57.85 |
| PGSC0003DMT400086024 | Potato | cytosol, endoplasmic reticulum, extracellular | 21.79 | 55.32 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 55.03 | 55.18 |
| KRH37148 | Soybean | cytosol, peroxisome, plasma membrane | 61.17 | 54.61 |
| KRH37147 | Soybean | nucleus, peroxisome, plasma membrane | 61.17 | 53.55 |
| KRH12149 | Soybean | plasma membrane | 60.06 | 53.22 |
| PGSC0003DMT400090938 | Potato | endoplasmic reticulum, extracellular | 23.46 | 52.83 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 54.19 | 50.79 |
| AT1G30840.1 | Thale cress | peroxisome, plasma membrane, vacuole | 52.79 | 49.48 |
| PGSC0003DMT400090756 | Potato | endoplasmic reticulum, extracellular, vacuole | 19.83 | 49.31 |
| Bra023141.1-P | Field mustard | plasma membrane | 53.63 | 49.1 |
| Bra023144.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 53.63 | 49.1 |
| CDY02338 | Canola | plasma membrane | 43.58 | 48.75 |
| CDY09533 | Canola | plasma membrane | 43.3 | 48.44 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 53.63 | 48.24 |
| CDY09527 | Canola | plasma membrane | 43.02 | 48.12 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 54.75 | 47.69 |
| PGSC0003DMT400035529 | Potato | cytosol, mitochondrion, peroxisome, plastid | 54.47 | 45.99 |
| GSMUA_Achr6P30590_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 41.9 | 43.6 |
| GSMUA_Achr3P16440_001 | Banana | extracellular, peroxisome, plastid | 43.58 | 41.27 |
| TraesCS3B01G300900.1 | Wheat | plastid | 43.58 | 41.05 |
| TraesCS3A01G267500.1 | Wheat | plastid | 43.3 | 40.47 |
| EES18657 | Sorghum | mitochondrion | 38.83 | 40.29 |
| TraesCS3D01G267700.1 | Wheat | plastid | 43.02 | 40.21 |
| GSMUA_Achr9P06170_001 | Banana | cytosol | 41.9 | 39.89 |
| Os01t0680200-01 | Rice | cytosol, plasma membrane, vacuole | 42.18 | 39.02 |
| Zm00001d043858_P001 | Maize | vacuole | 43.02 | 38.89 |
| HORVU3Hr1G062690.1 | Barley | plastid | 43.3 | 38.75 |
| EES01264 | Sorghum | plasma membrane | 41.62 | 38.5 |
| OQU78406 | Sorghum | plastid | 39.39 | 38.21 |
| Zm00001d011603_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 41.06 | 38.18 |
| Zm00001d038965_P001 | Maize | mitochondrion, plastid | 38.83 | 37.98 |
| GSMUA_Achr8P27440_001 | Banana | mitochondrion | 44.13 | 37.35 |
| Os01t0504100-01 | Rice | plasma membrane | 39.39 | 37.2 |
| Os05t0556800-01 | Rice | mitochondrion | 39.11 | 36.55 |
| TraesCS1B01G413400.1 | Wheat | plastid | 37.99 | 35.88 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 37.71 | 35.71 |
| TraesCS1A01G386000.1 | Wheat | plastid | 37.43 | 35.64 |
| TraesCS1D01G394000.1 | Wheat | plastid | 37.71 | 35.62 |
| TraesCS1D01G393900.1 | Wheat | plastid | 39.11 | 35.53 |
| HORVU1Hr1G085120.1 | Barley | plastid | 39.39 | 35.25 |
| TraesCS1B01G413500.1 | Wheat | plastid | 39.39 | 34.9 |
| TraesCS1A01G385800.1 | Wheat | plastid | 39.11 | 34.65 |
| TraesCS1A01G386100.1 | Wheat | plastid | 39.11 | 34.65 |
| TraesCS1D01G394100.1 | Wheat | plastid | 38.55 | 34.16 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 38.55 | 33.91 |
| TraesCS1B01G413300.1 | Wheat | mitochondrion | 38.83 | 32.94 |
| HORVU1Hr1G085150.1 | Barley | plastid | 38.27 | 32.31 |
| KRH72416 | Soybean | endoplasmic reticulum, plasma membrane | 30.45 | 31.69 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 31.56 | 31.22 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 31.28 | 30.68 |
| KRH62277 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 30.17 | 30.25 |
| KRH57573 | Soybean | plasma membrane | 30.45 | 29.95 |
| KRH52994 | Soybean | cytosol, nucleus, plasma membrane | 28.49 | 29.57 |
| KRH04294 | Soybean | plasma membrane | 31.56 | 28.97 |
| KRH13483 | Soybean | plasma membrane | 23.46 | 27.36 |
| KRH54954 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 26.82 | 26.59 |
| KRH04293 | Soybean | plasma membrane | 26.54 | 26.54 |
| KRH26102 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 26.54 | 26.17 |
| KRH45390 | Soybean | plasma membrane | 22.91 | 25.62 |
| KRH21843 | Soybean | mitochondrion | 29.61 | 25.24 |
| KRH57570 | Soybean | plasma membrane | 25.98 | 23.85 |
| KRG98518 | Soybean | plasma membrane | 25.7 | 22.22 |
| KRH46353 | Soybean | plasma membrane | 25.7 | 22.17 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| EMBL:ACUP02009269 | EnsemblPlants:KRH12150 | EnsemblPlantsGene:GLYMA_15G155000 | EntrezGene:100796097 | GO:GO:0003674 | GO:GO:0005215 |
| GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant |
| PANTHER:PTHR31376 | PANTHER:PTHR31376:SF3 | PFAM:PF16913 | ProteinID:KRH12150 | ProteinID:KRH12150.1 | SEG:seg |
| SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000233B325 | UniProt:I1MGS5 | MapMan:24.2.1.6 | : |
Description
hypothetical protein
Coordinates
chr15:-:12907315..12908671
Molecular Weight (calculated)
40542.5 Da
IEP (calculated)
8.125
GRAVY (calculated)
0.351
Length
358 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNIEHHHHE DQKSMTNKRY RPLLFLNYVL LFVGSVSSSL LTKYYFNHKG SSKWVSSWVQ CAGFPFLVIP IFLPSLLNYT ERKPFSDFTP KMLWYSFCVG
101: VMLGFNNLLY SWGVAYLPIS TSGILLSFQL AFTLILSAII VKQKITFSNL NSMILITMSS AILAFNSSHE KSEGLTQKDY IIGFSCTIGA SFLFSLYLPL
201: MERIYERVYC YEMVMEMQII MEIAATALVT GGMVYKGGFS EMREEAERVF DKGSTFYWLT VVSSVVTWQC CYMGTAGLVF LTSSVTGGVS ANALLSLNVL
301: AGWFVYHDAF NGFKIVATVL CIWGFCSYVY CMYFKRRQEE AAERRNSSGG STTELVVK
101: VMLGFNNLLY SWGVAYLPIS TSGILLSFQL AFTLILSAII VKQKITFSNL NSMILITMSS AILAFNSSHE KSEGLTQKDY IIGFSCTIGA SFLFSLYLPL
201: MERIYERVYC YEMVMEMQII MEIAATALVT GGMVYKGGFS EMREEAERVF DKGSTFYWLT VVSSVVTWQC CYMGTAGLVF LTSSVTGGVS ANALLSLNVL
301: AGWFVYHDAF NGFKIVATVL CIWGFCSYVY CMYFKRRQEE AAERRNSSGG STTELVVK
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Arabidopsis Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.