Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_10s0003g03270.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | VIT_10s0003g03270.t01 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 63.95 | 66.58 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 63.42 | 66.57 |
| CDY12545 | Canola | plasma membrane | 51.58 | 65.77 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 50.53 | 64.21 |
| AT1G44750.1 | Thale cress | plasma membrane | 62.89 | 63.06 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 60.26 | 62.91 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 60.79 | 62.6 |
| GSMUA_Achr5P12690_001 | Banana | plasma membrane | 54.74 | 59.6 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 46.84 | 58.94 |
| Bra036955.1-P | Field mustard | plasma membrane | 62.37 | 57.11 |
| CDY14989 | Canola | plasma membrane | 62.11 | 56.87 |
| CDX71327 | Canola | plasma membrane | 61.84 | 56.49 |
| Bra037874.1-P | Field mustard | plasma membrane | 48.95 | 55.69 |
| Zm00001d051504_P001 | Maize | golgi, peroxisome, plasma membrane | 55.53 | 54.95 |
| VIT_19s0014g00150.t01 | Wine grape | plasma membrane | 54.21 | 54.35 |
| Os02t0689200-03 | Rice | plasma membrane | 55.0 | 54.29 |
| TraesCS6B01G289900.1 | Wheat | peroxisome | 54.47 | 53.21 |
| TraesCS6D01G243400.1 | Wheat | golgi, peroxisome, plasma membrane | 54.21 | 52.82 |
| AT4G08700.1 | Thale cress | plasma membrane | 50.0 | 52.63 |
| TraesCS6A01G262900.1 | Wheat | plasma membrane | 53.95 | 52.56 |
| VIT_02s0012g00730.t01 | Wine grape | plasma membrane | 52.89 | 51.67 |
| AT5G41160.1 | Thale cress | plasma membrane | 49.47 | 51.65 |
| CDY54350 | Canola | plasma membrane | 44.47 | 50.9 |
| EES11332 | Sorghum | peroxisome | 50.0 | 50.8 |
| TraesCS5A01G413800.1 | Wheat | peroxisome | 49.74 | 50.53 |
| Zm00001d002515_P001 | Maize | peroxisome | 49.21 | 50.27 |
| TraesCS2D01G452400.1 | Wheat | peroxisome | 49.47 | 50.27 |
| TraesCS2B01G474100.1 | Wheat | peroxisome | 49.47 | 50.27 |
| HORVU2Hr1G105300.1 | Barley | peroxisome | 49.47 | 50.27 |
| CDX75141 | Canola | plasma membrane | 43.68 | 50.0 |
| TraesCS2A01G452600.1 | Wheat | peroxisome | 48.68 | 49.47 |
| HORVU6Hr1G066740.2 | Barley | golgi, mitochondrion | 52.89 | 48.09 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 45.0 | 46.22 |
| Zm00001d003417_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 37.37 | 45.37 |
| TraesCS2D01G452300.1 | Wheat | peroxisome | 43.95 | 43.6 |
| TraesCS2B01G473900.1 | Wheat | plasma membrane | 43.68 | 43.57 |
| TraesCS2A01G452400.1 | Wheat | plasma membrane | 43.68 | 43.46 |
| TraesCS2D01G452200.1 | Wheat | plasma membrane | 43.42 | 43.31 |
| EES05697 | Sorghum | plastid | 56.84 | 43.11 |
| TraesCS2A01G452500.1 | Wheat | peroxisome | 42.89 | 42.12 |
| HORVU2Hr1G105340.1 | Barley | golgi, peroxisome, plasma membrane | 43.16 | 41.94 |
| TraesCS2B01G473800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 37.63 | 41.45 |
| Os09t0548600-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 37.37 | 41.04 |
| KXG27004 | Sorghum | golgi, peroxisome, vacuole | 42.37 | 40.86 |
