Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G329800.1 | Wheat | plasma membrane | 90.48 | 95.99 |
| TraesCS2A01G312800.1 | Wheat | plasma membrane | 89.96 | 95.44 |
| TraesCS2D01G311300.1 | Wheat | plasma membrane | 91.0 | 91.84 |
| EES10868 | Sorghum | cytosol | 76.4 | 80.83 |
| Os04t0445000-01 | Rice | cytosol | 46.68 | 78.85 |
| Zm00001d003555_P001 | Maize | plasma membrane | 71.32 | 73.42 |
| GSMUA_Achr3P16730_001 | Banana | plasma membrane | 58.54 | 62.19 |
| VIT_18s0089g01300.t01 | Wine grape | plasma membrane | 57.89 | 60.82 |
| HORVU7Hr1G040990.20 | Barley | endoplasmic reticulum, plasma membrane | 50.72 | 48.87 |
| HORVU7Hr1G040880.7 | Barley | cytosol, plasma membrane | 47.2 | 46.77 |
| HORVU7Hr1G040970.5 | Barley | cytosol | 52.28 | 42.03 |
| HORVU3Hr1G068040.1 | Barley | plasma membrane | 18.51 | 33.18 |
| HORVU3Hr1G072850.15 | Barley | plastid | 19.56 | 29.3 |
| HORVU2Hr1G083820.1 | Barley | cytosol | 25.55 | 27.11 |
| HORVU3Hr1G058300.1 | Barley | plasma membrane | 29.99 | 25.61 |
| HORVU1Hr1G065250.2 | Barley | plastid | 29.34 | 25.34 |
| HORVU3Hr1G028670.16 | Barley | plasma membrane | 21.64 | 23.41 |
Protein Annotations
| Gene3D:1.10.287.70 | Gene3D:1.25.40.20 | Gene3D:2.60.120.10 | MapMan:24.3.2.2 | UniProt:A0A287IJJ6 | InterPro:Ankyrin_rpt |
| InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005216 |
| GO:GO:0005249 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006811 |
| GO:GO:0006813 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0034220 |
| GO:GO:0055085 | GO:GO:0071805 | EnsemblPlantsGene:HORVU2Hr1G077680 | EnsemblPlants:HORVU2Hr1G077680.12 | InterPro:IPR000595 | InterPro:IPR002110 |
| InterPro:IPR014710 | InterPro:IPR020683 | InterPro:IPR036770 | InterPro:Ion_trans_dom | InterPro:K_chnl_volt-dep_EAG/ELK/ERG | PFAM:PF00027 |
| PFAM:PF00520 | PFAM:PF12796 | PRINTS:PR01415 | PRINTS:PR01463 | PFscan:PS50042 | PFscan:PS50088 |
| PFscan:PS50297 | PANTHER:PTHR10217 | PANTHER:PTHR10217:SF478 | InterPro:RmlC-like_jellyroll | SMART:SM00100 | SMART:SM00248 |
| SUPFAM:SSF48403 | SUPFAM:SSF51206 | SUPFAM:SSF81324 | TMHMM:TMhelix | UniParc:UPI000B4687D4 | InterPro:cNMP-bd-like |
| InterPro:cNMP-bd_dom | SEG:seg | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:-:562105959..562110203
Molecular Weight (calculated)
85983.2 Da
IEP (calculated)
8.857
GRAVY (calculated)
-0.050
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: RSEPDRPQLG KAPNNHLHRP NAGAVRARCG AQSPLMCNQK GRRGMEREIG GAEYELNEID GALHGSVGSR LSLFAREFKW PSSSSALRLP SNCYGSSFVI
101: DPNGRWYRMW SNMMFLWSIY SVFYTPFAFC FFRGIPEHLL DLECVQLIFL ADVAVHFYLA YRDPHTHRVV YDQQRIALRY IKGSFALDML GCFPWDAVYK
