Factsheet for TraesCS2B01G473800.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, vacuole

Predictor Summary:

plastid 1
endoplasmic reticulum 3
extracellular 3
vacuole 3
plasma membrane 2
golgi 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, vacuole
Any Predictor:	mitochondrion, secretory
iPSORT:	plastid
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G41160.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT5G41160.1	TraesCS6D01G152200.1	AT5G46240.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2D01G452100.1	Wheat	plasma membrane	97.97	86.22
TraesCS2A01G452300.1	Wheat	mitochondrion	97.97	77.35
Zm00001d003417_P001	Maize	endoplasmic reticulum, extracellular, vacuole	69.28	76.36
KXG26473	Sorghum	cytosol, peroxisome, plasma membrane	75.65	66.92
KXG24673	Sorghum	peroxisome	73.04	61.46
CDY12545	Canola	plasma membrane	41.16	47.65
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	39.42	45.48
TraesCS2B01G473900.1	Wheat	plasma membrane	48.41	43.83
KRH40250	Soybean	endoplasmic reticulum, plasma membrane, vacuole	45.51	43.37
KRH00977	Soybean	endoplasmic reticulum, plasma membrane, vacuole	45.51	43.01
TraesCS6B01G289900.1	Wheat	peroxisome	48.41	42.93
TraesCS2B01G474100.1	Wheat	peroxisome	46.38	42.78
Bra037874.1-P	Field mustard	plasma membrane	39.71	41.02
AT1G44750.1	Thale cress	plasma membrane	44.64	40.63
Solyc01g088550.2.1	Tomato	plasma membrane	42.32	40.11
PGSC0003DMT400004320	Potato	plasma membrane	42.61	39.84
VIT_19s0014g00150.t01	Wine grape	plasma membrane	42.9	39.05
AT4G08700.1	Thale cress	plasma membrane	40.29	38.5
TraesCS2B01G474000.1	Wheat	cytosol, peroxisome, plasma membrane	49.57	38.26
KRH13483	Soybean	plasma membrane	33.91	38.11
VIT_15s0021g00650.t01	Wine grape	plastid	41.45	37.63
Bra036955.1-P	Field mustard	plasma membrane	45.22	37.59
AT5G41160.1	Thale cress	plasma membrane	39.42	37.36
CDY14989	Canola	plasma membrane	44.93	37.35
CDX71327	Canola	plasma membrane	44.64	37.02
CDY54350	Canola	plasma membrane	33.91	35.24
CDX75141	Canola	plasma membrane	33.62	34.94
KRH21843	Soybean	mitochondrion	40.87	33.57
TraesCS2B01G617100.1	Wheat	plasma membrane	29.57	28.1
TraesCS5B01G244800.1	Wheat	plasma membrane	29.86	27.32
TraesCS4B01G304200.1	Wheat	plastid	30.43	27.06
TraesCS5B01G431200.2	Wheat	plasma membrane	29.86	26.75
TraesCS4B01G303600.1	Wheat	plasma membrane	24.35	26.67
TraesCS4B01G303900.1	Wheat	plastid	30.14	26.6
TraesCS4B01G303700.1	Wheat	plastid	30.14	26.6
TraesCS5B01G245100.1	Wheat	plastid	31.88	26.44
TraesCS5B01G244900.1	Wheat	plasma membrane	28.99	26.39
TraesCS3B01G300900.1	Wheat	plastid	28.99	26.32
TraesCS4B01G304100.1	Wheat	extracellular	10.43	25.35
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	29.28	24.51
TraesCS5B01G245000.1	Wheat	plasma membrane	19.71	24.46
TraesCS1B01G413400.1	Wheat	plastid	26.38	24.01
TraesCS1B01G413500.1	Wheat	plastid	27.83	23.76
TraesCS1B01G413300.1	Wheat	mitochondrion	27.83	22.75

Protein Annotations

EnsemblPlants:TraesCS2B01G473800.1	EnsemblPlantsGene:TraesCS2B01G473800	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF14
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr2B:-:670841997..670843034

Molecular Weight (calculated)

36440.1 Da

IEP (calculated)

9.491

GRAVY (calculated)

0.676

Length

345 amino acids

Sequence
(BLAST)

001: MVLLDMLVVL CGQTVGTLLG RYYYNSGGNS KWMATLTISG GSPLLAILLL LTPRDPAGEP RPAAAKMVPI YLGLGTLIGF DNLMYSYALQ YLPVSTFALV
101: AATQLAFNSV TSRLINAQRF TALIANSVVV LTFSAALLGV GSSSDGTSAA DLPRGKYTLG FILTLSASAV FALILSLIEV TFEKAIRGRT LRWVLRVQMC
201: TNFVAATVAV CGLLASGEWR MIPGEMAAFE DGRARYVATL VGTAVSWQAM SVATLRLITR VSSLFANVTG TVSLPLVPVF AVVLFGDRMT GIKAVAMLMA
301: VWGFLSYVYQ HYLDGRRAAA MGGQGGAAEC CVCKARTGGE AALPA

Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)

001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC

Arabidopsis Description

PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.