Factsheet for GSMUA_Achr6P24240_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
extracellular 1
golgi 1
plasma membrane 2
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr1P05260_001
GSMUA_Achr2P09100_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr5P09770_001
GSMUA_Achr5P09840_001
GSMUA_Achr5P29000_001
GSMUA_Achr6P05630_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P15180_001
GSMUA_Achr6P24240_001
GSMUA_Achr6P26910_001
GSMUA_Achr7P09360_001
GSMUA_Achr8P27260_001
GSMUA_Achr9P06470_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G22200.1	GSMUA_Achr3P20680_001	AT2G26650.1	12678562
AT4G22200.1	GSMUA_Achr4P08990_001	AT2G26650.1	12678562
AT4G22200.1	GSMUA_Achr4P09000_001	AT2G26650.1	12678562
AT4G22200.1	GSMUA_Achr5P09840_001	AT2G26650.1	12678562
AT4G22200.1	GSMUA_AchrUn_...	AT2G26650.1	12678562
AT4G22200.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT4G22200.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT4G22200.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT4G22200.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT4G22200.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT4G22200.1	GSMUA_Achr11P...	AT3G11410.1	11181729
AT4G22200.1	GSMUA_Achr5P29000_001	AT3G11410.1	11181729
AT4G22200.1	GSMUA_Achr6P15180_001	AT3G11410.1	11181729
AT4G22200.1	GSMUA_AchrUn_...	AT3G11410.1	11181729
AT4G22200.1	GSMUA_Achr11P...	AT3G11410.1	12034902
AT4G22200.1	GSMUA_Achr5P29000_001	AT3G11410.1	12034902
AT4G22200.1	GSMUA_Achr6P15180_001	AT3G11410.1	12034902
AT4G22200.1	GSMUA_AchrUn_...	AT3G11410.1	12034902
AT4G22200.1	GSMUA_Achr6P07280_001	AT4G22200.1	12678562
AT4G22200.1	GSMUA_Achr6P24240_001	AT4G22200.1	12678562
AT4G22200.1	GSMUA_Achr6P07280_001	AT4G22200.1	15299147
AT4G22200.1	GSMUA_Achr6P24240_001	AT4G22200.1	15299147
AT4G22200.1	GSMUA_Achr6P07280_001	AT4G22200.1	17085433
AT4G22200.1	GSMUA_Achr6P24240_001	AT4G22200.1	17085433
AT4G22200.1	GSMUA_Achr1P05260_001	AT4G32650.1	12678562
AT4G22200.1	GSMUA_Achr5P09770_001	AT4G32650.1	12678562
AT4G22200.1	GSMUA_Achr10P...	AT5G46240.1	12034902
AT4G22200.1	GSMUA_Achr2P09100_001	AT5G46240.1	12034902
AT4G22200.1	GSMUA_Achr6P05630_001	AT5G46240.1	12034902
AT4G22200.1	GSMUA_Achr6P26910_001	AT5G46240.1	12034902
AT4G22200.1	GSMUA_Achr7P09360_001	AT5G46240.1	12034902
AT4G22200.1	GSMUA_Achr8P27260_001	AT5G46240.1	12034902
AT4G22200.1	GSMUA_Achr9P06470_001	AT5G46240.1	12034902
AT4G22200.1	GSMUA_Achr10P...	AT5G46240.1	15299147
AT4G22200.1	GSMUA_Achr2P09100_001	AT5G46240.1	15299147
AT4G22200.1	GSMUA_Achr6P05630_001	AT5G46240.1	15299147
AT4G22200.1	GSMUA_Achr6P26910_001	AT5G46240.1	15299147
AT4G22200.1	GSMUA_Achr7P09360_001	AT5G46240.1	15299147
AT4G22200.1	GSMUA_Achr8P27260_001	AT5G46240.1	15299147
