Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- endoplasmic reticulum 2
- plasma membrane 3
- plastid 1
- extracellular 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | KRH11194 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | KRH21063 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | KRH44805 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | KRH58233 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 92.82 | 92.05 |
| CDY12545 | Canola | plasma membrane | 59.12 | 71.81 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 56.91 | 68.9 |
| AT1G44750.1 | Thale cress | plasma membrane | 68.51 | 65.44 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 65.19 | 64.84 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 65.75 | 64.5 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 66.57 | 63.42 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 50.55 | 60.6 |
| GSMUA_Achr5P12690_001 | Banana | plasma membrane | 58.29 | 60.46 |
| Bra036955.1-P | Field mustard | plasma membrane | 68.51 | 59.76 |
| CDY14989 | Canola | plasma membrane | 68.23 | 59.52 |
| CDX71327 | Canola | plasma membrane | 67.96 | 59.13 |
| Os02t0689200-03 | Rice | plasma membrane | 61.05 | 57.4 |
| Bra037874.1-P | Field mustard | plasma membrane | 52.21 | 56.59 |
| Zm00001d051504_P001 | Maize | golgi, peroxisome, plasma membrane | 59.67 | 56.25 |
| AT4G08700.1 | Thale cress | plasma membrane | 55.8 | 55.96 |
| AT5G41160.1 | Thale cress | plasma membrane | 54.7 | 54.4 |
| TraesCS6B01G289900.1 | Wheat | peroxisome | 58.29 | 54.24 |
| Zm00001d002515_P001 | Maize | peroxisome | 55.52 | 54.03 |
| TraesCS6D01G243400.1 | Wheat | golgi, peroxisome, plasma membrane | 58.01 | 53.85 |
| TraesCS6A01G262900.1 | Wheat | plasma membrane | 57.73 | 53.59 |
| KRH13483 | Soybean | plasma membrane | 45.3 | 53.42 |
| EES11332 | Sorghum | peroxisome | 54.97 | 53.21 |
| TraesCS2B01G474100.1 | Wheat | peroxisome | 54.14 | 52.41 |
| TraesCS2D01G452400.1 | Wheat | peroxisome | 54.14 | 52.41 |
| TraesCS5A01G413800.1 | Wheat | peroxisome | 54.14 | 52.41 |
| HORVU2Hr1G105300.1 | Barley | peroxisome | 53.87 | 52.14 |
| TraesCS2A01G452600.1 | Wheat | peroxisome | 53.59 | 51.87 |
| CDY54350 | Canola | plasma membrane | 46.96 | 51.2 |
| HORVU6Hr1G066740.2 | Barley | golgi, mitochondrion | 58.84 | 50.96 |
| TraesCS2B01G473900.1 | Wheat | plasma membrane | 53.59 | 50.92 |
| CDX75141 | Canola | plasma membrane | 46.69 | 50.9 |
| TraesCS2D01G452200.1 | Wheat | plasma membrane | 52.76 | 50.13 |
| KRH04294 | Soybean | plasma membrane | 53.59 | 49.74 |
| TraesCS2A01G452400.1 | Wheat | plasma membrane | 52.49 | 49.74 |
| TraesCS2D01G452300.1 | Wheat | peroxisome | 51.93 | 49.09 |
| KRH21843 | Soybean | mitochondrion | 55.52 | 47.86 |
| HORVU2Hr1G105340.1 | Barley | golgi, peroxisome, plasma membrane | 51.38 | 47.57 |
| TraesCS2A01G452500.1 | Wheat | peroxisome | 50.55 | 47.29 |
| Zm00001d003417_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 40.61 | 46.96 |
| KRH57573 | Soybean | plasma membrane | 46.41 | 46.15 |
| HORVU2Hr1G105360.5 | Barley | peroxisome | 52.49 | 46.12 |
| KRH45390 | Soybean | plasma membrane | 40.61 | 45.94 |
| KXG27004 | Sorghum | golgi, peroxisome, vacuole | 49.72 | 45.69 |
| KRH04293 | Soybean | plasma membrane | 45.03 | 45.53 |
| TraesCS2B01G473800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 43.37 | 45.51 |
| HORVU2Hr1G105240.3 | Barley | peroxisome | 51.38 | 45.15 |
| Os09t0548600-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 41.99 | 43.93 |
| KRH57570 | Soybean | plasma membrane | 46.69 | 43.33 |
| EES11334 | Sorghum | peroxisome | 45.58 | 43.31 |
| EES05697 | Sorghum | plastid | 59.39 | 42.91 |
