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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 2
  • golgi 2
  • plasma membrane 4
  • endoplasmic reticulum 3
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
ChloroP:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5B01G244800.1 Wheat plasma membrane 94.07 67.37
TraesCS5D01G254100.1 Wheat plasma membrane 93.7 67.11
TraesCS5A01G247600.1 Wheat plasma membrane 92.96 66.58
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 29.26 66.39
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 82.22 65.88
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 87.04 60.26
KXG35809 Sorghum plasma membrane 84.44 58.61
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 74.44 48.2
PGSC0003DMT400054207 Potato plasma membrane 31.11 47.46
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 72.96 45.71
PGSC0003DMT400072048 Potato extracellular, plasma membrane 45.93 45.59
CDY46618 Canola plasma membrane 37.78 44.93
HORVU7Hr1G086680.1 Barley mitochondrion 31.85 44.79
HORVU4Hr1G078220.1 Barley endoplasmic reticulum, plasma membrane 43.33 43.01
CDY15687 Canola plasma membrane 47.78 42.57
KRH72416 Soybean endoplasmic reticulum, plasma membrane 51.85 40.7
VIT_18s0001g06950.t01 Wine grape plasma membrane 52.59 40.69
VIT_18s0001g06910.t01 Wine grape plasma membrane 52.59 40.46
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 52.22 40.17
PGSC0003DMT400039797 Potato mitochondrion 25.93 40.0
CDY17197 Canola extracellular, plasma membrane 51.48 39.6
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 52.22 39.5
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 24.81 39.41
Bra005474.1-P Field mustard extracellular, plasma membrane 50.74 39.03
CDY27947 Canola plasma membrane 50.37 38.97
HORVU5Hr1G069920.5 Barley cytosol 40.0 38.85
KRH52994 Soybean cytosol, nucleus, plasma membrane 49.63 38.84
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 49.63 38.51
Bra010890.1-P Field mustard plasma membrane 49.26 37.78
CDX90136 Canola plasma membrane 49.26 37.78
Bra010891.1-P Field mustard plasma membrane 49.63 37.64
CDY35722 Canola plasma membrane 48.89 37.29
AT1G28230.1 Thale cress plasma membrane 48.89 37.08
PGSC0003DMT400036604 Potato extracellular, plasma membrane 47.04 37.03
Bra030078.1-P Field mustard extracellular, plasma membrane 47.78 36.96
CDX94594 Canola extracellular, plasma membrane 47.78 36.96
CDX94595 Canola plasma membrane 47.41 36.68
AT2G33750.1 Thale cress plasma membrane 48.15 36.31
AT1G28220.1 Thale cress plasma membrane 46.67 35.9
PGSC0003DMT400071864 Potato plasma membrane 45.19 35.78
Solyc12g087870.1.1 Tomato plasma membrane 46.67 35.39
PGSC0003DMT400005470 Potato extracellular, plasma membrane 46.3 35.31
Bra036866.1-P Field mustard plasma membrane 48.89 35.11
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 45.93 35.03
CDY29741 Canola plasma membrane 48.89 35.01
Solyc07g008440.2.1 Tomato plasma membrane 47.41 34.88
CDY35721 Canola plasma membrane 41.11 34.8
CDX90135 Canola plasma membrane 41.48 34.67
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 42.22 34.65
CDY12422 Canola plasma membrane 48.15 34.57
PGSC0003DMT400005467 Potato plasma membrane 44.81 34.38
CDY16284 Canola plasma membrane 47.78 34.22
Solyc04g074880.2.1 Tomato plasma membrane 44.07 33.52
HORVU5Hr1G069910.2 Barley cytosol, peroxisome, plasma membrane 43.7 32.15
CDY72169 Canola plasma membrane 28.15 30.04
HORVU4Hr1G078210.1 Barley plastid 43.33 30.0
PGSC0003DMT400085139 Potato mitochondrion 41.11 28.68
HORVU2Hr1G105300.1 Barley peroxisome 33.33 24.06
HORVU3Hr1G062690.1 Barley plastid 35.56 24.0
HORVU1Hr1G085140.1 Barley endoplasmic reticulum 32.96 23.55
HORVU1Hr1G085230.1 Barley mitochondrion 33.7 22.36
HORVU1Hr1G085120.1 Barley plastid 32.96 22.25
HORVU5Hr1G088530.5 Barley cytosol, endoplasmic reticulum, peroxisome 33.33 21.79
HORVU6Hr1G066740.2 Barley golgi, mitochondrion 32.96 21.29
HORVU1Hr1G085150.1 Barley plastid 33.33 21.23
HORVU2Hr1G105340.1 Barley golgi, peroxisome, plasma membrane 29.63 20.46
HORVU2Hr1G105360.5 Barley peroxisome 30.0 19.66
HORVU2Hr1G105240.3 Barley peroxisome 29.63 19.42
HORVU5Hr1G019740.1 Barley cytosol, plastid 15.56 12.61
Protein Annotations
EnsemblPlants:HORVU5Hr1G069880.1EnsemblPlantsGene:HORVU5Hr1G069880GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF12
PFAM:PF16913SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000B46DFEDUniProt:A0A287RP72
MapMan:24.2.1.6:::::
Description
No Description!
Coordinates
chrchr5H:-:526114584..526117899
Molecular Weight (calculated)
28692.4 Da
IEP (calculated)
6.968
GRAVY (calculated)
0.728
Length
270 amino acids
Sequence
(BLAST)
001: MSPRLLAATV AVGLMTGLDD LLYAYGLAYL PVSTSSILIS TQLAFTAAFA LLLVRQRFTA FSVNAVVLLS VGAAMLGMNA GGDRPAGVTR PQYYAGFGMT
101: LGAALIYGIV LPVMELSQAR HAARTGAAVT YTLVMEMQIV IGFTATAFSA VGMLVNNDFH AIRGEAREFG LGQIGYYLLL AGSATVYQFF FLDTIGAIFY
201: GSALLAGVIM TVLIPVTEVL AVMFFHEPFN GTKGVALALS LWGFVSYLYG EVRAKAKQSD KPLNAEHLDP
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.