Factsheet for Zm00001d038252_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
cytosol 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 2
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid, secretory
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005609_P001
Zm00001d010209_P001
Zm00001d010210_P001
Zm00001d011473_P003
Zm00001d011723_P002
Zm00001d011729_P002
Zm00001d012401_P001
Zm00001d012717_P002
Zm00001d016160_P001
Zm00001d016987_P001
Zm00001d020100_P001
Zm00001d028574_P001
Zm00001d038252_P001
Zm00001d039386_P001
Zm00001d042886_P001
Zm00001d044056_P003
Zm00001d053446_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22200.1	Zm00001d011473_P003	AT2G26650.1	12678562
AT4G22200.1	Zm00001d044056_P003	AT2G26650.1	12678562
AT4G22200.1	Zm00001d011473_P003	AT2G26650.1	15299147
AT4G22200.1	Zm00001d044056_P003	AT2G26650.1	15299147
AT4G22200.1	Zm00001d005609_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d012401_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d020100_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d028574_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d042886_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d005609_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d012401_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d020100_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d028574_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d042886_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d010209_P001	AT4G22200.1	12678562
AT4G22200.1	Zm00001d010210_P001	AT4G22200.1	12678562
AT4G22200.1	Zm00001d038252_P001	AT4G22200.1	12678562
AT4G22200.1	Zm00001d010209_P001	AT4G22200.1	15299147
AT4G22200.1	Zm00001d010210_P001	AT4G22200.1	15299147
AT4G22200.1	Zm00001d038252_P001	AT4G22200.1	15299147
AT4G22200.1	Zm00001d010209_P001	AT4G22200.1	17085433
AT4G22200.1	Zm00001d010210_P001	AT4G22200.1	17085433
AT4G22200.1	Zm00001d038252_P001	AT4G22200.1	17085433
AT4G22200.1	Zm00001d011723_P002	AT4G32650.1	12678562
AT4G22200.1	Zm00001d011729_P002	AT4G32650.1	12678562
AT4G22200.1	Zm00001d016987_P001	AT4G32650.1	12678562
AT4G22200.1	Zm00001d012717_P002	AT5G46240.1	12034902
AT4G22200.1	Zm00001d016160_P001	AT5G46240.1	12034902
AT4G22200.1	Zm00001d039386_P001	AT5G46240.1	12034902
AT4G22200.1	Zm00001d053446_P001	AT5G46240.1	12034902
AT4G22200.1	Zm00001d012717_P002	AT5G46240.1	15299147
AT4G22200.1	Zm00001d016160_P001	AT5G46240.1	15299147
AT4G22200.1	Zm00001d039386_P001	AT5G46240.1	15299147
AT4G22200.1	Zm00001d053446_P001	AT5G46240.1	15299147
AT4G22200.1	Zm00001d012717_P002	AT5G46240.1	17085433
AT4G22200.1	Zm00001d016160_P001	AT5G46240.1	17085433
AT4G22200.1	Zm00001d039386_P001	AT5G46240.1	17085433
AT4G22200.1	Zm00001d053446_P001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	67.99	91.37
Zm00001d010210_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	67.02	89.56
EES19575	Sorghum	plastid	77.19	86.14
KXG22064	Sorghum	plastid	76.87	85.27
Zm00001d010209_P001	Maize	plastid	12.53	83.57
Os05t0428700-01	Rice	cytosol, plastid	45.72	75.44
TraesCS1D01G267800.1	Wheat	plastid	67.67	73.06
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	67.13	72.49
TraesCS1A01G267900.1	Wheat	plastid	66.7	71.77
HORVU1Hr1G065250.2	Barley	plastid	66.81	70.27
TraesCS6B01G081300.1	Wheat	plastid	61.24	68.42
GSMUA_Achr6P24240_001	Banana	cytosol	54.5	63.62
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	52.57	59.59
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	52.89	58.88
KRH26375	Soybean	cytosol	51.71	58.12
AT4G22200.1	Thale cress	cytosol, plastid, vacuole	49.57	57.73
CDX79135	Canola	plasma membrane	48.61	57.61
KRH44060	Soybean	cytosol	51.39	57.55
PGSC0003DMT400061090	Potato	cytosol	48.29	54.73
Solyc01g104030.2.1	Tomato	cytosol	48.82	54.48
PGSC0003DMT400062100	Potato	plasma membrane	47.97	53.21
Bra013599.1-P	Field mustard	cytosol	48.61	52.67
Solyc10g024360.1.1	Tomato	cytosol	47.32	52.56
CDX82921	Canola	cytosol	48.29	52.32
Zm00001d016160_P001	Maize	plasma membrane	29.12	39.08
Zm00001d053446_P001	Maize	plastid	30.84	37.99
Zm00001d044056_P003	Maize	plasma membrane, plastid	35.01	36.87
Zm00001d016987_P001	Maize	plasma membrane	22.7	35.99
Zm00001d039386_P001	Maize	plasma membrane	24.63	35.49
Zm00001d011473_P003	Maize	plastid	34.58	35.38
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	24.2	35.31
Zm00001d011729_P002	Maize	cytosol	23.45	34.6
Zm00001d018918_P001	Maize	plastid	33.08	33.26
Zm00001d003555_P001	Maize	plasma membrane	23.13	28.99
Zm00001d037289_P002	Maize	cytosol	26.23	28.1
Zm00001d044717_P001	Maize	cytosol	26.12	27.76
Zm00001d012717_P002	Maize	plasma membrane	29.02	26.29
Zm00001d018924_P001	Maize	cytosol	9.42	19.73

