Factsheet for TraesCS1B01G278600.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 3
mitochondrion 1
plasma membrane 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G267900.1
TraesCS1B01G278600.1
TraesCS1D01G267800.1
TraesCS3A01G132400.1
TraesCS3A01G233800.1
TraesCS3A01G245200.1
TraesCS3A01G294200.1
TraesCS3A01G362200.1
TraesCS3B01G167100.1
TraesCS3B01G265500.1
TraesCS3B01G274500.1
TraesCS3B01G328800.1
TraesCS3B01G394600.3
TraesCS3D01G148600.1
TraesCS3D01G219600.1
TraesCS3D01G246300.1
TraesCS3D01G294000.1
TraesCS3D01G355900.1
TraesCS4A01G094300.1
TraesCS4B01G210100.1
TraesCS4D01G210900.1
TraesCS5A01G183600.1
TraesCS5B01G182000.1
TraesCS5D01G188600.1
TraesCS6A01G160500.1
TraesCS6B01G081300.1
TraesCS6B01G190900.1
TraesCS6D01G152200.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22200.1	TraesCS3A01G233800.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3B01G265500.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3D01G219600.1	AT2G26650.1	12678562
AT4G22200.1	TraesCS3A01G233800.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3B01G265500.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3D01G219600.1	AT2G26650.1	15299147
AT4G22200.1	TraesCS3A01G362200.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS3B01G394600.3	AT3G11410.1	11181729
AT4G22200.1	TraesCS3D01G355900.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4A01G094300.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4B01G210100.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS4D01G210900.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5A01G183600.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5B01G182000.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS5D01G188600.1	AT3G11410.1	11181729
AT4G22200.1	TraesCS3A01G362200.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS3B01G394600.3	AT3G11410.1	12034902
AT4G22200.1	TraesCS3D01G355900.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4A01G094300.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4B01G210100.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS4D01G210900.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5A01G183600.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5B01G182000.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS5D01G188600.1	AT3G11410.1	12034902
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	12678562
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	15299147
AT4G22200.1	TraesCS1A01G267900.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS1B01G278600.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS1D01G267800.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS6B01G081300.1	AT4G22200.1	17085433
AT4G22200.1	TraesCS3A01G245200.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3B01G274500.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3D01G246300.1	AT4G32650.1	12678562
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	12034902
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	15299147
AT4G22200.1	TraesCS3A01G132400.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3A01G294200.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3B01G167100.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3B01G328800.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3D01G148600.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS3D01G294000.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6A01G160500.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6B01G190900.1	AT5G46240.1	17085433
AT4G22200.1	TraesCS6D01G152200.1	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G267800.1	Wheat	plastid	97.46	97.46
TraesCS1A01G267900.1	Wheat	plastid	95.72	95.39
HORVU1Hr1G065250.2	Barley	plastid	91.1	88.74
TraesCS6B01G081300.1	Wheat	plastid	81.85	84.69
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	62.08	77.27
Os05t0428700-01	Rice	cytosol, plastid	50.17	76.68
Zm00001d010210_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	61.5	76.11
EES19575	Sorghum	plastid	71.21	73.6
Zm00001d010209_P001	Maize	plastid	11.91	73.57
KXG22062	Sorghum	plastid	13.41	72.96
KXG22064	Sorghum	plastid	70.52	72.45
Zm00001d038252_P001	Maize	plastid	72.49	67.13
GSMUA_Achr6P24240_001	Banana	cytosol	60.92	65.88
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	59.77	62.74
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	57.8	59.59
KRH26375	Soybean	cytosol	57.23	59.57
CDX79135	Canola	plasma membrane	53.99	59.26
KRH44060	Soybean	cytosol	56.53	58.63
AT4G22200.1	Thale cress	cytosol, plastid, vacuole	53.64	57.86
Solyc01g104030.2.1	Tomato	cytosol	54.1	55.91
PGSC0003DMT400061090	Potato	cytosol	53.06	55.7
PGSC0003DMT400062100	Potato	plasma membrane	53.06	54.51
Bra013599.1-P	Field mustard	cytosol	53.99	54.18
CDX82921	Canola	cytosol	53.64	53.83
Solyc10g024360.1.1	Tomato	cytosol	52.14	53.63
TraesCS3B01G328800.1	Wheat	plasma membrane	28.21	48.32
TraesCS6B01G190900.1	Wheat	plasma membrane	33.87	40.41
TraesCS3B01G167100.1	Wheat	plasma membrane	32.6	39.22
TraesCS3B01G265500.1	Wheat	plasma membrane	39.19	37.79
TraesCS2B01G329800.1	Wheat	plasma membrane	25.78	30.84
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	28.32	29.34
TraesCS3B01G274500.1	Wheat	plastid	21.85	29.21
TraesCS7B01G106600.1	Wheat	cytosol	24.28	28.61
TraesCS7B01G106800.1	Wheat	cytosol	18.84	27.72

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom
InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683
InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088
PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF493	InterPro:RmlC-like_jellyroll	SMART:SM00100
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G278600
EnsemblPlants:TraesCS1B01G278600.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038	TIGR:cd00204	SEG:seg

Description

No Description!

