Factsheet for HORVU3Hr1G028670.16

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plasma membrane 2
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	golgi, plasma membrane
MultiLoc:	plasma membrane
WoLF PSORT:	plasma membrane
YLoc:	golgi

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU1Hr1G065250.2
HORVU2Hr1G105240.3
HORVU2Hr1G105300.1
HORVU2Hr1G105340.1
HORVU2Hr1G105360.5
HORVU3Hr1G028670.16
HORVU3Hr1G058300.1
HORVU3Hr1G072850.15
HORVU5Hr1G019740.1
HORVU6Hr1G066740.2

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G46240.1	HORVU3Hr1G058300.1	AT2G26650.1	15299147
AT5G46240.1	HORVU1Hr1G065250.2	AT4G22200.1	12034902
AT5G46240.1	HORVU1Hr1G065250.2	AT4G22200.1	15299147
AT5G46240.1	HORVU1Hr1G065250.2	AT4G22200.1	17085433
AT5G46240.1	HORVU2Hr1G105240.3	AT5G41160.1	15299147
AT5G46240.1	HORVU2Hr1G105300.1	AT5G41160.1	15299147
AT5G46240.1	HORVU2Hr1G105340.1	AT5G41160.1	15299147
AT5G46240.1	HORVU2Hr1G105360.5	AT5G41160.1	15299147
AT5G46240.1	HORVU5Hr1G019740.1	AT5G41160.1	15299147
AT5G46240.1	HORVU6Hr1G066740.2	AT5G41160.1	15299147
AT5G46240.1	HORVU3Hr1G028670.16	AT5G46240.1	11042178
AT5G46240.1	HORVU3Hr1G072850.15	AT5G46240.1	11042178
AT5G46240.1	HORVU3Hr1G028670.16	AT5G46240.1	15299147
AT5G46240.1	HORVU3Hr1G072850.15	AT5G46240.1	15299147
AT5G46240.1	HORVU3Hr1G028670.16	AT5G46240.1	17085433
AT5G46240.1	HORVU3Hr1G072850.15	AT5G46240.1	17085433

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G148600.1	Wheat	plasma membrane	92.38	91.1
TraesCS3A01G132400.1	Wheat	plasma membrane	92.38	91.1
TraesCS3B01G167100.1	Wheat	plasma membrane	91.54	90.26
Os01t0210700-02	Rice	extracellular	64.46	76.04
Zm00001d039386_P001	Maize	plasma membrane	58.96	64.51
GSMUA_Achr10P...	Banana	plasma membrane	52.19	56.32
GSMUA_Achr7P09360_001	Banana	plasma membrane	51.34	56.0
HORVU3Hr1G072850.15	Barley	plastid	40.2	55.66
GSMUA_Achr6P05630_001	Banana	cytosol, nucleus, plasma membrane	50.92	53.01
CDY03233	Canola	plasma membrane	48.66	52.59
Bra017567.1-P	Field mustard	plasma membrane	48.52	52.36
CDY35154	Canola	plasma membrane	48.52	52.36
AT5G46240.1	Thale cress	plasma membrane	48.8	51.11
CDX78839	Canola	plasma membrane	48.66	50.44
CDY33464	Canola	cytosol, plasma membrane, plastid	47.25	50.3
CDY62359	Canola	cytosol, plasma membrane, plastid	47.25	50.3
CDX99479	Canola	plasma membrane	48.52	50.22
Bra013296.1-P	Field mustard	plasma membrane	48.66	50.22
Bra025028.1-P	Field mustard	cytosol, endoplasmic reticulum, plasma membrane	47.11	50.15
Solyc02g070530.2.1	Tomato	nucleus	48.52	50.0
Solyc08g016500.2.1	Tomato	cytosol, endoplasmic reticulum, mitochondrion, plasma membrane	47.95	49.78
PGSC0003DMT400054339	Potato	plasma membrane	47.95	49.42
PGSC0003DMT400024968	Potato	cytosol, plasma membrane, vacuole	47.67	49.06
AT4G18290.2	Thale cress	mitochondrion, plasma membrane	47.81	47.88
KRH44805	Soybean	plasma membrane	47.67	46.43
KRH21063	Soybean	plasma membrane	50.78	46.33
KRH11194	Soybean	plasma membrane	50.35	45.95
VIT_10s0003g03270.t01	Wine grape	plasma membrane	50.35	45.13
Bra021012.1-P	Field mustard	plasma membrane	45.27	45.08
CDX76529	Canola	plasma membrane	45.27	45.08
HORVU3Hr1G068040.1	Barley	plasma membrane	26.52	43.93
Solyc03g058900.1.1	Tomato	cytosol	11.14	40.51
CDY34066	Canola	endoplasmic reticulum, plasma membrane	33.99	39.83
KRH58233	Soybean	cytosol, extracellular, plasma membrane	12.13	38.74
HORVU3Hr1G058300.1	Barley	plasma membrane	44.15	34.86
PGSC0003DMT400024866	Potato	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	13.54	33.22
PGSC0003DMT400054318	Potato	nucleus	14.67	33.02
HORVU2Hr1G083820.1	Barley	cytosol	33.0	32.37
HORVU1Hr1G065250.2	Barley	plastid	38.79	30.97
HORVU7Hr1G040990.20	Barley	endoplasmic reticulum, plasma membrane	27.08	24.12
HORVU7Hr1G040880.7	Barley	cytosol, plasma membrane	25.39	23.26
HORVU2Hr1G077680.12	Barley	cytosol	23.41	21.64
HORVU7Hr1G040970.5	Barley	cytosol	27.5	20.44

