Factsheet for TraesCS6B01G190900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 3
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	peroxisome, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G267900.1
TraesCS1B01G278600.1
TraesCS1D01G267800.1
TraesCS2A01G452300.1
TraesCS2A01G452400.1
TraesCS2A01G452500.1
TraesCS2A01G452600.1
TraesCS2B01G473800.1
TraesCS2B01G473900.1
TraesCS2B01G474000.1
TraesCS2B01G474100.1
TraesCS2D01G452100.1
TraesCS2D01G452200.1
TraesCS2D01G452300.1
TraesCS2D01G452400.1
TraesCS3A01G132400.1
TraesCS3A01G233800.1
TraesCS3A01G294200.1
TraesCS3B01G167100.1
TraesCS3B01G265500.1
TraesCS3B01G328800.1
TraesCS3D01G148600.1
TraesCS3D01G219600.1
TraesCS3D01G294000.1
TraesCS5A01G413800.1
TraesCS6A01G160500.1
TraesCS6A01G262900.1
TraesCS6B01G081300.1
TraesCS6B01G190900.1
TraesCS6B01G289900.1
TraesCS6D01G152200.1
TraesCS6D01G243400.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	TraesCS3A01G233800.1	AT2G26650.1	15299147
AT5G46240.1	TraesCS3B01G265500.1	AT2G26650.1	15299147
AT5G46240.1	TraesCS3D01G219600.1	AT2G26650.1	15299147
AT5G46240.1	TraesCS1A01G267900.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS1B01G278600.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS1D01G267800.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS6B01G081300.1	AT4G22200.1	12034902
AT5G46240.1	TraesCS1A01G267900.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS1B01G278600.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS1D01G267800.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS6B01G081300.1	AT4G22200.1	15299147
AT5G46240.1	TraesCS1A01G267900.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS1B01G278600.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS1D01G267800.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS6B01G081300.1	AT4G22200.1	17085433
AT5G46240.1	TraesCS2A01G452300.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2A01G452400.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2A01G452500.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2A01G452600.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G473800.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G473900.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G474000.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2B01G474100.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452100.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452200.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452300.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS2D01G452400.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS5A01G413800.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS6A01G262900.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS6B01G289900.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS6D01G243400.1	AT5G41160.1	15299147
AT5G46240.1	TraesCS3A01G132400.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3A01G294200.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3B01G167100.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3B01G328800.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3D01G148600.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3D01G294000.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS6A01G160500.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS6B01G190900.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS6D01G152200.1	AT5G46240.1	11042178
AT5G46240.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS6D01G152200.1	AT5G46240.1	15299147
AT5G46240.1	TraesCS3A01G132400.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3A01G294200.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3B01G167100.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3B01G328800.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3D01G148600.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS3D01G294000.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS6A01G160500.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS6B01G190900.1	AT5G46240.1	17085433
AT5G46240.1	TraesCS6D01G152200.1	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G152200.1	Wheat	plasma membrane	96.69	96.56
TraesCS6A01G160500.1	Wheat	plasma membrane	96.41	96.28
EES06576	Sorghum	plasma membrane	76.83	76.41
Os02t0245800-01	Rice	plasma membrane	75.31	76.04
Zm00001d016160_P001	Maize	plasma membrane	69.52	72.41
Zm00001d053446_P001	Maize	plastid	73.93	70.71
TraesCS3B01G328800.1	Wheat	plasma membrane	42.62	61.19
GSMUA_Achr10P...	Banana	plasma membrane	54.21	59.82
GSMUA_Achr7P09360_001	Banana	plasma membrane	52.14	58.15
CDY03233	Canola	plasma membrane	49.79	55.03
CDY35154	Canola	plasma membrane	49.52	54.64
Bra017567.1-P	Field mustard	plasma membrane	49.52	54.64
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	51.03	54.33
AT5G46240.1	Thale cress	plasma membrane	49.52	53.03
CDY33464	Canola	cytosol, plasma membrane, plastid	48.41	52.7
CDX99479	Canola	plasma membrane	49.79	52.7
CDX78839	Canola	plasma membrane	49.52	52.49
CDY62359	Canola	cytosol, plasma membrane, plastid	48.14	52.4
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	48.14	52.4
Bra013296.1-P	Field mustard	plasma membrane	49.38	52.11
KRH44805	Soybean	plasma membrane	51.03	50.82
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	49.52	50.71
Solyc02g070530.2.1	Tomato	nucleus	47.72	50.29
PGSC0003DMT400054339	Potato	plasma membrane	47.45	50.0
TraesCS3B01G167100.1	Wheat	plasma membrane	48.69	49.1
VIT_10s0003g03270.t01	Wine grape	plasma membrane	53.1	48.67
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	45.38	47.75
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	44.97	47.73
CDX76529	Canola	plasma membrane	46.07	46.91
KRH11194	Soybean	plasma membrane	50.21	46.85
KRH21063	Soybean	plasma membrane	50.21	46.85
Bra021012.1-P	Field mustard	plasma membrane	45.93	46.77
CDY34066	Canola	endoplasmic reticulum, plasma membrane	34.76	41.65
KRH58233	Soybean	cytosol, extracellular, plasma membrane	12.14	39.64
Solyc03g058900.1.1	Tomato	cytosol	10.34	38.46
TraesCS3B01G265500.1	Wheat	plasma membrane	44.55	36.01
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	40.41	33.87
PGSC0003DMT400054318	Potato	nucleus	14.62	33.65
TraesCS3B01G274500.1	Wheat	plastid	29.79	33.38
TraesCS6B01G081300.1	Wheat	plastid	38.48	33.37
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	11.86	29.76
TraesCS2B01G329800.1	Wheat	plasma membrane	24.97	25.03
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	28.0	24.31
TraesCS7B01G106600.1	Wheat	cytosol	23.72	23.43
TraesCS7B01G106800.1	Wheat	cytosol	17.24	21.26