Coordinates

chr1B:-:486969330..486975457

Molecular Weight (calculated)

96045.9 Da

IEP (calculated)

8.165

GRAVY (calculated)

-0.035

Length

865 amino acids

Sequence
(BLAST)

001: MKISSIKSTS SGGTSAASGS STGFGSGSGA SRSFNLRNLS KLMLPPLGSS LSQSTSDSDK RVVSPLDSRY RCWETFMVIL VAYSAWVYPF EVAFMDARPK
101: GGLEVADMVV DIFFAVDIVL TFFVAYIDSR TQLLVRDRRR ITFRYLSTFF IMDVASTIPY QGIAYLVNGE VREGMVYSLL GLLRLWRLRK VKQFFTRLEK
201: DIRFSYFWVR CARLIAVTLF LVHCAGCLYY LLADRYPDRD KTWIGAVIPN FRQESLWIRY ISSIYWSITT MTTVGYGDLH AQNNLEMIFN IFYMLFNLGL
301: TAYLIGNMTN LVVEGTRRTM EFRNSIRAAS NFVCRNHLPP RLQQQILAYM CLKFRAESLN QQQLMDQLPK SICKSICEHL FLPVVKEVYL FKGISREAQL
401: LLVTKTKPEY IPPKEDVIVQ NEAADDVYVV VSGEVEIIYF NGEREEVMGK LGTMDIFGEV SALSDRPQTF TFRTRTLSQL LRLKQATLRE VMQSKPDDSA
501: LIVRNFLKHQ IEVHDMKDLL GESTGAGGSG NIVPCNLLTV AATGNAGFLE DLLKVGMDPD VGDSKGRTAL HIAASKRYEG CVQALLMHGC NVHIKDAQGN
601: TALWQAIAAR HHKVFSNLYH IARVSNPRAG GDLLCLAARR GDVDTLRELL KHGLDVDSED HDGATALRVA LSEGQADAAR FLVMSGASMD KADLDGDGSA
701: PRQTTVPAAE LRELVKRREV GHPITIYDSP ASTVTAASSS SGELRQGRLQ GSARSDSAHW PRVSIYKGHP FVRNHSSEAG KLINLPATME GFKTIIGEKL
801: KVDAEKALIL NGEGAEIDSL DVIRDNDKLF IVTEEHMRMV ASMDSSVALS HTSSVGSAVS VAHVI

Best Arabidopsis Sequence Match ( AT4G22200.1 )
(BLAST)

001: MDLKYSASHC NLSSDMKLRR FHQHRGKGRE EEYDASSLSL NNLSKLILPP LGVASYNQNH IRSSGWIISP MDSRYRCWEF YMVLLVAYSA WVYPFEVAFL
101: NSSPKRNLCI ADNIVDLFFA VDIVLTFFVA YIDERTQLLV REPKQIAVRY LSTWFLMDVA STIPFDAIGY LITGTSTLNI TCNLLGLLRF WRLRRVKHLF
201: TRLEKDIRYS YFWIRCFRLL SVTLFLVHCA GCSYYLIADR YPHQGKTWTD AIPNFTETSL SIRYIAAIYW SITTMTTVGY GDLHASNTIE MVFITVYMLF
301: NLGLTAYLIG NMTNLVVEGT RRTMEFRNSI EAASNFVNRN RLPPRLKDQI LAYMCLRFKA ESLNQQHLID QLPKSIYKSI CQHLFLPSVE KVYLFKGVSR
401: EILLLLVSKM KAEYIPPRED VIMQNEAPDD VYIIVSGEVE IIDSEMERES VLGTLRCGDI FGEVGALCCR PQSYTFQTKS LSQLLRLKTS FLIETMQIKQ
501: QDNATMLKNF LQHHKKLSNL DIGDLKAQQN GENTDVVPPN IASNLIAVVT TGNAALLDEL LKAKLSPDIT DSKGKTPLHV AASRGYEDCV LVLLKHGCNI
601: HIRDVNGNSA LWEAIISKHY EIFRILYHFA AISDPHIAGD LLCEAAKQNN VEVMKALLKQ GLNVDTEDHH GVTALQVAMA EDQMDMVNLL ATNGADVVCV
701: NTHNEFTPLE KLRVVEEEEE EERGRVSIYR GHPLERRERS CNEAGKLILL PPSLDDLKKI AGEKFGFDGS ETMVTNEDGA EIDSIEVIRD NDKLYFVVNK
801: II

Arabidopsis Description

AKT2Potassium channel AKT2/3 [Source:UniProtKB/Swiss-Prot;Acc:Q38898]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.