Factsheet for TraesCS1D01G394000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G413400.1	Wheat	plastid	98.68	98.68
TraesCS1A01G386000.1	Wheat	plastid	97.63	98.4
HORVU1Hr1G085150.1	Barley	plastid	93.93	83.96
TraesCS1D01G393900.1	Wheat	plastid	86.28	82.99
TraesCS1D01G394100.1	Wheat	plastid	86.54	81.19
EES18657	Sorghum	mitochondrion	68.07	74.78
Os05t0556800-01	Rice	mitochondrion	74.93	74.15
OQU78406	Sorghum	plastid	71.5	73.44
Zm00001d038965_P001	Maize	mitochondrion, plastid	70.71	73.22
TraesCS3D01G267700.1	Wheat	plastid	62.8	62.14
PGSC0003DMT400086024	Potato	cytosol, endoplasmic reticulum, extracellular	16.36	43.97
Solyc10g005160.1.1	Tomato	plasma membrane	40.63	43.14
PGSC0003DMT400090756	Potato	endoplasmic reticulum, extracellular, vacuole	16.36	43.06
VIT_18s0089g01410.t01	Wine grape	plasma membrane	38.79	42.73
Bra023141.1-P	Field mustard	plasma membrane	42.74	41.43
Bra023144.1-P	Field mustard	endoplasmic reticulum, peroxisome, plasma membrane	42.74	41.43
CDY02338	Canola	plasma membrane	34.56	40.94
PGSC0003DMT400090938	Potato	endoplasmic reticulum, extracellular	17.15	40.88
AT1G30840.1	Thale cress	peroxisome, plasma membrane, vacuole	40.63	40.31
CDY09527	Canola	plasma membrane	33.77	40.0
CDY09533	Canola	plasma membrane	33.25	39.38
Solyc10g005150.1.1	Tomato	plasma membrane	39.05	38.74
Solyc10g005170.1.1	Tomato	cytosol, peroxisome, plasma membrane	40.11	38.19
KRH12150	Soybean	plasma membrane	35.62	37.71
Solyc02g082170.1.1	Tomato	plasma membrane	39.84	36.74
KRH37148	Soybean	cytosol, peroxisome, plasma membrane	38.26	36.16
KRH37149	Soybean	plasma membrane	38.79	36.12
KRH12149	Soybean	plasma membrane	38.26	35.89
PGSC0003DMT400035529	Potato	cytosol, mitochondrion, peroxisome, plastid	39.84	35.61
KRH37147	Soybean	nucleus, peroxisome, plasma membrane	38.26	35.45
TraesCS5D01G254100.1	Wheat	plasma membrane	31.93	32.1
TraesCS5D01G254300.1	Wheat	cytosol, peroxisome, plasma membrane	28.76	30.28
TraesCS5D01G437200.1	Wheat	plasma membrane	29.29	28.76
TraesCS5D01G254200.2	Wheat	plasma membrane	30.61	28.29
TraesCS4D01G302100.1	Wheat	plastid	26.65	26.03
TraesCS4D01G302200.1	Wheat	plastid	26.12	25.52
TraesCS4D01G302000.1	Wheat	plastid	26.39	25.38
TraesCS2D01G452100.1	Wheat	plasma membrane	25.07	24.23
TraesCS2D01G452200.1	Wheat	plasma membrane	24.01	23.88
TraesCS2D01G452400.1	Wheat	peroxisome	23.48	23.8
TraesCS2D01G452300.1	Wheat	peroxisome	23.48	23.24
TraesCS5D01G367700.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	25.59	23.15
TraesCS6D01G243400.1	Wheat	golgi, peroxisome, plasma membrane	22.96	22.31
GSMUA_Achr10P...	Banana	cytosol, extracellular, golgi	1.32	4.27

Protein Annotations

EnsemblPlants:TraesCS1D01G394000.1	EnsemblPlantsGene:TraesCS1D01G394000	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:MFS_trans_sf	InterPro:PUP_plant	PANTHER:PTHR31376
PANTHER:PTHR31376:SF7	PFAM:PF16913	SEG:seg	SUPFAM:SSF103473	SUPFAM:SSF103481	TMHMM:TMhelix
MapMan:24.2.1.6	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:-:463325319..463326458

Molecular Weight (calculated)

39652.5 Da

IEP (calculated)

9.312

GRAVY (calculated)

0.645

Length

379 amino acids

Sequence
(BLAST)

001: MARAAMAISS GAAGPAAVAP RRRRSTVLLM ANYAALLVGS VASSLLSRFY FHHGGKNKWV VTLVQSAGFP TLVVAAFLAG RPRPASAPRP FLWFSRRFLA
101: VCLAIGALMG VSNLLFAYST SLLPVSTSSL LLSMQLAFTL VLAVVIVRHP LTFNNLNAVV LMTLCSVLLA LRSGDAGESP NRRGYIIGYI VTLCAAGLFS
201: AYLPVMELVY REAVSGGFIL AVEVQAVMQA MASVEAAVGL AVSRGFSDDV AHWKGSHAVY WVVVATLVVT WQACFMGTAG VIYLTSSLHS GVCMAAVLTA
301: NVIGGVLVFG DPFGPEKAVA TALCVWGLSS YLYGEYTKSK KKAADGQDDG TTLPSAGDDG ESVHKSLTAA ASGETVQTV

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.