Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G312800.1 | Wheat | plasma membrane | 97.79 | 97.79 |
| TraesCS2D01G311300.1 | Wheat | plasma membrane | 97.79 | 93.03 |
| HORVU2Hr1G077680.12 | Barley | cytosol | 95.99 | 90.48 |
| EES10868 | Sorghum | cytosol | 82.85 | 82.62 |
| Os04t0445000-01 | Rice | cytosol | 50.21 | 79.96 |
| Zm00001d003555_P001 | Maize | plasma membrane | 77.18 | 74.9 |
| GSMUA_Achr3P16730_001 | Banana | plasma membrane | 62.66 | 62.74 |
| VIT_18s0089g01300.t01 | Wine grape | plasma membrane | 62.1 | 61.51 |
| TraesCS7B01G106600.1 | Wheat | cytosol | 50.07 | 49.32 |
| TraesCS7B01G106900.1 | Wheat | cytosol, plasma membrane, vacuole | 56.71 | 49.1 |
| TraesCS7B01G106800.1 | Wheat | cytosol | 39.7 | 48.81 |
| TraesCS3B01G328800.1 | Wheat | plasma membrane | 22.13 | 31.68 |
| TraesCS6B01G081300.1 | Wheat | plastid | 30.71 | 26.55 |
| TraesCS3B01G265500.1 | Wheat | plasma membrane | 32.37 | 26.09 |
| TraesCS1B01G278600.1 | Wheat | plasma membrane, plastid | 30.84 | 25.78 |
| TraesCS6B01G190900.1 | Wheat | plasma membrane | 25.03 | 24.97 |
| TraesCS3B01G167100.1 | Wheat | plasma membrane | 23.65 | 23.78 |
| TraesCS3B01G274500.1 | Wheat | plastid | 19.5 | 21.79 |
Protein Annotations
| Gene3D:1.10.287.70 | Gene3D:1.25.40.20 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom |
| InterPro:Ankyrin_rpt-contain_sf | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 | GO:GO:0005249 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 | GO:GO:0006813 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR002110 | InterPro:IPR014710 | InterPro:IPR020683 |
| InterPro:IPR036770 | InterPro:Ion_trans_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG | PFAM:PF00027 | PFAM:PF00520 | PFAM:PF12796 |
| PRINTS:PR01415 | PRINTS:PR01463 | PFscan:PS50042 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR10217 |
| PANTHER:PTHR10217:SF478 | InterPro:RmlC-like_jellyroll | SMART:SM00100 | SMART:SM00248 | SUPFAM:SSF48403 | SUPFAM:SSF51206 |
| SUPFAM:SSF81324 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G329800 | EnsemblPlants:TraesCS2B01G329800.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom |
| TIGR:cd00038 | TIGR:cd00204 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:-:474443551..474446858
Molecular Weight (calculated)
81757.2 Da
IEP (calculated)
8.647
GRAVY (calculated)
-0.013
Length
723 amino acids
Sequence
(BLAST)
(BLAST)
001: MEREIGAEYE LNEIDGGTLH GSVGSRLSLF AREFKWRSSS WHSSSALRLP NNCYGSSFVI DPNGRWYRMW SNMMFLWSIY SVFYTPFAFC FFRGIPEHLL
101: DLECVQLIFL ADVAVHFFLA YRDPHTHRVV YDQQRIALRY IKGSFALDML GCFPWDAVYK FTGRMEVVRY LVWLRLYRAR KIQGFFKKME KDIRISYLFT
201: RIAKLATVEL YCTHTAACVF YYLATTLPPA REGGTWIGSL TMGDQSYINF RKVDLLTRYI TSLYLAIVTM ATVGYGDVHA VNPREMVFIV VYVSFSMLLG
301: AYLIGNMTAL IVKGSRTERF RDKMTELIRY MNRNRLGSDI RSQVKAHLLL QYESSYKRDR IVDDIPAAVR SKTLYLDTVS KVHLFRGCSE DFLSQIVVKI
401: QEEFFLPGEV ILEQGTVVDQ IYIVAHGCLE EIGTGEGGSE EIVSELLPYD IVGDVAVICN TRQPYTVRVS ELCSLLRIDK QSLTSILQMY LKDSRQILSN
501: LLKGKRTESK GKQLESDITY LIAKQEADLV LGVNNAAYHG DLFRLKGLIG AGADPSKPDY DGRTSLHVAA SRGYEDIVRF LIKRGAKVNS IDKSGKSPLL
601: EAVKSGHERI ISLLVAHGAA LNLEDAGGYL CRVVAQGKID LLRRLLRFGI DPNCRNYDRR TPLHVAASEG LHLVAGMLVE FGADLVAADR WGNTPLDEAR
701: RCGCKPLVRI LEQARAAAAP ADQ
101: DLECVQLIFL ADVAVHFFLA YRDPHTHRVV YDQQRIALRY IKGSFALDML GCFPWDAVYK FTGRMEVVRY LVWLRLYRAR KIQGFFKKME KDIRISYLFT
201: RIAKLATVEL YCTHTAACVF YYLATTLPPA REGGTWIGSL TMGDQSYINF RKVDLLTRYI TSLYLAIVTM ATVGYGDVHA VNPREMVFIV VYVSFSMLLG
301: AYLIGNMTAL IVKGSRTERF RDKMTELIRY MNRNRLGSDI RSQVKAHLLL QYESSYKRDR IVDDIPAAVR SKTLYLDTVS KVHLFRGCSE DFLSQIVVKI
401: QEEFFLPGEV ILEQGTVVDQ IYIVAHGCLE EIGTGEGGSE EIVSELLPYD IVGDVAVICN TRQPYTVRVS ELCSLLRIDK QSLTSILQMY LKDSRQILSN
501: LLKGKRTESK GKQLESDITY LIAKQEADLV LGVNNAAYHG DLFRLKGLIG AGADPSKPDY DGRTSLHVAA SRGYEDIVRF LIKRGAKVNS IDKSGKSPLL
601: EAVKSGHERI ISLLVAHGAA LNLEDAGGYL CRVVAQGKID LLRRLLRFGI DPNCRNYDRR TPLHVAASEG LHLVAGMLVE FGADLVAADR WGNTPLDEAR
701: RCGCKPLVRI LEQARAAAAP ADQ
001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
Arabidopsis Description
SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.