Factsheet for Zm00001d010210_P001

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol, plasma membrane

Predictor Summary:

plasma membrane 2
extracellular 1
endoplasmic reticulum 2
vacuole 1
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum, plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	endoplasmic reticulum
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d005609_P001
Zm00001d010209_P001
Zm00001d010210_P001
Zm00001d011473_P003
Zm00001d011723_P002
Zm00001d011729_P002
Zm00001d012401_P001
Zm00001d012717_P002
Zm00001d016160_P001
Zm00001d016987_P001
Zm00001d020100_P001
Zm00001d028574_P001
Zm00001d038252_P001
Zm00001d039386_P001
Zm00001d042886_P001
Zm00001d044056_P003
Zm00001d053446_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22200.1	Zm00001d011473_P003	AT2G26650.1	12678562
AT4G22200.1	Zm00001d044056_P003	AT2G26650.1	12678562
AT4G22200.1	Zm00001d011473_P003	AT2G26650.1	15299147
AT4G22200.1	Zm00001d044056_P003	AT2G26650.1	15299147
AT4G22200.1	Zm00001d005609_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d012401_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d020100_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d028574_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d042886_P001	AT3G11410.1	11181729
AT4G22200.1	Zm00001d005609_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d012401_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d020100_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d028574_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d042886_P001	AT3G11410.1	12034902
AT4G22200.1	Zm00001d010209_P001	AT4G22200.1	12678562
AT4G22200.1	Zm00001d010210_P001	AT4G22200.1	12678562
AT4G22200.1	Zm00001d038252_P001	AT4G22200.1	12678562
AT4G22200.1	Zm00001d010209_P001	AT4G22200.1	15299147
AT4G22200.1	Zm00001d010210_P001	AT4G22200.1	15299147
AT4G22200.1	Zm00001d038252_P001	AT4G22200.1	15299147
AT4G22200.1	Zm00001d010209_P001	AT4G22200.1	17085433
AT4G22200.1	Zm00001d010210_P001	AT4G22200.1	17085433
AT4G22200.1	Zm00001d038252_P001	AT4G22200.1	17085433
AT4G22200.1	Zm00001d011723_P002	AT4G32650.1	12678562
AT4G22200.1	Zm00001d011729_P002	AT4G32650.1	12678562
AT4G22200.1	Zm00001d016987_P001	AT4G32650.1	12678562
AT4G22200.1	Zm00001d012717_P002	AT5G46240.1	12034902
AT4G22200.1	Zm00001d016160_P001	AT5G46240.1	12034902
AT4G22200.1	Zm00001d039386_P001	AT5G46240.1	12034902
AT4G22200.1	Zm00001d053446_P001	AT5G46240.1	12034902
AT4G22200.1	Zm00001d012717_P002	AT5G46240.1	15299147
AT4G22200.1	Zm00001d016160_P001	AT5G46240.1	15299147
AT4G22200.1	Zm00001d039386_P001	AT5G46240.1	15299147
AT4G22200.1	Zm00001d053446_P001	AT5G46240.1	15299147
AT4G22200.1	Zm00001d012717_P002	AT5G46240.1	17085433
AT4G22200.1	Zm00001d016160_P001	AT5G46240.1	17085433
AT4G22200.1	Zm00001d039386_P001	AT5G46240.1	17085433
AT4G22200.1	Zm00001d053446_P001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0428700-01	Rice	cytosol, plastid	61.95	76.5
Zm00001d038252_P001	Maize	plastid	89.56	67.02
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	76.11	61.5
TraesCS1D01G267800.1	Wheat	plastid	75.97	61.39
TraesCS1A01G267900.1	Wheat	plastid	75.97	61.18
HORVU1Hr1G065250.2	Barley	plastid	75.39	59.35
TraesCS6B01G081300.1	Wheat	plastid	68.67	57.42
GSMUA_Achr6P24240_001	Banana	cytosol	61.52	53.75
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	59.37	50.36
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	59.23	49.34
KRH26375	Soybean	cytosol	57.94	48.74
KRH44060	Soybean	cytosol	57.37	48.08
AT4G22200.1	Thale cress	cytosol, plastid, vacuole	53.93	47.01
PGSC0003DMT400061090	Potato	cytosol	55.36	46.97
Solyc01g104030.2.1	Tomato	cytosol	56.08	46.83
CDX79135	Canola	plasma membrane	52.79	46.83
PGSC0003DMT400062100	Potato	plasma membrane	55.22	45.84
Solyc10g024360.1.1	Tomato	cytosol	54.22	45.07
Bra013599.1-P	Field mustard	cytosol	52.79	42.81
CDX82921	Canola	cytosol	52.5	42.58
Zm00001d016160_P001	Maize	plasma membrane	31.47	31.61
Zm00001d044056_P003	Maize	plasma membrane, plastid	38.48	30.33
Zm00001d053446_P001	Maize	plastid	32.62	30.08
Zm00001d016987_P001	Maize	plasma membrane	25.32	30.05
Zm00001d039386_P001	Maize	plasma membrane	27.47	29.63
Zm00001d011473_P003	Maize	plastid	38.05	29.13
Zm00001d018918_P001	Maize	plastid	36.34	27.34
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	24.61	26.88
Zm00001d011729_P002	Maize	cytosol	23.61	26.07
Zm00001d003555_P001	Maize	plasma membrane	25.89	24.3
Zm00001d037289_P002	Maize	cytosol	28.47	22.82
Zm00001d044717_P001	Maize	cytosol	28.33	22.53
Zm00001d012717_P002	Maize	plasma membrane	30.04	20.37
Zm00001d018924_P001	Maize	cytosol	11.59	18.16
KXG22062	Sorghum	plastid	1.72	7.55
Zm00001d010209_P001	Maize	plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	EntrezGene:542002	UniProt:A0A1D6FPS6
ProteinID:AQK93630.1	InterPro:Ankyrin_rpt	InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	InterPro:IPR000595
InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom
InterPro:KHA_dom	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PFscan:PS50042
PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF493	InterPro:RmlC-like_jellyroll
SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
UniParc:UPI0004DEAF37	EnsemblPlantsGene:Zm00001d010210	EnsemblPlants:Zm00001d010210_P001	EnsemblPlants:Zm00001d010210_T001	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom
SEG:seg	:	:	:	:	:

Description

potassium channel6Potassium channel2

Coordinates

chr8:+:104156555..104161455

Molecular Weight (calculated)

77784.7 Da

IEP (calculated)

7.137

GRAVY (calculated)

-0.123

Length

699 amino acids

Sequence
(BLAST)

001: MDVASTIPFQ GLAYLITGEV RENAVYSMLG VLRLWRLRRV KQFFTRLEKD IRFSYFWIRS ARLVAVTLFL VHCAGCLYYL IADRYPDRQK TWIGAVIPNF
101: RQASLRIRYI SSIYWSITTM TTVGYGDLHA QNNVEMIFNI FYMLFNLGLT AYLIGNMTNL VVEGTRRTME FRNSIRAASS FVGRNHLPPR LKQQILAYMC
201: LKFRAESLNQ QQLMDQLPKS ICKSICEHLF VPVVKDVYLF RGVSREMLLS LVTKMKPEYI PPKEDVIVQN EAPDDVYVVV SGEVEVILFD GIYEQVQATL
301: GARDIFGEVS ALSDRAQAFT FRTRTLSQLL RLKQATLKEA MQSRPEDSVV VIKNFLKHQV EMHGMKVEDL LGDNTGEHDD DANVLTVAAM GNSGLLEDLL
401: RAGKDADVGD AKGRTALHIA ASKGYEDCVL VLLKHACNVN IRDAQGNTAM WNAIAAGHHK TFNLLYQFGR ASNPRAGGDV MCLAARRGHL GALQELLKLG
501: LDVDSEDHDG ATALRVAMAE GHADAARFLI LNGASVDKAS LDDDGSGSGS GSGAARLAMS PTELRELLQK RELGHSITIH DSPAVVPNGG SSGHSRPGRL
601: QSTSSDSQRW PRVSVYKGHP FLRNRTSEAG KLINLPGTME EFRAIVGEKL KVDAEKALIV SDEGAEIDSI DVIRDNDKLF MVTEEDLRRL ASMDWLSCE

Best Arabidopsis Sequence Match ( AT4G22200.1 )
(BLAST)

001: MDLKYSASHC NLSSDMKLRR FHQHRGKGRE EEYDASSLSL NNLSKLILPP LGVASYNQNH IRSSGWIISP MDSRYRCWEF YMVLLVAYSA WVYPFEVAFL
101: NSSPKRNLCI ADNIVDLFFA VDIVLTFFVA YIDERTQLLV REPKQIAVRY LSTWFLMDVA STIPFDAIGY LITGTSTLNI TCNLLGLLRF WRLRRVKHLF
201: TRLEKDIRYS YFWIRCFRLL SVTLFLVHCA GCSYYLIADR YPHQGKTWTD AIPNFTETSL SIRYIAAIYW SITTMTTVGY GDLHASNTIE MVFITVYMLF
301: NLGLTAYLIG NMTNLVVEGT RRTMEFRNSI EAASNFVNRN RLPPRLKDQI LAYMCLRFKA ESLNQQHLID QLPKSIYKSI CQHLFLPSVE KVYLFKGVSR
401: EILLLLVSKM KAEYIPPRED VIMQNEAPDD VYIIVSGEVE IIDSEMERES VLGTLRCGDI FGEVGALCCR PQSYTFQTKS LSQLLRLKTS FLIETMQIKQ
501: QDNATMLKNF LQHHKKLSNL DIGDLKAQQN GENTDVVPPN IASNLIAVVT TGNAALLDEL LKAKLSPDIT DSKGKTPLHV AASRGYEDCV LVLLKHGCNI
601: HIRDVNGNSA LWEAIISKHY EIFRILYHFA AISDPHIAGD LLCEAAKQNN VEVMKALLKQ GLNVDTEDHH GVTALQVAMA EDQMDMVNLL ATNGADVVCV
701: NTHNEFTPLE KLRVVEEEEE EERGRVSIYR GHPLERRERS CNEAGKLILL PPSLDDLKKI AGEKFGFDGS ETMVTNEDGA EIDSIEVIRD NDKLYFVVNK
801: II

Arabidopsis Description

AKT2Potassium channel AKT2/3 [Source:UniProtKB/Swiss-Prot;Acc:Q38898]
SUBAcon: [plastid,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.