Factsheet for TraesCS5D01G254200.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G247700.1	Wheat	plasma membrane	88.54	96.03
TraesCS5B01G244900.1	Wheat	plasma membrane	87.32	94.46
HORVU5Hr1G069960.1	Barley	cytosol, plasma membrane	83.17	79.12
TraesCS5D01G254100.1	Wheat	plasma membrane	65.61	71.35
TraesCS5D01G437200.1	Wheat	plasma membrane	58.78	62.44
TraesCS5D01G254300.1	Wheat	cytosol, peroxisome, plasma membrane	44.39	50.56
KRH72416	Soybean	endoplasmic reticulum, plasma membrane	40.73	48.55
KRH62277	Soybean	cytosol, endoplasmic reticulum, plasma membrane	41.22	47.34
KRH52994	Soybean	cytosol, nucleus, plasma membrane	39.27	46.67
PGSC0003DMT400054207	Potato	plasma membrane	20.0	46.33
VIT_18s0001g06940.t01	Wine grape	endoplasmic reticulum, plasma membrane	39.02	45.58
VIT_18s0001g06950.t01	Wine grape	plasma membrane	38.78	45.56
VIT_18s0001g06910.t01	Wine grape	plasma membrane	38.78	45.3
PGSC0003DMT400036604	Potato	extracellular, plasma membrane	37.56	44.9
PGSC0003DMT400071864	Potato	plasma membrane	37.07	44.57
CDY27947	Canola	plasma membrane	37.8	44.41
Bra010891.1-P	Field mustard	plasma membrane	38.54	44.38
Solyc06g035420.1.1	Tomato	extracellular, plasma membrane	35.61	44.38
CDY35722	Canola	plasma membrane	38.29	44.35
CDY17197	Canola	extracellular, plasma membrane	37.8	44.16
PGSC0003DMT400072048	Potato	extracellular, plasma membrane	29.27	44.12
AT1G28230.1	Thale cress	plasma membrane	38.29	44.1
Bra010890.1-P	Field mustard	plasma membrane	37.8	44.03
CDX90136	Canola	plasma membrane	37.8	44.03
Bra005474.1-P	Field mustard	extracellular, plasma membrane	37.56	43.87
Solyc07g008440.2.1	Tomato	plasma membrane	38.78	43.32
AT2G33750.1	Thale cress	plasma membrane	37.8	43.3
Bra030078.1-P	Field mustard	extracellular, plasma membrane	36.59	42.98
CDX94594	Canola	extracellular, plasma membrane	36.59	42.98
Solyc12g087870.1.1	Tomato	plasma membrane	37.32	42.98
CDY15687	Canola	plasma membrane	31.71	42.9
CDX94595	Canola	plasma membrane	36.34	42.69
PGSC0003DMT400005470	Potato	extracellular, plasma membrane	36.59	42.37
CDY46618	Canola	plasma membrane	23.41	42.29
Solyc04g074870.2.1	Tomato	extracellular, plasma membrane	36.34	42.09
Bra036866.1-P	Field mustard	plasma membrane	38.54	42.02
CDY29741	Canola	plasma membrane	38.54	41.91
AT1G28220.1	Thale cress	plasma membrane	35.85	41.88
CDX90135	Canola	plasma membrane	32.93	41.8
PGSC0003DMT400039797	Potato	mitochondrion	17.8	41.71
CDY35721	Canola	plasma membrane	32.2	41.38
CDY12422	Canola	plasma membrane	37.8	41.22
TraesCS4D01G302200.1	Wheat	plastid	38.78	40.98
PGSC0003DMT400005467	Potato	plasma membrane	35.12	40.91
CDY16284	Canola	plasma membrane	37.56	40.85
CDY72169	Canola	plasma membrane	25.12	40.71
Solyc04g074880.2.1	Tomato	plasma membrane	35.12	40.56
TraesCS4D01G302100.1	Wheat	plastid	37.8	39.95
Solyc12g087880.1.1	Tomato	extracellular, plasma membrane, vacuole	16.34	39.41
TraesCS4D01G302000.1	Wheat	plastid	37.56	39.09
PGSC0003DMT400085139	Potato	mitochondrion	34.39	36.43
TraesCS3D01G267700.1	Wheat	plastid	30.73	32.9
TraesCS1D01G394000.1	Wheat	plastid	28.29	30.61
TraesCS2D01G452400.1	Wheat	peroxisome	27.07	29.68
TraesCS1D01G393900.1	Wheat	plastid	28.05	29.19
TraesCS6D01G243400.1	Wheat	golgi, peroxisome, plasma membrane	27.07	28.46
TraesCS1D01G394100.1	Wheat	plastid	27.32	27.72
TraesCS2D01G452100.1	Wheat	plasma membrane	25.61	26.79
TraesCS2D01G452200.1	Wheat	plasma membrane	24.15	25.98
TraesCS2D01G452300.1	Wheat	peroxisome	23.9	25.59
TraesCS5D01G367700.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	25.61	25.06

Protein Annotations

EnsemblPlants:TraesCS5D01G254200.2	EnsemblPlantsGene:TraesCS5D01G254200	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376	PANTHER:PTHR31376:SF12
PFAM:PF16913	SEG:seg	SUPFAM:SSF103481	TMHMM:TMhelix	MapMan:24.2.1.6	:

Description

No Description!

Coordinates

chr5D:-:360884851..360895305

Molecular Weight (calculated)

44423.0 Da

IEP (calculated)

6.396

GRAVY (calculated)

0.458

Length

410 amino acids

Sequence
(BLAST)

001: MEIEATPLSP QQQAYNDGGG SDQRAGAGTG AKPLYRNPVV VVNFLLMAVG TVCGPLLFRA YFLHGGTRKW LTCLLQTAAW PLLLPPLCVS FFSRRRRQRE
101: ESATEAAPLS LMSGRLLAAT VAIGLVIGII DFLYAYGLAY LPVSTSSILV STQLAFTAVF ALVVVRHRFT AFSVNAVVLL VVGAAMLGLN GGGDRPAGVS
201: RAQYYAGFAM TLGSAALYGL VLPLMELSQA QHAARAGAAV TYTLVLEIQM VIGITATAFS AVGMLVNREF HHLLIKLYFV WPDDDGCRDT ERAQRIFDEP
301: EIPDEARRFD LGEAGYYFML VSSATAFQCF FIGTIGAIFY GSALLAGVIM TLLISVTEVF AVIFFHEPFN GTKGVALAIS IWGFISYFYG EIRTNEQQSN
401: TSTDKEHLDP

Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)

001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C

Arabidopsis Description

PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.