Factsheet for TraesCS3A01G245200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 4
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, secretory
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
Predotar:	mitochondrion
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G267900.1
TraesCS1B01G278600.1
TraesCS1D01G267800.1
TraesCS3A01G233800.1
TraesCS3B01G265500.1
TraesCS3D01G219600.1
TraesCS6B01G081300.1
TraesCS7A01G428500.1
TraesCS7B01G328700.1
TraesCS7D01G420900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G32650.1	TraesCS3A01G233800.1	AT2G26650.1	12678562
AT4G32650.1	TraesCS3B01G265500.1	AT2G26650.1	12678562
AT4G32650.1	TraesCS3D01G219600.1	AT2G26650.1	12678562
AT4G32650.1	TraesCS3A01G233800.1	AT2G26650.1	15299147
AT4G32650.1	TraesCS3B01G265500.1	AT2G26650.1	15299147
AT4G32650.1	TraesCS3D01G219600.1	AT2G26650.1	15299147
AT4G32650.1	TraesCS1A01G267900.1	AT4G22200.1	12678562
AT4G32650.1	TraesCS1B01G278600.1	AT4G22200.1	12678562
AT4G32650.1	TraesCS1D01G267800.1	AT4G22200.1	12678562
AT4G32650.1	TraesCS6B01G081300.1	AT4G22200.1	12678562
AT4G32650.1	TraesCS7A01G428500.1	AT5G14570.1	15299147
AT4G32650.1	TraesCS7B01G328700.1	AT5G14570.1	15299147
AT4G32650.1	TraesCS7D01G420900.1	AT5G14570.1	15299147

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G246300.1	Wheat	plastid	94.18	95.13
HORVU3Hr1G068040.1	Barley	plasma membrane	65.56	92.06
TraesCS3B01G274500.1	Wheat	plastid	85.36	79.29
Os01t0718700-00	Rice	endoplasmic reticulum, plasma membrane	41.26	66.49
Os04t0117500-00	Rice	plasma membrane	29.28	61.54
Os06t0254200-00	Rice	plasma membrane, plastid	58.24	57.38
OQU87429	Sorghum	mitochondrion	53.08	51.04
GSMUA_Achr1P05260_001	Banana	plasma membrane	53.74	51.03
Zm00001d011723_P002	Maize	cytosol, plasma membrane, plastid	53.08	49.84
Zm00001d011729_P002	Maize	cytosol	51.75	49.13
GSMUA_Achr5P09770_001	Banana	plasma membrane	52.91	48.7
VIT_04s0008g04510.t01	Wine grape	cytosol, mitochondrion, peroxisome, plasma membrane	50.75	48.34
PGSC0003DMT400037608	Potato	plastid	48.75	47.03
Solyc01g010080.2.1	Tomato	plastid	48.92	46.82
PGSC0003DMT400065964	Potato	cytosol, plastid	48.75	46.43
Zm00001d016987_P001	Maize	plasma membrane	45.26	46.18
Solyc08g068000.1.1	Tomato	plasma membrane	48.42	45.26
EES07044	Sorghum	cytosol, mitochondrion, peroxisome, plasma membrane	44.59	44.59
KRH61886	Soybean	plasma membrane	45.59	43.84
Bra037049.1-P	Field mustard	plastid	46.59	43.41
Bra011367.1-P	Field mustard	plastid	46.76	43.16
CDX75267	Canola	plastid	46.76	43.16
CDX68872	Canola	plastid	46.76	43.16
CDY13496	Canola	plastid	46.42	42.53
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	34.94	42.0
AT4G32650.1	Thale cress	plastid	46.26	41.99
CDX72366	Canola	plastid	43.93	40.93
KRH52547	Soybean	cytosol	40.1	40.57
TraesCS6A01G160500.1	Wheat	plasma membrane	40.6	33.61
TraesCS3A01G132400.1	Wheat	plasma membrane	37.94	31.71
TraesCS3A01G233800.1	Wheat	plasma membrane	42.76	28.65
TraesCS1A01G267900.1	Wheat	plastid	36.61	25.35
TraesCS2A01G321100.1	Wheat	plastid	38.27	25.22
TraesCS2A01G312800.1	Wheat	plasma membrane	26.12	21.72
TraesCS7A01G200200.1	Wheat	cytosol, plasma membrane, vacuole	29.28	21.0
TraesCS7A01G200100.1	Wheat	cytosol	28.95	20.91
TraesCS7A01G199900.1	Wheat	cytosol	26.62	18.85
CDY61287	Canola	plasma membrane	15.64	17.74
Bra021279.1-P	Field mustard	nucleus	14.14	14.86
CDY10020	Canola	cytosol	4.99	8.8