AT4G22200.1	GSMUA_Achr9P06470_001	AT5G46240.1	15299147
AT4G22200.1	GSMUA_Achr10P...	AT5G46240.1	17085433
AT4G22200.1	GSMUA_Achr2P09100_001	AT5G46240.1	17085433
AT4G22200.1	GSMUA_Achr6P05630_001	AT5G46240.1	17085433
AT4G22200.1	GSMUA_Achr6P26910_001	AT5G46240.1	17085433
AT4G22200.1	GSMUA_Achr7P09360_001	AT5G46240.1	17085433
AT4G22200.1	GSMUA_Achr8P27260_001	AT5G46240.1	17085433
AT4G22200.1	GSMUA_Achr9P06470_001	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	80.25	77.91
VIT_12s0034g02240.t01	Wine grape	cytosol, mitochondrion, plasma membrane	66.25	63.17
KXG22060	Sorghum	cytosol, endoplasmic reticulum, plasma membrane	54.0	62.16
Zm00001d010210_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	53.75	61.52
TraesCS1D01G267800.1	Wheat	plastid	66.38	61.39
AT4G22200.1	Thale cress	cytosol, plastid, vacuole	61.12	60.97
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	65.88	60.92
TraesCS1A01G267900.1	Wheat	plastid	66.0	60.83
CDX79135	Canola	plasma membrane	59.88	60.79
KRH26375	Soybean	cytosol	62.5	60.17
KRH44060	Soybean	cytosol	62.38	59.83
EES19575	Sorghum	plastid	62.38	59.62
KXG22062	Sorghum	plastid	11.75	59.12
KXG22064	Sorghum	plastid	62.0	58.91
PGSC0003DMT400061090	Potato	cytosol	60.5	58.74
Os05t0428700-01	Rice	cytosol, plastid	41.5	58.66
TraesCS6B01G081300.1	Wheat	plastid	61.25	58.61
HORVU1Hr1G065250.2	Barley	plastid	64.62	58.22
Solyc01g104030.2.1	Tomato	cytosol	60.88	58.18
Zm00001d010209_P001	Maize	plastid	10.12	57.86
PGSC0003DMT400062100	Potato	plasma membrane	60.0	57.01
Solyc10g024360.1.1	Tomato	cytosol	59.12	56.24
Bra013599.1-P	Field mustard	cytosol	59.88	55.57
CDX82921	Canola	cytosol	59.12	54.87
Zm00001d038252_P001	Maize	plastid	63.62	54.5
GSMUA_Achr4P09000_001	Banana	plasma membrane	32.75	46.87
GSMUA_Achr7P09360_001	Banana	plasma membrane	35.25	43.38
GSMUA_Achr10P...	Banana	plasma membrane	35.0	42.62
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	35.5	41.7
GSMUA_Achr5P09840_001	Banana	plasma membrane	42.62	41.59
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	42.38	41.54
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	41.25	41.1
GSMUA_AchrUn_...	Banana	plasma membrane	40.38	40.83
GSMUA_Achr1P05260_001	Banana	plasma membrane	32.25	40.76
GSMUA_Achr5P09770_001	Banana	plasma membrane	31.88	39.05
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	35.5	38.96
GSMUA_Achr8P27260_001	Banana	plasma membrane	35.12	38.76
GSMUA_Achr9P06470_001	Banana	plasma membrane	34.62	38.37
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	34.88	37.5
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	11.75	31.33
GSMUA_Achr3P16730_001	Banana	plasma membrane	27.38	30.33
GSMUA_Achr8P22950_001	Banana	cytosol	19.25	28.47
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	29.25	27.69

