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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, secretory
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS3A01G132400.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G294000.1
TraesCS6A01G160500.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G41160.1 TraesCS3A01G132400.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3A01G294200.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3B01G167100.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3B01G328800.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3D01G148600.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS3D01G294000.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6A01G160500.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6B01G190900.1 AT5G46240.1 15299147
AT5G41160.1 TraesCS6D01G152200.1 AT5G46240.1 15299147
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G243400.1 Wheat golgi, peroxisome, plasma membrane 98.21 98.21
TraesCS6B01G289900.1 Wheat peroxisome 97.95 98.2
HORVU6Hr1G066740.2 Barley golgi, mitochondrion 88.97 83.01
Zm00001d051504_P001 Maize golgi, peroxisome, plasma membrane 80.26 81.51
Os02t0689200-03 Rice plasma membrane 80.0 81.04
GSMUA_Achr5P12690_001 Banana plasma membrane 58.72 65.62
EES05697 Sorghum plastid 80.51 62.67
TraesCS5A01G413800.1 Wheat peroxisome 58.97 61.5
TraesCS2A01G452600.1 Wheat peroxisome 57.95 60.43
KRH00977 Soybean endoplasmic reticulum, plasma membrane, vacuole 54.1 57.81
KRH40250 Soybean endoplasmic reticulum, plasma membrane, vacuole 53.59 57.73
CDY12545 Canola plasma membrane 43.08 56.38
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 42.31 55.18
Solyc01g088550.2.1 Tomato plasma membrane 51.03 54.67
PGSC0003DMT400004320 Potato plasma membrane 51.54 54.47
VIT_15s0021g00650.t01 Wine grape plastid 52.56 53.95
AT1G44750.1 Thale cress plasma membrane 52.31 53.83
VIT_19s0014g00150.t01 Wine grape plasma membrane 50.0 51.45
Bra037874.1-P Field mustard plasma membrane 43.59 50.9
TraesCS2A01G452400.1 Wheat plasma membrane 48.72 49.74
AT4G08700.1 Thale cress plasma membrane 45.64 49.31
KRH13483 Soybean plasma membrane 38.72 49.19
AT5G41160.1 Thale cress plasma membrane 44.87 48.08
CDY14989 Canola plasma membrane 51.03 47.95
TraesCS2A01G452500.1 Wheat peroxisome 47.44 47.8
Bra036955.1-P Field mustard plasma membrane 50.77 47.71
CDX71327 Canola plasma membrane 50.77 47.6
CDY54350 Canola plasma membrane 39.74 46.69
CDX75141 Canola plasma membrane 38.21 44.88
KRH21843 Soybean mitochondrion 46.67 43.33
TraesCS2A01G452300.1 Wheat mitochondrion 45.38 40.5
TraesCS5A01G247800.1 Wheat cytosol, peroxisome, plasma membrane 28.97 31.3
TraesCS5A01G247600.1 Wheat plasma membrane 28.72 29.71
TraesCS5A01G247700.1 Wheat plasma membrane 28.46 29.37
TraesCS4A01G404400.1 Wheat plastid 27.18 27.18
TraesCS5A01G429100.1 Wheat plasma membrane 26.67 27.01
TraesCS3A01G267500.1 Wheat plastid 25.64 26.11
TraesCS5A01G358700.2 Wheat cytosol, endoplasmic reticulum, plastid 26.41 25.75
TraesCS4A01G404300.1 Wheat plastid 25.64 25.58
TraesCS4A01G404200.1 Wheat plastid 25.64 25.58
TraesCS4A01G404100.1 Wheat plastid 25.64 25.45
TraesCS1A01G386000.1 Wheat plastid 22.31 23.14
TraesCS1A01G385800.1 Wheat plastid 23.08 22.28
TraesCS1A01G386100.1 Wheat plastid 23.08 22.28
Protein Annotations
EnsemblPlants:TraesCS6A01G262900.1EnsemblPlantsGene:TraesCS6A01G262900GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF31
PFAM:PF16913SEG:segTMHMM:TMhelixMapMan:24.2.1.6::
Description
No Description!
Coordinates
chr6A:+:486005182..486007437
Molecular Weight (calculated)
42190.1 Da
IEP (calculated)
5.636
GRAVY (calculated)
0.498
Length
390 amino acids
Sequence
(BLAST)
001: MAGDDGNGNS SAVRGGGGGS GQEEVQIEIA GSSKPAVSLA HEAPPQSAPV KHWQWWLMVV LNMFFLVAGQ TSATLLGRFY YNEGGNSKWL STFVQTAGFP
101: VLFVAQFLFR PKSPSTQATT SGPEASITKI TLIYIALGLI IAADDLMYSY GLLYLPVSTY SLVCASQLAF NAVFSYFLNA QKFTPLIFNS VLLLTFSASL
201: LGVDEDSPSS SDISQGNHVL GFVLTLGASA TYSLILSLMQ VTFEKVIKRE TFSVVLNMQI YTAFVATLAS LVGLFASGEW KTLEGEMHMF SPGKVSYVMT
301: VLWTAISWQI ASVGVVGLIF VVSSLFSNVI STLALPIIPV FAVIFFHDKM DGIKIIAMLI AIWGFISYGY QLYVDDKKSR KTSSSVEENS
Best Arabidopsis Sequence Match ( AT1G44750.1 )
(BLAST)
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.