| HORVU2Hr1G105360.5 | Barley | peroxisome | 44.21 | 40.78 |
| EES11334 | Sorghum | peroxisome | 40.26 | 40.16 |
| HORVU2Hr1G105240.3 | Barley | peroxisome | 43.16 | 39.81 |
| KXG26473 | Sorghum | cytosol, peroxisome, plasma membrane | 40.0 | 38.97 |
| Zm00001d002514_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane | 38.68 | 38.48 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 44.47 | 38.32 |
| KXG24673 | Sorghum | peroxisome | 41.05 | 38.05 |
| TraesCS2D01G452100.1 | Wheat | plasma membrane | 39.21 | 38.01 |
| TraesCS2B01G474000.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.95 | 37.36 |
| EES10997 | Sorghum | plasma membrane | 38.68 | 35.25 |
| TraesCS2A01G452300.1 | Wheat | mitochondrion | 39.74 | 34.55 |
| HORVU5Hr1G019740.1 | Barley | cytosol, plastid | 26.84 | 30.63 |
| VIT_18s0001g06940.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 25.53 | 27.64 |
| VIT_18s0001g06950.t01 | Wine grape | plasma membrane | 25.0 | 27.22 |
| VIT_18s0001g06910.t01 | Wine grape | plasma membrane | 25.0 | 27.07 |
| VIT_18s0089g01410.t01 | Wine grape | plasma membrane | 24.21 | 26.74 |
| VIT_11s0016g00010.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 24.47 | 26.27 |
| VIT_18s0001g06300.t01 | Wine grape | cytosol, endoplasmic reticulum, plasma membrane | 21.32 | 25.63 |
| Zm00001d026042_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 42.89 | 24.22 |
Protein Annotations
| EntrezGene:100258098 | wikigene:100258098 | MapMan:24.2.1.6 | ProteinID:CCB43936 | ProteinID:CCB43936.1 | UniProt:F6GVF3 |
| EMBL:FN594952 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | EntrezGene:LOC100258098 | wikigene:LOC100258098 | PFAM:PF16913 | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF2 | InterPro:PUP_plant | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000210A612 | ArrayExpress:VIT_15s0021g00650 |
| EnsemblPlantsGene:VIT_15s0021g00650 | EnsemblPlants:VIT_15s0021g00650.t01 | RefSeq:XP_002266773 | RefSeq:XP_002266773.1 | SEG:seg | : |
Description
No Description!
Coordinates
chr15:+:10400569..10407192
Molecular Weight (calculated)
41017.0 Da
IEP (calculated)
6.741
GRAVY (calculated)
0.562
Length
380 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSGIPNNGS RSSKNLISFG FLPFLGNRTE EAVSAEPILS KDETLTRQSS FIGLKCWQWW LLVALNIFFL VAGQAAAVLL GRFYYDKGGN SKWMATFVQT
101: AAFPILLIPL FLIPSSKEPS TTTPPSWTIL ASIYIALGVV LAGDNMLYST GLLYLTASTY SLICATQLAF NAVFSFYINS QKFTALILNS VVILSLSASL
201: IAINDDSEGS SGISKGKYAI GIICTLAASA LYSLLLSLMQ LSFEKVIKKE TFSVVLEMQI YTSIVAACAS LVGLFASGEW KTLHGEMNGF GKGRISYVMT
301: LVWTAVAWQV CSVGVVGLIF LVSSLFSNVI STVSLAVVPI ASVMVFHDEM NGVKNYLDDR KAIKAQTGAD DNHPDDSSCC
101: AAFPILLIPL FLIPSSKEPS TTTPPSWTIL ASIYIALGVV LAGDNMLYST GLLYLTASTY SLICATQLAF NAVFSFYINS QKFTALILNS VVILSLSASL
201: IAINDDSEGS SGISKGKYAI GIICTLAASA LYSLLLSLMQ LSFEKVIKKE TFSVVLEMQI YTSIVAACAS LVGLFASGEW KTLHGEMNGF GKGRISYVMT
301: LVWTAVAWQV CSVGVVGLIF LVSSLFSNVI STVSLAVVPI ASVMVFHDEM NGVKNYLDDR KAIKAQTGAD DNHPDDSSCC
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.