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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum, plasma membrane, peroxisome

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • plastid 1
  • extracellular 1
  • endoplasmic reticulum 2
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, peroxisome, plasma membrane
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
Bra012567.1-P
Bra013361.1-P

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G30840.1 Bra012567.1-P AT4G19030.1 21798944
AT1G30840.1 Bra013361.1-P AT4G19030.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023141.1-P Field mustard plasma membrane 99.74 99.74
CDY02338 Canola plasma membrane 81.07 99.06
CDY09527 Canola plasma membrane 77.75 95.0
CDY09533 Canola plasma membrane 77.49 94.69
AT1G30840.1 Thale cress peroxisome, plasma membrane, vacuole 83.63 85.6
VIT_18s0089g01410.t01 Wine grape plasma membrane 56.52 64.24
PGSC0003DMT400086024 Potato cytosol, endoplasmic reticulum, extracellular 22.51 62.41
Solyc10g005160.1.1 Tomato plasma membrane 56.27 61.62
PGSC0003DMT400090756 Potato endoplasmic reticulum, extracellular, vacuole 21.23 57.64
Solyc10g005150.1.1 Tomato plasma membrane 56.27 57.59
PGSC0003DMT400090938 Potato endoplasmic reticulum, extracellular 23.02 56.6
Solyc10g005170.1.1 Tomato cytosol, peroxisome, plasma membrane 56.78 55.78
KRH37148 Soybean cytosol, peroxisome, plasma membrane 56.78 55.36
GSMUA_Achr6P30590_001 Banana endoplasmic reticulum, peroxisome, plasma membrane 47.57 54.07
KRH37147 Soybean nucleus, peroxisome, plasma membrane 56.27 53.79
KRH12149 Soybean plasma membrane 55.5 53.71
KRH12150 Soybean plasma membrane 49.1 53.63
Solyc02g082170.1.1 Tomato plasma membrane 54.73 52.07
KRH37149 Soybean plasma membrane 53.71 51.6
PGSC0003DMT400035529 Potato cytosol, mitochondrion, peroxisome, plastid 55.75 51.42
TraesCS3A01G267500.1 Wheat plastid 48.08 49.09
TraesCS3B01G300900.1 Wheat plastid 47.57 48.95
GSMUA_Achr3P16440_001 Banana extracellular, peroxisome, plastid 47.31 48.94
TraesCS3D01G267700.1 Wheat plastid 47.83 48.83
GSMUA_Achr9P06170_001 Banana cytosol 46.8 48.67
Os01t0680200-01 Rice cytosol, plasma membrane, vacuole 46.04 46.51
EES01264 Sorghum plasma membrane 46.04 46.51
EES18657 Sorghum mitochondrion 40.92 46.38
Zm00001d043858_P001 Maize vacuole 46.8 46.21
Zm00001d038965_P001 Maize mitochondrion, plastid 43.22 46.17
OQU78406 Sorghum plastid 43.48 46.07
HORVU3Hr1G062690.1 Barley plastid 47.06 46.0
Zm00001d011603_P001 Maize endoplasmic reticulum, plasma membrane, plastid, vacuole 44.76 45.45
Os05t0556800-01 Rice mitochondrion 43.48 44.39
TraesCS1A01G386000.1 Wheat plastid 41.94 43.62
Os01t0504100-01 Rice plasma membrane 41.94 43.27
GSMUA_Achr8P27440_001 Banana mitochondrion 46.55 43.03
TraesCS1B01G413400.1 Wheat plastid 41.69 43.01
TraesCS1D01G394000.1 Wheat plastid 41.43 42.74
TraesCS1D01G393900.1 Wheat plastid 42.71 42.39
HORVU1Hr1G085140.1 Barley endoplasmic reticulum 40.92 42.33
TraesCS1A01G385800.1 Wheat plastid 43.22 41.83
HORVU1Hr1G085120.1 Barley plastid 42.71 41.75
TraesCS1A01G386100.1 Wheat plastid 42.46 41.09
TraesCS1D01G394100.1 Wheat plastid 42.2 40.84
TraesCS1B01G413500.1 Wheat plastid 42.2 40.84
HORVU1Hr1G085230.1 Barley mitochondrion 41.94 40.29
TraesCS1B01G413300.1 Wheat mitochondrion 42.97 39.81
HORVU1Hr1G085150.1 Barley plastid 42.2 38.92
Bra010890.1-P Field mustard plasma membrane 31.46 34.94
Bra005474.1-P Field mustard extracellular, plasma membrane 30.95 34.47
Bra010891.1-P Field mustard plasma membrane 31.2 34.27
Bra036866.1-P Field mustard plasma membrane 32.23 33.51
Bra030078.1-P Field mustard extracellular, plasma membrane 27.88 31.23
Bra037874.1-P Field mustard plasma membrane 23.02 26.95
Bra013292.1-P Field mustard plasma membrane 25.83 25.9
Bra021018.1-P Field mustard plasma membrane 25.32 24.87
Bra036955.1-P Field mustard plasma membrane 26.34 24.82
Bra040925.1-P Field mustard plasma membrane 24.3 24.36
Bra013291.1-P Field mustard plasma membrane 22.25 23.51
Bra040924.1-P Field mustard plasma membrane 23.27 23.27
Bra013290.1-P Field mustard cytosol, extracellular, plasma membrane 25.32 20.71
Bra035469.1-P Field mustard plasma membrane 19.95 19.9
Bra025766.1-P Field mustard plasma membrane 17.14 19.48
Bra032232.1-P Field mustard plasma membrane 18.93 18.93
Bra019981.1-P Field mustard plasma membrane 18.16 18.3
Bra025764.1-P Field mustard plasma membrane 17.39 17.85
Bra039238.1-P Field mustard plastid 24.3 13.01
Bra016495.1-P Field mustard plasma membrane 17.9 11.27
GSMUA_Achr10P... Banana cytosol, extracellular, golgi 1.28 4.27
Protein Annotations
EnsemblPlants:Bra023144.1EnsemblPlants:Bra023144.1-PEnsemblPlantsGene:Bra023144GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF3PFAM:PF16913SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002542472
UniProt:M4E2Z3MapMan:24.2.1.6::::
Description
AT1G30840 (E=1e-133) ATPUP4 | ATPUP4; purine transmembrane transporter
Coordinates
chrA09:-:21306378..21307553
Molecular Weight (calculated)
42994.8 Da
IEP (calculated)
8.512
GRAVY (calculated)
0.419
Length
391 amino acids
Sequence
(BLAST)
001: MSDGRVNADQ QEEGEQQQNL VKAPVKRSLG LLIATYGCLF VGSIASSLLA KYYFVHGGSS RWVSTWVQSA GFPLLLGLIY FPYFVFKTTK RRPFTRFTHR
101: HLLFSVVIGL ILGFNNFLFS WGTSYLPVST SSLLLSTQLI FTLILSVIIV KQKVTFSNLN CVVLLTLSSV LLALGSSQDK PAGLTKTKYF IGFLSTIGAG
201: LLFALYLPVT ERVYRSVYCY AMVMEMQLVM EFSATVFATI GMAFDGGFKE MVKEANQVFT KGPTVYWTVA IFANVVTWQL CFAATSGMVY LTSGITGGIC
301: MTALLAMNVI GGVVVYGDAF GGVKIVSTVL CIWGFSSYVY GIYVKMKKDE KNEKEEEEKG HSGMKTVEDG GEMEVEMGKV KDDVAAADER V
Best Arabidopsis Sequence Match ( AT1G30840.1 )
(BLAST)
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Arabidopsis Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.