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom
InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463
PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF551	InterPro:RmlC-like_jellyroll	SMART:SM00100
SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G190900	EnsemblPlants:TraesCS6B01G190900.1	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	TIGR:cd00038	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr6B:+:224253616..224257150

Molecular Weight (calculated)

83578.4 Da

IEP (calculated)

7.975

GRAVY (calculated)

-0.197

Length

725 amino acids

Sequence
(BLAST)

001: MTQAHSKSHF HQFWDGLHIN GSSDSFAIEL LPSLGATINH SNKLKKFIVS PYDPRYRFWE LFLIVLVVYS AWVCPFELAF LRNLPSKLVL VENIVNGFFA
101: IDIVMTFFVA YVDSKTHLLV DDRKRIAVRY LSTWFIFDVC STAPFQPIIL LFTHKGNDLS FKVLNLLRLW RLNRVSTLFA RLEKDIRFNY FWTRCSKLIS
201: VTLFAVHCAG CFNYMLADRY PYPENTWIGA VMPTFRSENL WTRYVTALYW SITTLTTTGY GDLHAENPRE MLFDIFYMLF NLGLTAYLIG NMTNLVVHGT
301: SRTQKFRDSI YAASEFAARN QLPVSIKEQM LSHFCLQFKT EGYNQKTMLN GLPKGIRSSI AYSLFFPILR RAYLFHGVSN SFIAELVMEV QPEYFPPKED
401: IILQNEGAAD IYLIVSGAVN MITTINGNEQ VYAKVTNGDM FGEVGALCNI PQPFTFRTAE LSQLLRISRI RLREAIQNHR EDSDILMNNL FQKLKLPENS
501: PEVNQPDRRF LSKYDLFHIS REERMLQWPH QHYTEQKSID LGSKVPISGD GPDSTKLFRQ VPQQEDIHNK SNCRYRLSDG MVDKEEDLNE VRINCETESA
601: EEFCIRIKSE DKTAASSQQT ILTKMQPGSP HRTSENISRS IYQDYSGIKA SNKRVTIHIY PHNATGSTVQ NGKLINLPGS LDELIKIGRH KFPDFHPTKV
701: VSRDYAEIDD IGVIRDGDHI FFLQI

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.