Factsheet for TraesCS7A01G200200.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 2
golgi 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, plasma membrane, vacuole
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	96.9	98.78
TraesCS7B01G106900.1	Wheat	cytosol, plasma membrane, vacuole	98.09	98.44
HORVU7Hr1G040990.20	Barley	endoplasmic reticulum, plasma membrane	88.54	93.22
KXG19708	Sorghum	cytosol	84.25	82.67
Os06t0250600-01	Rice	cytosol	84.13	82.17
TraesCS7A01G200100.1	Wheat	cytosol	79.36	79.93
Zm00001d037289_P002	Maize	cytosol	82.58	79.36
Zm00001d044717_P001	Maize	cytosol	82.58	78.73
TraesCS7A01G199900.1	Wheat	cytosol	76.37	75.38
GSMUA_Achr8P22950_001	Banana	cytosol	48.57	75.23
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	66.47	65.92
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	55.01	63.06
Solyc03g097940.2.1	Tomato	plasma membrane	55.97	60.36
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	58.0	58.13
TraesCS2A01G312800.1	Wheat	plasma membrane	48.21	55.88
KRH60563	Soybean	mitochondrion, plasma membrane	49.4	53.15
TraesCS3A01G294200.1	Wheat	mitochondrion, plasma membrane	20.53	34.4
TraesCS3A01G245200.1	Wheat	mitochondrion	21.0	29.28
TraesCS3A01G233800.1	Wheat	plasma membrane	30.91	28.87
TraesCS3A01G132400.1	Wheat	plasma membrane	24.22	28.23
TraesCS6A01G160500.1	Wheat	plasma membrane	24.34	28.1
TraesCS1A01G267900.1	Wheat	plastid	28.76	27.77
TraesCS2A01G321100.1	Wheat	plastid	27.68	25.44

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	ncoils:Coil	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216
GO:GO:0005249	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811
GO:GO:0006813	GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110
InterPro:IPR014710	InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom
InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01463
PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478
InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7A01G200200	EnsemblPlants:TraesCS7A01G200200.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7A:-:162591225..162598121

Molecular Weight (calculated)

95236.6 Da

IEP (calculated)

5.987

GRAVY (calculated)

-0.192

Length

838 amino acids

Sequence
(BLAST)

001: MGRLGSKRRV GEETEMEVVE EEEKEYEVEE VRDRLQSSRN SRLALFGSDL RLGPRRRRPP RRPAVDGEDG FFHDHIILPD NKWYLLWTKF ILVWAVYSSF
101: FTPFEFGFFR GLPDKLFVLD IVGQIAFLID IVLKFFVAYR DPDTYRIVRN PTSIALRYCK SSFIFDLLGC FPWDIIYKAC GSKEEVRYLL WIRLTRALKV
201: TEFFRDLEKD IRVNYLFTRI VKLIVVEIYC THTAACIFYY LATTLPESME GNTWIGSLKL GEYSYDHFRE LDLIKLYTTS LYFAIVTMAT VGYGDIHAVN
301: VREMIFVMIY VSFDMILGAY LIGNMTALIV KGSRTERFRD KMKEVIRYMN RNKLGKEIRE QIKGHLRLQY ESSYTEASVL QDIPISIRAK ISQTLYKPYV
401: ESTPLFKGCS AEFIQQIVIR LQEEFFLPGE VILEQGSAVD QIYFVCHGAL EGVGIGEDGQ EETILMLEPE SSFGEIAILC NIPQPYSVRV CELCRLLRLD
501: KQSFTNILEI YFVDGRKILS NLTDNNEYGG RVKQIESDIT FHIGKQEAEL TLRVNSAAFY GDLNQLKGLI RAGADPKNTD YDGRSPLHLA ASKGYEDVAQ
601: FLIHEGADID LADKFGNTPL LEAVKQGHDR VAALLFGRGA KLNLENAGSH LCMAVSKGDS DFVRRALAYG ADPDSKDYDH RSPLHIAAAD GLYMMAKMLV
701: DAGASVFATD RWGTTPLDEG RKSGSKPLMM LLEQAKADEL SKFPARGEEV RDRMHPRRCS VFPNHPWDDG AGRREGVTLW IPHTIDGLIR SAQEKLGLSG
801: SGLRLLGEDG ARVQEVDMVH DGQKLYLVGG DDRTGQSE

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.