Protein Annotations

Gene3D:1.10.287.70	Gene3D:2.60.120.10	MapMan:24.3.2.2	UniProt:A0A287KJV2	GO:GO:0003674	GO:GO:0005215
GO:GO:0005216	GO:GO:0005249	GO:GO:0005575	GO:GO:0006810	GO:GO:0006811	GO:GO:0006813
GO:GO:0008150	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0034220	GO:GO:0055085
GO:GO:0071805	EnsemblPlantsGene:HORVU3Hr1G028670	EnsemblPlants:HORVU3Hr1G028670.16	InterPro:IPR000595	InterPro:IPR014710	InterPro:IPR021789
InterPro:Ion_trans_dom	InterPro:KHA_dom	InterPro:K_chnl_volt-dep_EAG/ELK/ERG	PFAM:PF00027	PFAM:PF00520	PFAM:PF11834
PRINTS:PR01463	PFscan:PS50042	PFscan:PS51490	PANTHER:PTHR10217	PANTHER:PTHR10217:SF495	InterPro:RmlC-like_jellyroll
SMART:SM00100	SUPFAM:SSF51206	SUPFAM:SSF81324	TMHMM:TMhelix	UniParc:UPI000B4862CD	InterPro:cNMP-bd-like
InterPro:cNMP-bd_dom	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:129451226..129455895

Molecular Weight (calculated)

81699.3 Da

IEP (calculated)

6.810

GRAVY (calculated)

-0.141

Length

709 amino acids

Sequence
(BLAST)

001: MDNINNIFHN DLLPSLGARA NQSIKLRKFI ISPYDSRYRI WETFLLVLVV YSAWIYPFEL AFLRHLSWKL FIVENIVNSF FAIDIVLTFF LAYLDHKSYL
101: LVDNPQRIAA RYLSSWFIFD VCSTIPYQPF GLLFNKHGNG LAYRILNMLR LWRLRRLSAL FARLEKDIRL NYYWIRCTKL ISVTLFAIHC SGCFIYLIAD
201: TYPDPSRTWI GAAIPNYRSE SLWVRYVTSI YWSITTLTTT GYGDLHAENP REMSFCICFM LFNLGLTAYL IGNMTNLVVQ GSCRTRNFRD TVHAASRFAA
301: RNQLPEQISD EMLAHICLRY KTEGLKQKET LDSLPKAIRS SIACHLFLPV LEKIYLFDGV SFTCRLQLVT TMEAEYYPPR ETVILQNETP TDVYILVSGA
401: VEERIMIDGR EKIEKLLSGG DIFGEIGVLC NIPQPFTFRT SRISQLLRLN TTVLKNIIQE NKRDKEIIMN NLYQKMNSDQ RFSTDTVEVC QGTLDQHFGE
501: YNRCFAANQV NINNEAKAEE TLTLACSEER CKELNESDRH GAIHSTIEQG ISNINIDFPD KSEDMENRVA TSQITDKWEA DEHEHTSTDN CMTGYRGARD
601: RFKNIGKDRI SGQPIITDKM LTCSVAGELQ EITDACIEAD SVISEIKRVT IHMHPQQNRS SVMPYAKVIN LPGSLDRLFG IAREKFPGYY PVKLFNQDFA
701: EIDDIAVIR

Best Arabidopsis Sequence Match ( AT5G46240.1 )
(BLAST)

001: MSISWTRNFF ERFCVEEYNI DTIKQSSFLS ADLLPSLGAR INQSTKLRKH IISPFNPRYR AWEMWLVLLV IYSAWICPFQ FAFITYKKDA IFIIDNIVNG
101: FFAIDIILTF FVAYLDSHSY LLVDSPKKIA IRYLSTWFAF DVCSTAPFQP LSLLFNYNGS ELGFRILSML RLWRLRRVSS LFARLEKDIR FNYFWIRCTK
201: LISVTLFAIH CAGCFNYLIA DRYPNPRKTW IGAVYPNFKE ASLWNRYVTA LYWSITTLTT TGYGDFHAEN PREMLFDIFF MMFNLGLTAY LIGNMTNLVV
301: HWTSRTRTFR DSVRAASEFA SRNQLPHDIQ DQMLSHICLK FKTEGLKQQE TLNNLPKAIR SSIANYLFFP IVHNIYLFQG VSRNFLFQLV SDIDAEYFPP
401: KEDIILQNEA PTDLYILVSG AVDFTVYVDG HDQFQGKAVI GETFGEVGVL YYRPQPFTVR TTELSQILRI SRTSLMSAMH AHADDGRVIM NNLFMKLRGQ
501: QSIAIDDSNT SGHENRDFKS MGWEEWRDSR KDGYGLDVTN PTSDTALMDA IHKEDTEMVK KILKEQKIER AKVERSSSET AGRSYANDSS KKDPYCSSSN
601: QIIKPCKREE KRVTIHMMSE SKNGKLILLP SSIEELLRLA SEKFGGCNFT KITNADNAEI DDLDVIWDGD HLYFSSN

Arabidopsis Description

KAT1At5g46240 [Source:UniProtKB/TrEMBL;Acc:Q67YG3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.