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005244
GO:GO:0005249	GO:GO:0005267	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810
GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0034765	GO:GO:0055085	GO:GO:0071805	EnsemblPlantsGene:GSMUA_Achr6G24240_001	EnsemblPlants:GSMUA_Achr6P24240_001	EnsemblPlants:GSMUA_Achr6T24240_001
InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0T9S0	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PFAM:PF12796	PFAM:PF13637	PRINTS:PR01463	PFscan:PS50042	PFscan:PS50088
PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF493	InterPro:RmlC-like_jellyroll	SMART:SM00100
SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000295BE8C
InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	:	:	:	:

Description

Potassium channel AKT2/3 [Source:GMGC_GENE;Acc:GSMUA_Achr6G24240_001]

Coordinates

chr6:-:24735864..24741883

Molecular Weight (calculated)

91003.5 Da

IEP (calculated)

7.702

GRAVY (calculated)

-0.093

Length

800 amino acids

Sequence
(BLAST)

001: MESGHERKRR HDEERSESFN LRNLSKLVLP PLGVSTYNQN QNDSRGKVIL PMDSRYRCWE TFMVVLVAYS AWVYPFEIAF MGAAPKGGLF IADNVIDAFF
101: AVDIVLTFFV AYIDSRTQVL VRDPRKIAVR YLSTWFIMDL ASTLPFEGLG YLITGRVKSG VSYSLLGMLR LWRLRKVKQF FTRLEKDIRF SYFWIRCARL
201: LCVTVFLVHC AGCLYYLLAD RYPHQGKTWI GAVMPNFREA SLWMRYIASI YWSITTMTTV GYGDLHAVNT REMIFNIFYM LCNLGLTAYL IGNMTNLVVE
301: GTRRTMEFRN SIEVASNFVC RNHLPARLRE QILAYMCLRF RAETLNQQHL MDQLPKSICK SICQHLFLPT VKEVYLFKGV SRETLLLLVT TMKAEYIPPR
401: EDVIMQNEAP EDVYIVVSGE VEIVYSDTET EQVVGALSAG DMFGEISALS DRPQSFTFRT RTLSQLLRLK QSTLKEVLQT KQEDGIAIIK NFLKVRCKNI
501: HTHKLWNDYR LDNGECDEVS IPCNLLTVAA TGNSCFLEKL LKAGMDPDIA DSRGRTPLHI AASKGYEDCV LVLLNHAGNL NIQDMDGNTP LWDAIAAKHH
601: KIFNLLHQCA CISNPNTSGD LLCLAAKRND LSTMKELLKH GLNIDSENHE GLTALQIALA ENYEDMVAFL VLNGASIEKA NLNGRGARKI RNGFTQTLVL
701: EKQENSFKLE TNGYPPRISV YKGHPLLRNN CSGSGKLMCL PSTMEELKTI IGNKFEIDAR NRILTNEDGA EVESIEVLRD NDKLFVVEDE ELVKLHSKCQ

Best Arabidopsis Sequence Match ( AT4G22200.1 )
(BLAST)

001: MDLKYSASHC NLSSDMKLRR FHQHRGKGRE EEYDASSLSL NNLSKLILPP LGVASYNQNH IRSSGWIISP MDSRYRCWEF YMVLLVAYSA WVYPFEVAFL
101: NSSPKRNLCI ADNIVDLFFA VDIVLTFFVA YIDERTQLLV REPKQIAVRY LSTWFLMDVA STIPFDAIGY LITGTSTLNI TCNLLGLLRF WRLRRVKHLF
201: TRLEKDIRYS YFWIRCFRLL SVTLFLVHCA GCSYYLIADR YPHQGKTWTD AIPNFTETSL SIRYIAAIYW SITTMTTVGY GDLHASNTIE MVFITVYMLF
301: NLGLTAYLIG NMTNLVVEGT RRTMEFRNSI EAASNFVNRN RLPPRLKDQI LAYMCLRFKA ESLNQQHLID QLPKSIYKSI CQHLFLPSVE KVYLFKGVSR
401: EILLLLVSKM KAEYIPPRED VIMQNEAPDD VYIIVSGEVE IIDSEMERES VLGTLRCGDI FGEVGALCCR PQSYTFQTKS LSQLLRLKTS FLIETMQIKQ
501: QDNATMLKNF LQHHKKLSNL DIGDLKAQQN GENTDVVPPN IASNLIAVVT TGNAALLDEL LKAKLSPDIT DSKGKTPLHV AASRGYEDCV LVLLKHGCNI
601: HIRDVNGNSA LWEAIISKHY EIFRILYHFA AISDPHIAGD LLCEAAKQNN VEVMKALLKQ GLNVDTEDHH GVTALQVAMA EDQMDMVNLL ATNGADVVCV
701: NTHNEFTPLE KLRVVEEEEE EERGRVSIYR GHPLERRERS CNEAGKLILL PPSLDDLKKI AGEKFGFDGS ETMVTNEDGA EIDSIEVIRD NDKLYFVVNK
801: II

Arabidopsis Description

AKT2Potassium channel AKT2/3 [Source:UniProtKB/Swiss-Prot;Acc:Q38898]
SUBAcon: [cytosol,vacuole,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.