Factsheet for GSMUA_Achr1P05260_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P25450_001
GSMUA_Achr3P20680_001
GSMUA_Achr4P08990_001
GSMUA_Achr4P09000_001
GSMUA_Achr5P09840_001
GSMUA_Achr6P07280_001
GSMUA_Achr6P24240_001
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	GSMUA_Achr3P20680_001	AT2G26650.1	12678562
AT4G32650.1	GSMUA_Achr4P08990_001	AT2G26650.1	12678562
AT4G32650.1	GSMUA_Achr4P09000_001	AT2G26650.1	12678562
AT4G32650.1	GSMUA_Achr5P09840_001	AT2G26650.1	12678562
AT4G32650.1	GSMUA_AchrUn_...	AT2G26650.1	12678562
AT4G32650.1	GSMUA_Achr3P20680_001	AT2G26650.1	15299147
AT4G32650.1	GSMUA_Achr4P08990_001	AT2G26650.1	15299147
AT4G32650.1	GSMUA_Achr4P09000_001	AT2G26650.1	15299147
AT4G32650.1	GSMUA_Achr5P09840_001	AT2G26650.1	15299147
AT4G32650.1	GSMUA_AchrUn_...	AT2G26650.1	15299147
AT4G32650.1	GSMUA_Achr6P07280_001	AT4G22200.1	12678562
AT4G32650.1	GSMUA_Achr6P24240_001	AT4G22200.1	12678562
AT4G32650.1	GSMUA_Achr1P25450_001	AT5G14570.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P09770_001	Banana	plasma membrane	85.94	83.31
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	62.09	62.28
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	36.49	61.93
HORVU3Hr1G068040.1	Barley	plasma membrane	41.39	61.22
Solyc01g010080.2.1	Tomato	plastid	59.72	60.19
PGSC0003DMT400065964	Potato	cytosol, plastid	59.72	59.9
PGSC0003DMT400037608	Potato	plastid	58.61	59.55
Os04t0117500-00	Rice	plasma membrane	25.59	56.64
Solyc08g068000.1.1	Tomato	plasma membrane	57.5	56.61
TraesCS3D01G246300.1	Wheat	plastid	51.66	54.96
KRH61886	Soybean	plasma membrane	53.08	53.76
TraesCS3A01G245200.1	Wheat	mitochondrion	51.03	53.74
Os06t0254200-00	Rice	plasma membrane, plastid	50.87	52.79
Bra037049.1-P	Field mustard	plastid	52.13	51.16
CDY13496	Canola	plastid	52.92	51.07
OQU87429	Sorghum	mitochondrion	50.08	50.72
CDX68872	Canola	plastid	52.13	50.69
CDX75267	Canola	plastid	51.97	50.54
Bra011367.1-P	Field mustard	plastid	51.97	50.54
KRH52547	Soybean	cytosol	47.08	50.17
AT4G32650.1	Thale cress	plastid	51.82	49.55
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	50.08	49.53
CDX72366	Canola	plastid	49.76	48.84
Zm00001d011729_P002	Maize	cytosol	47.71	47.71
Zm00001d016987_P001	Maize	plasma membrane	42.34	45.5
TraesCS3B01G274500.1	Wheat	plastid	46.45	45.44
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	42.18	44.43
GSMUA_Achr4P09000_001	Banana	plasma membrane	38.7	43.83
GSMUA_Achr10P...	Banana	plasma membrane	43.76	42.16
GSMUA_Achr7P09360_001	Banana	plasma membrane	42.97	41.85
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	43.6	40.53
GSMUA_Achr6P26910_001	Banana	endoplasmic reticulum, peroxisome, plasma membrane	43.13	37.45
GSMUA_Achr9P06470_001	Banana	plasma membrane	42.34	37.12
GSMUA_Achr8P27260_001	Banana	plasma membrane	42.5	37.1
GSMUA_Achr2P09100_001	Banana	plasma membrane, vacuole	42.65	36.29
GSMUA_AchrUn_...	Banana	plasma membrane	42.97	34.39
GSMUA_Achr5P09840_001	Banana	plasma membrane	44.23	34.15
GSMUA_Achr3P20680_001	Banana	cytosol, nucleus, plasma membrane	43.13	34.0
GSMUA_Achr4P08990_001	Banana	cytosol, mitochondrion, plasma membrane	42.81	33.21
GSMUA_Achr6P24240_001	Banana	cytosol	40.76	32.25
GSMUA_Achr6P07280_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	39.02	29.98
GSMUA_Achr8P22960_001	Banana	nucleus, peroxisome, plasma membrane	13.27	28.0
GSMUA_Achr3P16730_001	Banana	plasma membrane	27.01	23.68
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	30.49	22.84
GSMUA_Achr8P22950_001	Banana	cytosol	17.54	20.52
CDY61287	Canola	plasma membrane	16.11	19.25
Bra021279.1-P	Field mustard	nucleus	15.01	16.61
CDY10020	Canola	cytosol	7.27	13.49

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085	GO:GO:0071805
EnsemblPlantsGene:GSMUA_Achr1G05260_001	EnsemblPlants:GSMUA_Achr1P05260_001	EnsemblPlants:GSMUA_Achr1T05260_001	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	UniProt:M0RX84	PFAM:PF00027	PFAM:PF00520
PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF537
InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000295B9CA
InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg	:	:	:

Description

Potassium channel KAT3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G05260_001]

Coordinates

chr1:+:4358834..4362828

Molecular Weight (calculated)

72450.9 Da

IEP (calculated)

8.197

GRAVY (calculated)

0.036

Length

633 amino acids

Sequence
(BLAST)

001: MVDDERRKQK PWLIRRGWSS GQIKSFAALS SSLLPAFGAG VDGNYPDIKK YIIAPYDPRY RWWQMFLIVL VFYSAWASPL ELAFPQVSSG SLLVVDLVVD
101: VFFGVDIVVS FSVAYFNSST YLLVDDRRKI AKRYLTRPWF VMDVASTIPF HIIYRIITGR GNGGSVFGVV NLLRLWRLRR ASKLFARLEK DIRFSYFWTR
201: YVKLICVTLF AVHSSACVYY WMAIHYRVKE KTWIGSLIPD FQERSIWLGY TYAIYWSITT LTTVGYGDLH AWNTGEKVFT IFLMLFNIGL TAYLIGNMTN
301: LIVHAATRTF LMRDTIHRVS RFASKHRLPD GLREQTMAHL QLRFKTMELQ QEEVIADLPK AIRSTIAQHL FRRTVEATYL FKGVSPEFIV QLVSEMKAEY
401: FPPKVDIIIE NEIPTDLYII VSGAVDVLTS KNGAEKFLST VGPADLVGEI GVIFNIPQPF TVRSKRLSQV VRISHRHFMQ IVQPYNADGK RVLSNFMQFL
501: KELSTDLIEE VAFVPELLKQ MNEEGISEEL QDLEASMSND QETAAQEPLT AAYSSSSCDL DKRVTIHGHH PEETSKIGRH AAGKLIFLPD SMEELLKLAE
601: KTFGMEARRV LAPDGAEIEE ICTIRDNDHL FIC

Best Arabidopsis Sequence Match ( AT4G32650.1 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQI EERRREGVPK RVIIHGQAPP
601: NQDNKNNGDS NGRLIILPDS IQLLFDLAEK KLGKRGSTIA MADGAHVEQI DALRENDHLY IF

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.