Factsheet for TraesCS2A01G452300.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
plasma membrane 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plasma membrane, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41160.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6D01G152200.1	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G452100.1	Wheat	plasma membrane	89.02	99.23
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	77.35	97.97
Zm00001d003417_P001	Maize	endoplasmic reticulum, extracellular, vacuole	54.69	76.36
KXG26473	Sorghum	cytosol, peroxisome, plasma membrane	63.39	71.03
KXG24673	Sorghum	peroxisome	63.62	67.8
TraesCS2A01G452400.1	Wheat	plasma membrane	42.56	48.69
CDY12545	Canola	plasma membrane	32.95	48.32
TraesCS2A01G452500.1	Wheat	peroxisome	42.79	48.32
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	31.58	46.15
TraesCS6A01G262900.1	Wheat	plasma membrane	40.5	45.38
KRH40250	Soybean	endoplasmic reticulum, plasma membrane, vacuole	37.53	45.3
TraesCS5A01G413800.1	Wheat	peroxisome	38.44	44.92
KRH00977	Soybean	endoplasmic reticulum, plasma membrane, vacuole	37.3	44.66
TraesCS2A01G452600.1	Wheat	peroxisome	37.99	44.38
AT1G44750.1	Thale cress	plasma membrane	37.76	43.54
Solyc01g088550.2.1	Tomato	plasma membrane	35.24	42.31
PGSC0003DMT400004320	Potato	plasma membrane	35.47	42.01
Bra037874.1-P	Field mustard	plasma membrane	31.81	41.62
VIT_19s0014g00150.t01	Wine grape	plasma membrane	35.47	40.9
Bra036955.1-P	Field mustard	plasma membrane	38.44	40.48
AT4G08700.1	Thale cress	plasma membrane	33.41	40.44
CDY14989	Canola	plasma membrane	38.22	40.24
CDX71327	Canola	plasma membrane	38.22	40.14
VIT_15s0021g00650.t01	Wine grape	plastid	34.55	39.74
AT5G41160.1	Thale cress	plasma membrane	32.49	39.01
KRH13483	Soybean	plasma membrane	27.23	38.76
CDY54350	Canola	plasma membrane	27.69	36.45
CDX75141	Canola	plasma membrane	27.46	36.14
KRH21843	Soybean	mitochondrion	34.32	35.71
TraesCS5A01G247800.1	Wheat	cytosol, peroxisome, plasma membrane	25.4	30.75
TraesCS5A01G247600.1	Wheat	plasma membrane	24.26	28.12
TraesCS5A01G429100.1	Wheat	plasma membrane	24.49	27.79
TraesCS5A01G247700.1	Wheat	plasma membrane	24.03	27.78
TraesCS4A01G404200.1	Wheat	plastid	24.71	27.62
TraesCS4A01G404300.1	Wheat	plastid	24.71	27.62
TraesCS4A01G404400.1	Wheat	plastid	24.49	27.44
TraesCS4A01G404100.1	Wheat	plastid	24.49	27.23
TraesCS3A01G267500.1	Wheat	plastid	23.8	27.15
TraesCS5A01G358700.2	Wheat	cytosol, endoplasmic reticulum, plastid	24.03	26.25
TraesCS1A01G386000.1	Wheat	plastid	22.2	25.8
TraesCS1A01G386100.1	Wheat	plastid	22.88	24.75
TraesCS1A01G385800.1	Wheat	plastid	22.88	24.75

Protein Annotations

EnsemblPlants:TraesCS2A01G452300.1	EnsemblPlantsGene:TraesCS2A01G452300	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF14
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr2A:-:701488387..701490419

Molecular Weight (calculated)

46464.6 Da

IEP (calculated)

9.361

GRAVY (calculated)

0.345

Length

437 amino acids

Sequence
(BLAST)

001: MLLGSQGSVA RSTHLLARAE GCEGRTTTGE RRADTDTISF CSWSNMSSPQ EIQLQVRGSV PEQEESGHGE NGAGPKAAER RRPGTRGVRW WLMVLLDMLV
101: VLCGQTVATL LGRYYYNSGG NSKWMATLTQ SGGSPLLAIL LLLTPRDPVG EPRPAAAKMV PIYLGLGTLI GFDNLMYSYA LQYLPVSTFA LVAATQLAFN
201: SVTSRLINAQ RFTALIANSV VVLTFSAALL GVGSSSDGTS AADLPRGKYT LGFILTLSAS AVFALILSLF EVTFEKAVRG RTLRWVLRVQ MCTNFVAATV
301: AVCGLLASGE WRTIPGEMAA FEDGRARYVA TLVGTAVSWQ AMSVATLRLI TRVSSLFANV TGTVSLPLVP VFAVVLFGDR MTGIKAVAML MAVWGFLSYV
401: YQHYLDGRRA AAMGGQGGAA ECCVCKARAG GEAALPA

Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)

001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC

Arabidopsis Description

PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.