Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G473800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 86.22 | 97.97 |
| TraesCS2A01G452300.1 | Wheat | mitochondrion | 99.23 | 89.02 |
| Zm00001d003417_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 60.46 | 75.72 |
| KXG26473 | Sorghum | cytosol, peroxisome, plasma membrane | 70.15 | 70.51 |
| KXG24673 | Sorghum | peroxisome | 70.66 | 67.56 |
| TraesCS2D01G452300.1 | Wheat | peroxisome | 47.96 | 49.09 |
| TraesCS2D01G452200.1 | Wheat | plasma membrane | 47.45 | 48.82 |
| CDY12545 | Canola | plasma membrane | 36.48 | 47.99 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 34.95 | 45.82 |
| TraesCS2D01G452400.1 | Wheat | peroxisome | 43.37 | 45.45 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 41.58 | 45.03 |
| TraesCS6D01G243400.1 | Wheat | golgi, peroxisome, plasma membrane | 44.64 | 44.87 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 41.33 | 44.38 |
| AT1G44750.1 | Thale cress | plasma membrane | 41.58 | 43.01 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 39.03 | 42.03 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 39.29 | 41.73 |
| Bra037874.1-P | Field mustard | plasma membrane | 35.2 | 41.32 |
| VIT_19s0014g00150.t01 | Wine grape | plasma membrane | 39.29 | 40.63 |
| AT4G08700.1 | Thale cress | plasma membrane | 36.99 | 40.17 |
| Bra036955.1-P | Field mustard | plasma membrane | 42.35 | 40.0 |
| CDY14989 | Canola | plasma membrane | 42.09 | 39.76 |
| CDX71327 | Canola | plasma membrane | 42.09 | 39.66 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 38.01 | 39.21 |
| AT5G41160.1 | Thale cress | plasma membrane | 35.97 | 38.74 |
| KRH13483 | Soybean | plasma membrane | 30.1 | 38.44 |
| CDY54350 | Canola | plasma membrane | 30.61 | 36.14 |
| CDX75141 | Canola | plasma membrane | 30.36 | 35.84 |
| KRH21843 | Soybean | mitochondrion | 38.01 | 35.48 |
| TraesCS5D01G254300.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.57 | 31.11 |
| TraesCS5D01G254100.1 | Wheat | plasma membrane | 26.79 | 27.85 |
| TraesCS4D01G302100.1 | Wheat | plastid | 27.55 | 27.84 |
| TraesCS4D01G302200.1 | Wheat | plastid | 27.3 | 27.58 |
| TraesCS5D01G437200.1 | Wheat | plasma membrane | 27.04 | 27.46 |
| TraesCS4D01G302000.1 | Wheat | plastid | 27.3 | 27.16 |
| TraesCS3D01G267700.1 | Wheat | plastid | 26.53 | 27.15 |
| TraesCS5D01G254200.2 | Wheat | plasma membrane | 26.79 | 25.61 |
| TraesCS1D01G394000.1 | Wheat | plastid | 24.23 | 25.07 |
| TraesCS1D01G393900.1 | Wheat | plastid | 25.0 | 24.87 |
| TraesCS5D01G367700.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 26.53 | 24.82 |
| TraesCS1D01G394100.1 | Wheat | plastid | 25.0 | 24.26 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G452100.1 | EnsemblPlantsGene:TraesCS2D01G452100 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF14 |
| PFAM:PF16913 | SEG:seg | SUPFAM:SSF103481 | TMHMM:TMhelix | MapMan:24.2.1.6 | : |
Description
No Description!
Coordinates
chr2D:-:561845194..561847102
Molecular Weight (calculated)
41665.2 Da
IEP (calculated)
9.628
GRAVY (calculated)
0.461
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSPQEIQLQ IRGSVPEQEE SGHGENGAGP KAAERRRPGT RGVRWWLMVL LDMLIVLCGQ TVATLLGRYY YNSGGNSKWM ATLTISGGSP LLAILLLLTP
101: RDPVGEPRPA AAKMVPIYLG LGTLIGFDNL MYSYALQYLP VSTFALVAAT QLAFNSVTSR LINAQRFTAL IANSVVVLTF SAALLGVGSS SDGTSAADLP
201: RGKYTLGFIL TLSASAVFAL ILSLFEVTFE KAVRGRTLRW VLRVQMCTNF VAATVAVCGL LASGEWRTIP GEMAAFEDGR ARYVATLVGT AVSWQAMSVA
301: TLRLITRVSS LFANVTGTVS LPLVPVFAVV LFGDRMTGIK AVAMLMAVWG FLSYVYQHYL DGRRAAAMGG QGGAAECCVC KARAGGEAAL PA
101: RDPVGEPRPA AAKMVPIYLG LGTLIGFDNL MYSYALQYLP VSTFALVAAT QLAFNSVTSR LINAQRFTAL IANSVVVLTF SAALLGVGSS SDGTSAADLP
201: RGKYTLGFIL TLSASAVFAL ILSLFEVTFE KAVRGRTLRW VLRVQMCTNF VAATVAVCGL LASGEWRTIP GEMAAFEDGR ARYVATLVGT AVSWQAMSVA
301: TLRLITRVSS LFANVTGTVS LPLVPVFAVV LFGDRMTGIK AVAMLMAVWG FLSYVYQHYL DGRRAAAMGG QGGAAECCVC KARAGGEAAL PA
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.