| Zm00001d002514_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane | 45.03 | 42.67 |
| TraesCS2B01G474000.1 | Wheat | cytosol, peroxisome, plasma membrane | 51.66 | 41.83 |
| TraesCS2D01G452100.1 | Wheat | plasma membrane | 45.03 | 41.58 |
| KRG98518 | Soybean | plasma membrane | 47.24 | 41.3 |
| KXG26473 | Sorghum | cytosol, peroxisome, plasma membrane | 43.92 | 40.77 |
| KRH46353 | Soybean | plasma membrane | 46.69 | 40.72 |
| KXG24673 | Sorghum | peroxisome | 44.2 | 39.02 |
| EES10997 | Sorghum | plasma membrane | 43.92 | 38.13 |
| TraesCS2A01G452300.1 | Wheat | mitochondrion | 45.3 | 37.53 |
| KRH26102 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 33.43 | 33.33 |
| KRH54954 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 32.04 | 32.13 |
| KRH72416 | Soybean | endoplasmic reticulum, plasma membrane | 30.39 | 31.98 |
| KRH12150 | Soybean | plasma membrane | 31.22 | 31.56 |
| KRH52994 | Soybean | cytosol, nucleus, plasma membrane | 29.83 | 31.3 |
| KRH62277 | Soybean | cytosol, endoplasmic reticulum, plasma membrane | 30.11 | 30.53 |
| HORVU5Hr1G019740.1 | Barley | cytosol, plastid | 27.62 | 30.03 |
| KRH37149 | Soybean | plasma membrane | 30.94 | 27.52 |
| KRH37148 | Soybean | cytosol, peroxisome, plasma membrane | 30.11 | 27.18 |
| Zm00001d026042_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 49.72 | 26.75 |
| KRH12149 | Soybean | plasma membrane | 29.01 | 25.99 |
| KRH37147 | Soybean | nucleus, peroxisome, plasma membrane | 29.28 | 25.92 |
Protein Annotations
| EntrezGene:100819409 | MapMan:24.2.1.6 | EMBL:ACUP02006032 | EMBL:BT098406 | UniProt:C6TL30 | EnsemblPlantsGene:GLYMA_09G247200 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | EnsemblPlants:KRH40250 | ProteinID:KRH40250 | ProteinID:KRH40250.1 | PFAM:PF16913 | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF2 | InterPro:PUP_plant | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0001B16EF5 | SEG:seg |
Description
hypothetical protein
Coordinates
chr9:+:46867572..46870266
Molecular Weight (calculated)
39574.4 Da
IEP (calculated)
6.256
GRAVY (calculated)
0.594
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MTDNEEPMIV PGSMSELAFN KYKRWQWWCL VTLSIAFLIV GQSAAVILGR FYYDQGGNSK WMATLVQTAA FPILFIPLFT IPSPPEASTS ASPPIKIILL
101: IYFGLGVLIA ADNMMYSTGL LYLSASTYSL ICASQLAFNA VFSYFINSQK FTALIINSTV VLTLSAALLA VNEDTDEPSG FSKGKYIIGF LCTLGASAVY
201: SLLLSLMQLT FEKVLKKETF SVVLEMQIYT SFVASGASVI GLFASGEWRT LHGEMEGFQK GYVAYVMTLV WTSIAWQVCS VGVVGLIFLV SSLYSNVIST
301: VSLAVTPIAA VIVFHDKMNG VKIISMLLAL WGFASYIYQN YLDDSKTRHA QAATKSQNDS SC
101: IYFGLGVLIA ADNMMYSTGL LYLSASTYSL ICASQLAFNA VFSYFINSQK FTALIINSTV VLTLSAALLA VNEDTDEPSG FSKGKYIIGF LCTLGASAVY
201: SLLLSLMQLT FEKVLKKETF SVVLEMQIYT SFVASGASVI GLFASGEWRT LHGEMEGFQK GYVAYVMTLV WTSIAWQVCS VGVVGLIFLV SSLYSNVIST
301: VSLAVTPIAA VIVFHDKMNG VKIISMLLAL WGFASYIYQN YLDDSKTRHA QAATKSQNDS SC
001: MSGNQEPILV KEESVVGIPT PLLKLKSWQW WVLVSVNIFF LIGGQAASVL LGRFYYDEGG NSKWMATLVQ TAAFPILYIP LLLLPSSASV ESSESSCSLK
101: YIVLIYVLLG VIIAGDNMLY SVGLLYLSAS TYSLICATQL AFNAVFSYFI NAQKFTALIL NSVVLLSFSA ALIALNDDAD TPSGVSRSKY IVGFVCTLAA
201: SALYSLLLSL MQFSFEKILK RETFSVVLEM QIYTSLVATC VSVIGLFASG EWRTLHGEME GYHKGQASYV LTLVWTAVTW QVCSVGVVGL IFLVTSLFSN
301: VISTLSLAVT PLAALVVFRD KMSGVKIMAM LIAIWGFASY VYQNHIDDLK VRQARQQAQA GRVEPPC
101: YIVLIYVLLG VIIAGDNMLY SVGLLYLSAS TYSLICATQL AFNAVFSYFI NAQKFTALIL NSVVLLSFSA ALIALNDDAD TPSGVSRSKY IVGFVCTLAA
201: SALYSLLLSL MQFSFEKILK RETFSVVLEM QIYTSLVATC VSVIGLFASG EWRTLHGEME GYHKGQASYV LTLVWTAVTW QVCSVGVVGL IFLVTSLFSN
301: VISTLSLAVT PLAALVVFRD KMSGVKIMAM LIAIWGFASY VYQNHIDDLK VRQARQQAQA GRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.