Factsheet for TraesCS1B01G413500.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	golgi, plasma membrane, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G386100.1	Wheat	plastid	97.28	97.28
TraesCS1D01G394100.1	Wheat	plastid	97.03	97.03
HORVU1Hr1G085230.1	Barley	mitochondrion	93.07	92.38
TraesCS1B01G413400.1	Wheat	plastid	80.2	85.49
HORVU1Hr1G085140.1	Barley	endoplasmic reticulum	78.22	83.6
TraesCS1B01G413300.1	Wheat	mitochondrion	86.63	82.94
EES18657	Sorghum	mitochondrion	65.59	76.81
Zm00001d038965_P001	Maize	mitochondrion, plastid	68.81	75.96
OQU78406	Sorghum	plastid	68.56	75.07
Os05t0556800-01	Rice	mitochondrion	69.8	73.63
TraesCS3B01G300900.1	Wheat	plastid	60.15	63.95
PGSC0003DMT400086024	Potato	cytosol, endoplasmic reticulum, extracellular	15.59	44.68
PGSC0003DMT400090756	Potato	endoplasmic reticulum, extracellular, vacuole	15.59	43.75
Solyc10g005160.1.1	Tomato	plasma membrane	38.61	43.7
VIT_18s0089g01410.t01	Wine grape	plasma membrane	37.13	43.6
Bra023141.1-P	Field mustard	plasma membrane	40.84	42.2
Bra023144.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	40.84	42.2
AT1G30840.1	Thale cress	peroxisome, plasma membrane, vacuole	39.6	41.88
CDY02338	Canola	plasma membrane	33.17	41.88
CDY09527	Canola	plasma membrane	32.43	40.94
PGSC0003DMT400090938	Potato	endoplasmic reticulum, extracellular	16.09	40.88
CDY09533	Canola	plasma membrane	32.18	40.62
Solyc10g005150.1.1	Tomato	plasma membrane	37.87	40.05
Solyc10g005170.1.1	Tomato	cytosol, peroxisome, plasma membrane	38.86	39.45
KRH12150	Soybean	plasma membrane	34.9	39.39
Solyc02g082170.1.1	Tomato	plasma membrane	38.61	37.96
KRH37148	Soybean	cytosol, peroxisome, plasma membrane	37.38	37.66
KRH37149	Soybean	plasma membrane	37.62	37.35
KRH12149	Soybean	plasma membrane	36.88	36.88
PGSC0003DMT400035529	Potato	cytosol, mitochondrion, peroxisome, plastid	38.61	36.79
KRH37147	Soybean	nucleus, peroxisome, plasma membrane	36.63	36.19
TraesCS5B01G244800.1	Wheat	plasma membrane	29.46	31.57
TraesCS4B01G303600.1	Wheat	plasma membrane	24.01	30.79
TraesCS5B01G431200.2	Wheat	plasma membrane	28.96	30.39
TraesCS2B01G617100.1	Wheat	plasma membrane	26.98	30.03
TraesCS5B01G245000.1	Wheat	plasma membrane	20.54	29.86
TraesCS4B01G304200.1	Wheat	plastid	27.72	28.87
TraesCS5B01G244900.1	Wheat	plasma membrane	26.98	28.76
TraesCS4B01G303900.1	Wheat	plastid	27.48	28.39
TraesCS4B01G303700.1	Wheat	plastid	27.23	28.13
TraesCS2B01G473800.1	Wheat	endoplasmic reticulum, extracellular, vacuole	23.76	27.83
TraesCS4B01G304100.1	Wheat	extracellular	9.65	27.46
TraesCS5B01G245100.1	Wheat	plastid	27.97	27.16
TraesCS2B01G473900.1	Wheat	plasma membrane	23.51	24.93
TraesCS2B01G474100.1	Wheat	peroxisome	22.28	24.06
TraesCS5B01G361100.2	Wheat	cytosol, endoplasmic reticulum, plastid	24.5	24.03
TraesCS6B01G289900.1	Wheat	peroxisome	22.03	22.88
TraesCS2B01G474000.1	Wheat	cytosol, peroxisome, plasma membrane	23.76	21.48
GSMUA_Achr10P...	Banana	cytosol, extracellular, golgi	1.49	5.13

Protein Annotations

EnsemblPlants:TraesCS1B01G413500.1	EnsemblPlantsGene:TraesCS1B01G413500	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF7
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr1B:+:638881954..638883168

Molecular Weight (calculated)

42579.9 Da

IEP (calculated)

9.265

GRAVY (calculated)

0.526

Length

404 amino acids

Sequence
(BLAST)

001: MPPMYNPRRP SPVRHPSTDP VYSSLTTAAT RAAMAISSGP AGAATAAPRR RTRSTVLLMA NYAALLIGSV VSSLLSRFYF QHGGQNKWVV TLVQSAGFPT
101: LVVAVFLAGR PASAPRPFLW FSRRFLAVCL FIGALMGVNN LLFAYSSSLL PVSTSSLLLS TQLAFTLVLA VAIVRHPLTF VNLNAVVLMT LCSVLLALRS
201: GDSGESPDRK GYIIGFVVTL GAAGLFSAYL PVMELLYREA VSGGFILAVE VQAVMQAMAS VVAAIGLAAT GGFSNDVAHW KGSHALYWVV VVTLVVTWQA
301: CFMGTAGVIY LTSSLHSGVC MAAVLTANVI GGVVVFGDPF GAEKAVATAL CVWGLSSYLY GEYTKNKKKA ADDQDDDTIL PGARDDGEHK SLTAGSREPG
401: SETV

Best Arabidopsis Sequence Match ( AT1G28230.1 )
(BLAST)

001: MKNGLIIINC IILTIGTCGG PLLTRLYFTN GGKRIWFMSF LSTAGFPIIL IPLLVSFLSR RRSNRNPNNA ENKRKTKLFL METPLFIASI VIGLLTGLDN
101: YLYSYGLAYL PVSTSSLIIG TQLAFNALFA FLLVKQKFTP FSINAVVLLT VGIGILALHS DGDKPAKESK KEYVVGFLMT VVAALLYAFI LPLVELTYKK
201: ARQEITFPLV LEIQMVMCLA ATFFCVIGMF IVGDFKVIAR EAREFKIGGS VFYYALIVIT GIIWQGFFLG AIGIVFCASS LASGVLISVL LPVTEVFAVV
301: CFREKFQAEK GVSLLLSLWG FVSYFYGEFK SGKKVVDKPQ PPETELPILP VSDYVA

Arabidopsis Description

PUP1Purine permease 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ96]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.