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005886	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813	GO:GO:0008150	GO:GO:0009605
GO:GO:0009607	GO:GO:0009624	GO:GO:0009987	GO:GO:0016020	GO:GO:0055085	GO:GO:0071805
InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG
PFAM:PF00520	PFAM:PF11834	PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217
PANTHER:PTHR10217:SF537	InterPro:RmlC-like_jellyroll	SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix
EnsemblPlantsGene:TraesCS3A01G245200	EnsemblPlants:TraesCS3A01G245200.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038	SEG:seg

Description

No Description!

Coordinates

chr3A:+:458935715..458941114

Molecular Weight (calculated)

67879.8 Da

IEP (calculated)

8.912

GRAVY (calculated)

0.082

Length

601 amino acids

Sequence
(BLAST)

001: MAMAGVRSQR GSSSSRMLLP RNISLSTGHL PEALGGAPPP LRPNVINPYG RPYRCARLDR LRHACTALDL DRRYWQMFLI VLVAYSAWAS PFELALEKAA
101: SRAHLVVDLV VDVFFCADIV VSFFVAYRDR STDLLVDDRS KIAVRYLTRP WFVLDVASTI PLQIVYQLVR GKRNGPCGFL ILLRLWRLRR ASKLFTRLEK
201: DTRLSYFWTR FIKLVCVALF ALHCASCVYL WLAFHYRDKE QTWIGSLRGD FKERSVWFAY TYAVYWSMTT MATVGYGDLH AANTGEKLFS ILFMLCNMGV
301: ACYVIGNMTN LVVHGATTTF RMRDMVDQVA RYGKANRLPV WMREQMVESV QLRFQMAELL LPDEVLSELP KAARSAVAQH LYKATVEDSY LFRGASDNLV
401: VQLVSEMKAE FFPPKMDIVL ENEIPTDCYI IASGQVFIMR IGPHGMAGEI GVMLNIPQPF TIRSRTLTQV IRISRSHLQS TIWPATADGD TIFSNFVQYL
501: ESLKVRHGEE LTFARELGHD TLPFQNGDPI RVVIHGQIPH GSGMAGNRAA GKLVCLPGSL EELLKLGEDK FGMAARHVLT ADGAEVDDVR ALRDGDHLFL
601: S

Best Arabidopsis Sequence Match ( AT4G32650.3 )
(BLAST)

001: MSTTTTEARS PLPLLLRRGR SSTALSASTA EARSPLSILQ FRRRSSKDVR NITSVSSSLL PAFGTFIEDD NPSSKPFIVL HFDRRYRLWE LFLVILVGYS
101: AWASLFELAF EKAAEGALLT IDLVVDFFFA VDIILTFFVS YLDNTTYLNV TDHKLIAKRY LKSVAFVMDV ASTLPIQFIY KTITGDVGRG QAFGFLNLLR
201: LWRLRRVAEL FKRLEKDAHF NYFVIRVIKL LCVTIFWIHL AGCILYWIAY HYPRPTDTWI GSQVEDFKER SVWLGYTYSM YWSIVTLTTV GYGDLHAVNS
301: REKTFNMFYM LFNIGLTSYI IGIMTNLVVH GALRTFAMRS AINDILRYTS KNRLPDTMRE QMLAHMQLKF KTAELRQEEV LQDLPKAIRS SINQHLFRSI
401: IEEAYLFKGF PEGLLVQLVS QIQAEYFPPK MEIILQNEIP TDFYVIVSGG VDIIASKGVS EQVLAKLGPG SMAGEIGVVF NIPQPFTVRT RRLSQVIRIG
501: HHKFKEMVQS DNDVDAKMII ANFMTYLKGL NDELKKEIPF LRDLLDDADA QVQETVQSEE TPQSNDEEIV TVSRHENGQK ERRREGVPKR VIIHGQAPPN
601: QDNKNNGDSN GRLIILPDSI QLLFDLAEKK LGKRGSTIAM ADGAHVEQID ALRENDHLYI F

Arabidopsis Description

KAT3KC1 [Source:UniProtKB/TrEMBL;Acc:A0A178UVX9]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.