Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, golgi, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 3
- plasma membrane 3
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G028670.16 | |
| HORVU3Hr1G072850.15 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | HORVU3Hr1G028670.16 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | HORVU3Hr1G072850.15 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G452300.1 | Wheat | peroxisome | 91.82 | 93.73 |
| HORVU2Hr1G105240.3 | Barley | peroxisome | 98.72 | 93.69 |
| TraesCS2A01G452500.1 | Wheat | peroxisome | 92.58 | 93.54 |
| HORVU2Hr1G105360.5 | Barley | peroxisome | 93.09 | 88.35 |
| TraesCS2B01G474000.1 | Wheat | cytosol, peroxisome, plasma membrane | 93.86 | 82.1 |
| KXG27004 | Sorghum | golgi, peroxisome, vacuole | 72.89 | 72.33 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 47.57 | 51.38 |
| CDY12545 | Canola | plasma membrane | 39.13 | 51.34 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.11 | 49.83 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 46.04 | 49.32 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 45.52 | 48.9 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 45.27 | 47.97 |
| HORVU2Hr1G105300.1 | Barley | peroxisome | 45.52 | 47.59 |
| AT1G44750.1 | Thale cress | plasma membrane | 45.01 | 46.44 |
| VIT_19s0014g00150.t01 | Wine grape | plasma membrane | 43.73 | 45.12 |
| HORVU6Hr1G066740.2 | Barley | golgi, mitochondrion | 47.06 | 44.02 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 41.94 | 43.16 |
| KRH13483 | Soybean | plasma membrane | 33.25 | 42.35 |
| CDY14989 | Canola | plasma membrane | 44.76 | 42.17 |
| Bra036955.1-P | Field mustard | plasma membrane | 44.76 | 42.17 |
| Zm00001d026042_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 72.38 | 42.05 |
| CDX71327 | Canola | plasma membrane | 44.5 | 41.83 |
| Bra037874.1-P | Field mustard | plasma membrane | 35.04 | 41.02 |
| AT4G08700.1 | Thale cress | plasma membrane | 36.83 | 39.89 |
| KRH21843 | Soybean | mitochondrion | 41.94 | 39.05 |
| AT5G41160.1 | Thale cress | plasma membrane | 35.81 | 38.46 |
| CDY54350 | Canola | plasma membrane | 29.92 | 35.24 |
| CDX75141 | Canola | plasma membrane | 29.16 | 34.34 |
| HORVU4Hr1G078220.1 | Barley | endoplasmic reticulum, plasma membrane | 21.74 | 31.25 |
| HORVU5Hr1G019740.1 | Barley | cytosol, plastid | 25.58 | 30.03 |
| HORVU5Hr1G069880.1 | Barley | plasma membrane | 20.46 | 29.63 |
| HORVU4Hr1G078210.1 | Barley | plastid | 28.9 | 28.97 |
| HORVU2Hr1G127610.1 | Barley | cytosol, plasma membrane | 7.93 | 26.05 |
| HORVU5Hr1G088530.5 | Barley | cytosol, endoplasmic reticulum, peroxisome | 26.6 | 25.18 |
| HORVU5Hr1G069920.5 | Barley | cytosol | 17.65 | 24.82 |
| HORVU3Hr1G062690.1 | Barley | plastid | 25.32 | 24.75 |
| HORVU5Hr1G104050.3 | Barley | cytosol, peroxisome, plasma membrane | 25.83 | 24.22 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 22.76 | 23.55 |
| HORVU5Hr1G069960.1 | Barley | cytosol, plasma membrane | 25.83 | 23.43 |
| HORVU5Hr1G069910.2 | Barley | cytosol, peroxisome, plasma membrane | 21.48 | 22.89 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 23.79 | 22.85 |
| HORVU1Hr1G085120.1 | Barley | plastid | 23.27 | 22.75 |
| HORVU2Hr1G127530.7 | Barley | endoplasmic reticulum, plasma membrane | 19.69 | 22.13 |
| HORVU1Hr1G085150.1 | Barley | plastid | 22.76 | 20.99 |
| HORVU7Hr1G086680.1 | Barley | mitochondrion | 8.7 | 17.71 |
Protein Annotations
| EnsemblPlants:HORVU2Hr1G105340.1 | EnsemblPlantsGene:HORVU2Hr1G105340 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF33 |
| PFAM:PF16913 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002969C2C | UniProt:M0VBL1 | MapMan:24.2.1.6 |
Description
No Description!
Coordinates
chrchr2H:+:706241730..706243220
Molecular Weight (calculated)
41780.9 Da
IEP (calculated)
7.054
GRAVY (calculated)
0.488
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MGAAGEIHLQ IAGTRGEQGA EGVADNGTSP ATAAPAPPSM SERVQWWAVV LVNIVLVLAG QSVANLLGRI YYDQGGGSLW IATVVQSCGT PLAIPLLLYF
101: RRRPKAATTA VTRPPLIKIS AIYAGLGVLL AGDNLMYSYA LLYLPLSTYS LICATQLSFN AVFSYFLNKQ KFTALILNSV VLLTFSAALV GVSHGSDGTN
201: SSVPAGKFPL GFALTLSASA LFSLILSLNQ LTFDKVLRSD TLYDVMEMQF WSNTAAAVVS VAGLFISGEW SALHGEMDGY RKGRLAYGMT LAWTAISWQL
301: TTMGLMGLVA AVSSLFTNVI STVGLPLSPI IAVIFLGDRM DGVKVLAMLV AVWGFLSYIY QHYLDDAKVK KNLAERSADD DEHQTVKLAT E
101: RRRPKAATTA VTRPPLIKIS AIYAGLGVLL AGDNLMYSYA LLYLPLSTYS LICATQLSFN AVFSYFLNKQ KFTALILNSV VLLTFSAALV GVSHGSDGTN
201: SSVPAGKFPL GFALTLSASA LFSLILSLNQ LTFDKVLRSD TLYDVMEMQF WSNTAAAVVS VAGLFISGEW SALHGEMDGY RKGRLAYGMT LAWTAISWQL
301: TTMGLMGLVA AVSSLFTNVI STVGLPLSPI IAVIFLGDRM DGVKVLAMLV AVWGFLSYIY QHYLDDAKVK KNLAERSADD DEHQTVKLAT E
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.