201: FTGRMEVVRY LVWLRLYRAR KIQGFFKKME KDIRISYLFT RIVKLATVEL YCTHTAACVF YYLATTLPPA REGGTWIGSL TMGDQSYINF RKVDVLTRYI
301: TSLYLAIVTM ATVGYGDVHA VNPREMVFIV VYVSFSMLLG AYLIGNMTAL IVKGSRTERF RDKMTELIRY MNRNRLGSDI SSQVKAHLLL QYESSYKRDR
401: IVDDIPAAVR SKTLYLETVS NVHLFRGCSE DFLSQIVVKI QEEFFLPGEV ILEQGTVVDQ IYIVAHGCLQ EIGAVGEGGS EEIVSELLPY DIVGDVAVIC
501: NTRQPYTVRV SELCSLLRID KQSLTSTLQM YLKDSRQILS NLLKGKQTES KGKQLESDIT YLIAKQEADL VLGVNNAAYH GDLLRLKGLI GAGADPSKPD
601: YDGRTSLHVA ASRGYEDIVR FLIKRGANVN SIDKSGKSPL LQAVKSGHER IISVLVAHGA ALNLEDAGGY LCRVVAQGKI DLLRRLLSFG IDPNCRNYDR
701: RTPLHVAASE GLHLVAGMLV EFGADLAATD RWGNTPLDEA RRCGCKPLVR ILEHARAAAA AAAAANQ
101: DPNGRWYRMW SNMMFLWSIY SVFYTPFAFC FFRGIPEHLL DLECVQLIFL ADVAVHFYLA YRDPHTHRVV YDQQRIALRY IKGSFALDML GCFPWDAVYK
201: FTGRMEVVRY LVWLRLYRAR KIQGFFKKME KDIRISYLFT RIVKLATVEL YCTHTAACVF YYLATTLPPA REGGTWIGSL TMGDQSYINF RKVDVLTRYI
301: TSLYLAIVTM ATVGYGDVHA VNPREMVFIV VYVSFSMLLG AYLIGNMTAL IVKGSRTERF RDKMTELIRY MNRNRLGSDI SSQVKAHLLL QYESSYKRDR
401: IVDDIPAAVR SKTLYLETVS NVHLFRGCSE DFLSQIVVKI QEEFFLPGEV ILEQGTVVDQ IYIVAHGCLQ EIGAVGEGGS EEIVSELLPY DIVGDVAVIC
501: NTRQPYTVRV SELCSLLRID KQSLTSTLQM YLKDSRQILS NLLKGKQTES KGKQLESDIT YLIAKQEADL VLGVNNAAYH GDLLRLKGLI GAGADPSKPD
601: YDGRTSLHVA ASRGYEDIVR FLIKRGANVN SIDKSGKSPL LQAVKSGHER IISVLVAHGA ALNLEDAGGY LCRVVAQGKI DLLRRLLSFG IDPNCRNYDR
701: RTPLHVAASE GLHLVAGMLV EFGADLAATD RWGNTPLDEA RRCGCKPLVR ILEHARAAAA AAAAANQ
001: MGGSSGGGVS YRSGGESDVE LEDYEVDDFR DGIVESRGNR FNPLTNFLGL DFAGGSGGKF TVINGIRDIS RGSIVHPDNR WYKAWTMFIL IWALYSSFFT
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
101: PLEFGFFRGL PENLFILDIA GQIAFLVDIV LTFFVAYRDS RTYRMIYKRS SIALRYLKST FIIDLLACMP WDIIYKAAGE KEEVRYLLLI RLYRVHRVIL
201: FFHKMEKDIR INYLFTRIVK LIFVELYCTH TAACIFYYLA TTLPASQEGY TWIGSLKLGD YSYSKFREID LWTRYTTSMY FAVVTMATVG YGDIHAVNMR
301: EMIFAMVYIS FDMILGAYLI GNMTALIVKG SKTERFRDKM ADIMRYMNRN KLGRNIRGQI TGHLRLQYES SYTEAAVLQD IPVSIRAKIA QTLYLPYIEK
401: VPLFRGCSSE FINQIVIRLH EEFFLPGEVI MEQGSVVDQL YFVCHGVLEE IGITKDGSEE IVAVLQPDHS FGEISILCNI PQPYTVRVAE LCRILRLDKQ
501: SFMNILEIFF HDGRRILNNL LEGKESNVRI KQLESDITFH ISKQEAELAL KLNSAAFYGD LYQLKSLIRA GGDPNKTDYD GRSPLHLAAS RGYEDITLYL
601: IQESVDVNIK DKLGSTPLLE AIKNGNDRVA ALLVKEGATL NIENAGTFLC TVVAKGDSDF LKRLLSNGID PNSKDYDHRT PLHVAASEGF YVLAIQLVEA
701: SANVLAKDRW GNTPLDEALG CGNKMLIKLL EDAKNSQISS FPSGSKEPKD KVYKKKCTVY FSHPGDSKEK RRRGIVLWVP RSIEELIRTA KEQLNVPEAS
801: CVLSEDEAKI IDVDLISDGQ KLYLAVET
Arabidopsis Description
SKORSKOR [Source:UniProtKB/TrEMBL;Acc:A0A178VHK5]
SUBAcon: [plasma membrane,vacuole,cytosol]
SUBAcon: [plasma membrane,vacuole,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.