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	EntrezGene:100281406	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A1D6M4T0
ProteinID:AQK86137.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006810	GO:GO:0006811	GO:GO:0008150
GO:GO:0009506	GO:GO:0009719	GO:GO:0009737	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220
GO:GO:0042391	GO:GO:0042802	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710
InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	PFAM:PF00027
PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PFscan:PS50042	PFscan:PS50088	PFscan:PS50297
PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF493	InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248
SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI00084562FF	EnsemblPlantsGene:Zm00001d038252
EnsemblPlants:Zm00001d038252_P001	EnsemblPlants:Zm00001d038252_T001	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:

Description

potassium channel2 potassium channel2

Coordinates

chr6:-:152420069..152431280

Molecular Weight (calculated)

103458.0 Da

IEP (calculated)

7.030

GRAVY (calculated)

-0.133

Length

934 amino acids

Sequence
(BLAST)

001: MKNNPSFENT CSAAAGGSGS GSFNVRNLSK VILPPLGGPS GQSQSHGGSD KWVISPLDSR YRWWDTLMVV LVAYSAWVYP FEVAFMNASP KGGLEVADMV
101: VDLFFAVDIV LTFFVAYIDP RTQLLVRDRK KITLRIPPFS AIITVSGLRI KIRVERGERL GEAAAQENGG DHGKRDSAVG ETEQGLVIDA SGFAVVRSAR
201: RYLSTFFIMD VASTIPFQSL AYLITGEVRE NAAYSMLGVL RLWRLRRVKQ LFTRLEKDIR FSYFWIRSAR LIAVSWKHLS PRNSEFRRLN SEPFGAAPRV
301: HAQVTLFLVH CAGCLYYLIA DRYPDREKTW IGAVNPNFRQ ASLRIRYISS VYWSITTMTT VGYGDLHAQN TVEMIFNIFY MLFNLGLTAY LIGNMTNLVV
401: EGTRRTMEFR NSVRTASSFV GRNHLPPRLK QQILAYMCLK FRAESLNQQQ LMDQLPKSIC KSICEHLFVP VVKDVYLFKG VSREMLLSLA TKMKPEYIPP
501: KEDVIVQNEA PDDVYVVVSG EVEVVLFDGV DERVEATLGT RNIFGEVSAL SDRPQAPFTF RTRTLSQLLR LKQATLKEAM QSWPDDSVII IKNYVKHQVE
601: MHGMKADDSL GDNTSEHDDD ANVLTVAAMG NSGLLEDLLR AGKDADVGDA MGRTALHIAA SKGYEDCVLV LLKHACNANI RDAQGNTAMW NAIAAGHHKI
701: FNILYHSARA SNPHAGGDVM CLATRRGDLD ALRELLKLGL DVDSEDHDGA TALRVAMAEG HADAARFLIT NGASVDKASL DDDGSGSGAA RLTMSPTELH
801: ELLQKRELVH SITITDSPPV VPDGGSSGHS RPGRLQSTGS DNTRWPRVSI YRGHPFLRNR SSEAGKLINL PATMEEFIAV VGEKLKVDTE KALIVNDEGA
901: EVDSIDVIRD NDKLFVVTEE DLTRLAPMDS VPSS

Best Arabidopsis Sequence Match ( AT2G26650.1 )
(BLAST)

001: MRGGALLCGQ VQDEIEQLSR ESSHFSLSTG ILPSLGARSN RRVKLRRFVV SPYDHKYRIW EAFLVVLVVY TAWVSPFEFG FLRKPRPPLS ITDNIVNAFF
101: AIDIIMTFFV GYLDKSTYLI VDDRKQIAFK YLRSWFLLDL VSTIPSEAAM RISSQSYGLF NMLRLWRLRR VGALFARLEK DRNFNYFWVR CAKLVCVTLF
201: AVHCAACFYY LIAARNSNPA KTWIGANVAN FLEESLWMRY VTSMYWSITT LTTVGYGDLH PVNTKEMIFD IFYMLFNLGL TAYLIGNMTN LVVHGTSRTR
301: NFRDTIQAAS NFAHRNHLPP RLQDQMLAHL CLKYRTDSEG LQQQETLDAL PKAIRSSISH FLFYSLMDKV YLFRGVSNDL LFQLVSEMKA EYFPPKEDVI
401: LQNEAPTDFY ILVNGTADLV DVDTGTESIV REVKAGDIIG EIGVLCYRPQ LFTVRTKRLC QLLRMNRTTF LNIIQANVGD GTIIMNNLLQ HLKEMNDPVM
501: TNVLLEIENM LARGKMDLPL NLCFAAIRED DLLLHQLLKR GLDPNESDNN GRTPLHIAAS KGTLNCVLLL LEYHADPNCR DAEGSVPLWE AMVEGHEKVV
601: KVLLEHGSTI DAGDVGHFAC TAAEQGNLKL LKEIVLHGGD VTRPRATGTS ALHTAVCEEN IEMVKYLLEQ GADVNKQDMH GWTPRDLAEQ QGHEDIKALF
701: REKLHERRVH IETSSSVPIL KTGIRFLGRF TSEPNIRPAS REVSFRIRET RARRKTNNFD NSLFGILANQ SVPKNGLATV DEGRTGNPVR VTISCAEKDD
801: IAGKLVLLPG SFKELLELGS NKFGIVATKV MNKDNNAEID DVDVIRDGDH LIFATDS

Arabidopsis Description

AKT1Potassium channel AKT1 [Source:UniProtKB/Swiss-Prot;Acc:Q38998]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.