Factsheet for TraesCS7B01G106900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:

vacuole 1
mitochondrion 1
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane, vacuole
Any Predictor:	cytosol, plasma membrane, vacuole
MultiLoc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G203200.1	Wheat	cytosol, plasma membrane, vacuole	97.13	98.66
TraesCS7A01G200200.1	Wheat	cytosol, plasma membrane, vacuole	98.44	98.09
HORVU7Hr1G040990.20	Barley	endoplasmic reticulum, plasma membrane	89.46	93.84
KXG19708	Sorghum	cytosol	84.43	82.55
Os06t0250600-01	Rice	cytosol	84.79	82.52
TraesCS7B01G106800.1	Wheat	cytosol	58.08	82.48
Zm00001d037289_P002	Maize	cytosol	82.75	79.24
Zm00001d044717_P001	Maize	cytosol	82.87	78.73
TraesCS7B01G106600.1	Wheat	cytosol	66.23	75.34
GSMUA_Achr8P22950_001	Banana	cytosol	48.5	74.86
GSMUA_Achr9P15840_001	Banana	cytosol, mitochondrion, plasma membrane, vacuole	66.59	65.8
VIT_17s0000g01980.t01	Wine grape	golgi, plasma membrane	55.33	63.2
Solyc03g097940.2.1	Tomato	plasma membrane	56.29	60.49
VIT_11s0016g05810.t01	Wine grape	cytosol, endoplasmic reticulum, plasma membrane	58.2	58.13
TraesCS2B01G329800.1	Wheat	plasma membrane	49.1	56.71
KRH60563	Soybean	mitochondrion, plasma membrane	49.46	53.02
TraesCS3B01G328800.1	Wheat	plasma membrane	20.72	34.26
TraesCS3B01G265500.1	Wheat	plasma membrane	30.78	28.65
TraesCS6B01G081300.1	Wheat	plastid	28.5	28.47
TraesCS1B01G278600.1	Wheat	plasma membrane, plastid	29.34	28.32
TraesCS6B01G190900.1	Wheat	plasma membrane	24.31	28.0
TraesCS3B01G167100.1	Wheat	plasma membrane	23.59	27.4
TraesCS3B01G274500.1	Wheat	plastid	19.52	25.19

Protein Annotations

Gene3D:1.10.287.630	Gene3D:1.10.287.70	Gene3D:1.25.40.20	Gene3D:2.60.120.10	MapMan:24.3.2.2	InterPro:Ankyrin_rpt
InterPro:Ankyrin_rpt-contain_dom	InterPro:Ankyrin_rpt-contain_sf	GO:GO:0003674	GO:GO:0005215	GO:GO:0005216	GO:GO:0005249
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0016020	GO:GO:0055085	InterPro:IPR000595	InterPro:IPR002110	InterPro:IPR014710
InterPro:IPR020683	InterPro:IPR021789	InterPro:IPR036770	InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG
PFAM:PF00027	PFAM:PF00520	PFAM:PF11834	PFAM:PF12796	PRINTS:PR01415	PRINTS:PR01463
PFscan:PS50042	PFscan:PS50088	PFscan:PS50297	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF478
InterPro:RmlC-like_jellyroll	SMART:SM00100	SMART:SM00248	SUPFAM:SSF48403	SUPFAM:SSF51206	SUPFAM:SSF81324
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS7B01G106900	EnsemblPlants:TraesCS7B01G106900.1	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	TIGR:cd00038
TIGR:cd00204	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr7B:-:123667132..123673633

Molecular Weight (calculated)

94707.9 Da

IEP (calculated)

5.964

GRAVY (calculated)

-0.171

Length

835 amino acids

Sequence
(BLAST)

001: MGRLGSKRRV GEEAELEAVE EEKEYEVEEV HDRLQSSRNS RLALFGSDLR LGPRRRRPPR RPAVDGEDGF FHDHIILPDN KLYLLWTKFI LVWAVYSSFF
101: TPFEFGFFRG LPDKLFVLDI VGQIAFLIDI VLKFFVAYRD PDTYRIVRNP TSIALRYCKS SFIFDLLGCF PWDIIYKACG SKEEVRYLLW IRLTRALKVT
201: EFFRDLEKDI RVNYLFTRIV KLIVVEIYCT HTAACIFYYL ATTLPESMEG NTWIGSLKLG EYSYDHFREL DLIKLYTTSL YFAIVTMATV GYGDIHAVNV
301: REMIFVMIYV SFDMILGAYL IGNMTALIVK GSRTERFRDK MKEVIRYMNR NKLGKEIREQ IKGHLRLQYE SSYTEASVLQ DIPISIRAKI SQTLYKPYVE
401: STPLFKGCSA EFIQQIVIRL QEEFFLPGEV ILEQGSAVDQ IYFVCHGALE GVGIGEDGQE ETILMLEPES SFGEIAILCN IPQPYSVRVC ELCRLLRLDK
501: QSFTNILEIY FVDGRKILSN LTDNNEYGGR VKQIESDITF HIGKQEAELT LRVNSAAFYG DLNQLKGLIR AGADPKNTDY DGRSPLHLAA SKGYEDVAQF
601: LIHEGADIDL ADKFGNTPLL EAVKQGHDRV ATLLFSRGAK LNLENAGSHL CMAVSKGDSD FVRRALAYGA DPDSKDYDHR SPLHIAAAEG LYMMAKMLVD
701: AGASVFATDR WGTTPLDEGR KSGSKPLMLL LEQAKADELS KFPARGEEVR DRMHPRRCSV FPNHPWDDGA ERREGVTLWI PHTIDGLVRS AQEKLGLSGS
801: GLRLLGEDGA RVQEVDMVHD GQKLYLVGGD DGAGQ

Best Arabidopsis Sequence Match ( AT3G02850.1 )
(BLAST)

001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET

Arabidopsis Description

SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.