Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| plasma membrane:
27800704
plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os01t0210700-02 | |
| Os01t0756700-01 | |
| Os02t0245800-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | Os01t0210700-02 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | Os01t0756700-01 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | Os02t0245800-01 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d051504_P001 | Maize | golgi, peroxisome, plasma membrane | 82.6 | 82.81 |
| TraesCS6B01G289900.1 | Wheat | peroxisome | 82.08 | 81.23 |
| TraesCS6D01G243400.1 | Wheat | golgi, peroxisome, plasma membrane | 81.3 | 80.26 |
| TraesCS6A01G262900.1 | Wheat | plasma membrane | 81.04 | 80.0 |
| HORVU6Hr1G066740.2 | Barley | golgi, mitochondrion | 79.74 | 73.44 |
| GSMUA_Achr5P12690_001 | Banana | plasma membrane | 60.52 | 66.76 |
| EES05697 | Sorghum | plastid | 82.08 | 63.07 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 58.44 | 61.64 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 57.4 | 61.05 |
| CDY12545 | Canola | plasma membrane | 45.45 | 58.72 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 44.94 | 57.86 |
| AT1G44750.1 | Thale cress | plasma membrane | 56.62 | 57.52 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 53.25 | 56.32 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 53.77 | 56.1 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 54.29 | 55.0 |
| VIT_19s0014g00150.t01 | Wine grape | plasma membrane | 52.47 | 53.3 |
| Bra037874.1-P | Field mustard | plasma membrane | 45.19 | 52.1 |
| CDY14989 | Canola | plasma membrane | 54.81 | 50.84 |
| KRH13483 | Soybean | plasma membrane | 40.52 | 50.81 |
| Bra036955.1-P | Field mustard | plasma membrane | 54.55 | 50.6 |
| CDX71327 | Canola | plasma membrane | 54.55 | 50.48 |
| AT4G08700.1 | Thale cress | plasma membrane | 46.49 | 49.58 |
| Os09t0548600-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 44.16 | 49.13 |
| AT5G41160.1 | Thale cress | plasma membrane | 46.23 | 48.9 |
| CDY54350 | Canola | plasma membrane | 40.78 | 47.29 |
| Os04t0587500-01 | Rice | cytosol, peroxisome | 45.71 | 46.56 |
| CDX75141 | Canola | plasma membrane | 39.48 | 45.78 |
| KRH21843 | Soybean | mitochondrion | 48.31 | 44.29 |
| Os04t0587400-01 | Rice | plasma membrane | 45.19 | 42.65 |
| Os09t0467400-03 | Rice | plasma membrane | 29.35 | 31.3 |
| Os09t0467300-02 | Rice | cytosol, endoplasmic reticulum, plasma membrane | 30.39 | 30.0 |
| Os09t0557500-01 | Rice | cytosol, peroxisome, plastid | 28.31 | 28.09 |
| Os03t0187800-01 | Rice | plastid | 27.53 | 26.57 |
| Os05t0556800-01 | Rice | mitochondrion | 25.45 | 25.59 |
| Os01t0504100-01 | Rice | plasma membrane | 24.68 | 25.07 |
| Os01t0680200-01 | Rice | cytosol, plasma membrane, vacuole | 24.94 | 24.81 |
| Os04t0587300-01 | Rice | peroxisome | 0.52 | 0.53 |
Protein Annotations
| EnsemblPlants:Os02t0689200-03 | EnsemblPlantsGene:Os02g0689200 | EntrezGene:4330368 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF31 | PFAM:PF16913 | ProteinID:BAD07671.1 | ProteinID:BAS80365.1 | RefSeq:XP_015626569.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0000236787 | UniProt:Q6ZGZ0 | MapMan:24.2.1.6 | : | : |
Description
PURINE PERMEASE 11Protein of unknown function DUF250 domain containing protein. (Os02t0689200-01);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-02);Similar to cDNA clone:J023134O11, full insert sequence. (Os02t0689200-03)
Coordinates
chr2:+:28267390..28269626
Molecular Weight (calculated)
41961.2 Da
IEP (calculated)
6.798
GRAVY (calculated)
0.545
Length
385 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGDSGNSDG GSNRDEEVQI QIADSSKAAT SSTHEVPIQN SPVKSWQWWL MVGVNMFFLI AGQTASTLLG RFYYNQGGNS KWMSTFVQTA GFPILFIALF
101: LFHSKTSSTQ TVTSSPAPTI SIPKITLIYV VLGLIIAADD LMYSYGLLYL PVSTYSLICA SQLAFNAVFS YFLNAQKFTP LIFNSVVLLT FSASLLGVDE
201: DSQGTTSISH GKYILGFLLT LGASATYSLI LSLMQVTFEK VIKRETFSVV LNMQIYTALV ATLASLVGLF ASGEWMTLQG EMHAFQSGKL SYVMTLLWTA
301: ISWQVASVGV VGLIFVVSSL FSNVISTLAL PIIPVFAVIF FHDKMDGVKI IAMLMAIWGF MSYGHQLYVD GKKGRKTTVS VEETS
101: LFHSKTSSTQ TVTSSPAPTI SIPKITLIYV VLGLIIAADD LMYSYGLLYL PVSTYSLICA SQLAFNAVFS YFLNAQKFTP LIFNSVVLLT FSASLLGVDE
201: DSQGTTSISH GKYILGFLLT LGASATYSLI LSLMQVTFEK VIKRETFSVV LNMQIYTALV ATLASLVGLF ASGEWMTLQG EMHAFQSGKL SYVMTLLWTA
301: ISWQVASVGV VGLIFVVSSL FSNVISTLAL PIIPVFAVIF FHDKMDGVKI IAMLMAIWGF MSYGHQLYVD GKKGRKTTVS VEETS
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.