Subcellular Localization
min:
: max
Winner_takes_all: cytosol, plasma membrane, peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | EES01496 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | EES06576 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003417_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 72.82 | 90.73 |
| TraesCS2B01G473800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 66.92 | 75.65 |
| EES11334 | Sorghum | peroxisome | 73.59 | 75.33 |
| TraesCS2D01G452100.1 | Wheat | plasma membrane | 70.51 | 70.15 |
| KXG24673 | Sorghum | peroxisome | 72.31 | 68.78 |
| TraesCS2A01G452300.1 | Wheat | mitochondrion | 71.03 | 63.39 |
| EES10997 | Sorghum | plasma membrane | 61.03 | 57.07 |
| CDY12545 | Canola | plasma membrane | 37.18 | 48.66 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.15 | 47.16 |
| KXG27004 | Sorghum | golgi, peroxisome, vacuole | 44.62 | 44.16 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 40.77 | 43.92 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 40.51 | 43.41 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 41.03 | 43.36 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 40.51 | 43.29 |
| AT1G44750.1 | Thale cress | plasma membrane | 42.05 | 43.27 |
| EES11332 | Sorghum | peroxisome | 40.51 | 42.25 |
| KRH13483 | Soybean | plasma membrane | 32.82 | 41.69 |
| VIT_19s0014g00150.t01 | Wine grape | plasma membrane | 39.74 | 40.9 |
| Bra037874.1-P | Field mustard | plasma membrane | 34.62 | 40.42 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 38.97 | 40.0 |
| Bra036955.1-P | Field mustard | plasma membrane | 42.31 | 39.76 |
| CDY14989 | Canola | plasma membrane | 42.05 | 39.52 |
| CDX71327 | Canola | plasma membrane | 41.79 | 39.18 |
| AT4G08700.1 | Thale cress | plasma membrane | 35.38 | 38.23 |
| KRH21843 | Soybean | mitochondrion | 40.0 | 37.14 |
| AT5G41160.1 | Thale cress | plasma membrane | 34.62 | 37.09 |
| CDY54350 | Canola | plasma membrane | 31.03 | 36.45 |
| CDX75141 | Canola | plasma membrane | 30.26 | 35.54 |
| EES05697 | Sorghum | plastid | 44.1 | 34.33 |
| EER99038 | Sorghum | plasma membrane | 23.33 | 31.27 |
| KXG35809 | Sorghum | plasma membrane | 29.74 | 29.82 |
| EES18657 | Sorghum | mitochondrion | 24.87 | 28.12 |
| OQU93095 | Sorghum | plasma membrane | 27.18 | 28.04 |
| EER99040 | Sorghum | plasma membrane | 27.18 | 27.97 |
| EES01264 | Sorghum | plasma membrane | 27.69 | 27.91 |
| OQU89926 | Sorghum | mitochondrion, plasma membrane | 28.46 | 27.41 |
| OQU78406 | Sorghum | plastid | 25.38 | 26.83 |
Protein Annotations
| MapMan:24.2.1.6 | UniProt:A0A1B6PLD4 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | EnsemblPlants:KXG26473 | ProteinID:KXG26473 | ProteinID:KXG26473.1 |
| PFAM:PF16913 | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF14 | InterPro:PUP_plant | EnsemblPlantsGene:SORBI_3006G107100 | TMHMM:TMhelix |
| UniParc:UPI00081AB27F | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:47651325..47654281
Molecular Weight (calculated)
41273.5 Da
IEP (calculated)
9.790
GRAVY (calculated)
0.427
Length
390 amino acids
Sequence
(BLAST)
(BLAST)
001: MTHAQEIQLQ VREQESGNGE QDSRDDEPKA TKRRLTRGSA RWWMTVVLDM LMVLCGGTVG TLLGRLYYNS GGKSKWVATL MQSGGSPLLA IPLLLTPPHP
101: AEERQPAAPP SKVAAVYVGI GVLLGFDNLM YAYALLYLPV STFSLVAATQ LGFNAITSRL INAQRFTAPI ANSVVVLTFA AALLGIGSAS DDETTSSSDV
201: APRGKHALGF VLTLAASASF ALILSLFEAA FEKVIMARTT RWVLKVQMCT NLVATAVGVV GLFASGEWRT LPGEMAAFKN GRARYVLTLV GTAVCWQAAA
301: VGTVRLTARV SSLFANVTGT VALPLVPVFA VVLFGDRMTG IKAVAMLMAV WGFLSYVYQH YLDGRRAAAS GKGAECGVVC TAARTAGVSA
101: AEERQPAAPP SKVAAVYVGI GVLLGFDNLM YAYALLYLPV STFSLVAATQ LGFNAITSRL INAQRFTAPI ANSVVVLTFA AALLGIGSAS DDETTSSSDV
201: APRGKHALGF VLTLAASASF ALILSLFEAA FEKVIMARTT RWVLKVQMCT NLVATAVGVV GLFASGEWRT LPGEMAAFKN GRARYVLTLV GTAVCWQAAA
301: VGTVRLTARV SSLFANVTGT VALPLVPVFA VVLFGDRMTG IKAVAMLMAV WGFLSYVYQH YLDGRRAAAS GKGAECGVVC TAARTAGVSA
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.