Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G028670.16 | |
| HORVU3Hr1G072850.15 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | HORVU3Hr1G028670.16 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | HORVU3Hr1G072850.15 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G105300.1 | Barley | peroxisome | 64.26 | 57.22 |
| TraesCS5A01G413800.1 | Wheat | peroxisome | 61.86 | 55.08 |
| TraesCS2B01G474100.1 | Wheat | peroxisome | 61.86 | 55.08 |
| TraesCS2D01G452400.1 | Wheat | peroxisome | 61.56 | 54.81 |
| TraesCS2A01G452600.1 | Wheat | peroxisome | 59.76 | 53.21 |
| Zm00001d002515_P001 | Maize | peroxisome | 42.04 | 37.63 |
| EES11332 | Sorghum | peroxisome | 40.84 | 36.36 |
| GSMUA_Achr5P12690_001 | Banana | plasma membrane | 31.23 | 29.8 |
| HORVU6Hr1G066740.2 | Barley | golgi, mitochondrion | 36.04 | 28.71 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 30.03 | 27.62 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 30.03 | 27.4 |
| AT1G44750.1 | Thale cress | plasma membrane | 30.63 | 26.91 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 30.63 | 26.84 |
| HORVU2Hr1G105340.1 | Barley | golgi, peroxisome, plasma membrane | 30.03 | 25.58 |
| AT4G08700.1 | Thale cress | plasma membrane | 26.73 | 24.65 |
| CDY14989 | Canola | plasma membrane | 30.63 | 24.58 |
| Bra036955.1-P | Field mustard | plasma membrane | 30.63 | 24.58 |
| CDY12545 | Canola | plasma membrane | 21.92 | 24.5 |
| AT5G41160.1 | Thale cress | plasma membrane | 26.73 | 24.45 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 27.03 | 24.39 |
| CDX71327 | Canola | plasma membrane | 30.33 | 24.28 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 26.43 | 24.18 |
| HORVU2Hr1G105240.3 | Barley | peroxisome | 29.43 | 23.79 |
| VIT_19s0014g00150.t01 | Wine grape | plasma membrane | 26.73 | 23.48 |
| Bra037874.1-P | Field mustard | plasma membrane | 23.42 | 23.35 |
| HORVU2Hr1G105360.5 | Barley | peroxisome | 28.53 | 23.06 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 20.12 | 22.41 |
| KRH13483 | Soybean | plasma membrane | 19.82 | 21.5 |
| KRH21843 | Soybean | mitochondrion | 27.03 | 21.43 |
| CDY54350 | Canola | plasma membrane | 19.22 | 19.28 |
| HORVU7Hr1G086680.1 | Barley | mitochondrion | 11.11 | 19.27 |
| CDX75141 | Canola | plasma membrane | 18.92 | 18.98 |
| HORVU5Hr1G069920.5 | Barley | cytosol | 14.71 | 17.63 |
| HORVU5Hr1G069910.2 | Barley | cytosol, peroxisome, plasma membrane | 18.92 | 17.17 |
| HORVU2Hr1G127530.7 | Barley | endoplasmic reticulum, plasma membrane | 17.72 | 16.95 |
| HORVU4Hr1G078210.1 | Barley | plastid | 18.92 | 16.15 |
| HORVU5Hr1G069880.1 | Barley | plasma membrane | 12.61 | 15.56 |
| HORVU5Hr1G104050.3 | Barley | cytosol, peroxisome, plasma membrane | 18.62 | 14.87 |
| HORVU5Hr1G069960.1 | Barley | cytosol, plasma membrane | 18.32 | 14.15 |
| HORVU5Hr1G088530.5 | Barley | cytosol, endoplasmic reticulum, peroxisome | 17.42 | 14.04 |
| HORVU3Hr1G062690.1 | Barley | plastid | 15.32 | 12.75 |
| HORVU4Hr1G078220.1 | Barley | endoplasmic reticulum, plasma membrane | 10.21 | 12.5 |
| HORVU1Hr1G085120.1 | Barley | plastid | 15.02 | 12.5 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 14.11 | 12.43 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 14.41 | 11.79 |
| HORVU1Hr1G085150.1 | Barley | plastid | 14.11 | 11.08 |
| HORVU2Hr1G127610.1 | Barley | cytosol, plasma membrane | 1.2 | 3.36 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G019740.1 | EnsemblPlantsGene:HORVU5Hr1G019740 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF2 |
| PFAM:PF16913 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B48527B | UniProt:A0A287QJQ9 | MapMan:24.2.1.6 |
Description
No Description!
Coordinates
chrchr5H:-:87129924..87131393
Molecular Weight (calculated)
29703.6 Da
IEP (calculated)
9.054
GRAVY (calculated)
-0.033
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MADASAGNNA GSTSNAEVQI QIPAGPPKAE PGPPSKSSGA KNWRWWLMVS VDVFFVVAGQ TSATLLARFY YHQGGSSKWI STFVQTAGFP ILFLPLLCFP
101: KSXXXXXXXX XPKSSDGGGA SGDAPVAKVA VIYVVLGLII AADDMMYASG LKYLPVSTYS LICASQLAFN VVFSYVLNSQ KLTGLIFNAV ILLTLSDALL
201: GVNHDETEDM SGMPRXXXXX XXXXXXXXXH LLAHPLPHAA HLRERHQEAH LHGGPQHADL HGARRHRRLH GRPLRQRRVE DDDGXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXAA VTLLAGASRH NHH
101: KSXXXXXXXX XPKSSDGGGA SGDAPVAKVA VIYVVLGLII AADDMMYASG LKYLPVSTYS LICASQLAFN VVFSYVLNSQ KLTGLIFNAV ILLTLSDALL
201: GVNHDETEDM SGMPRXXXXX XXXXXXXXXH LLAHPLPHAA HLRERHQEAH LHGGPQHADL HGARRHRRLH GRPLRQRRVE DDDGXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXAA VTLLAGASRH NHH
001: MSGNQEPILV KEESVVGIPT PLLKLKSWQW WVLVSVNIFF LIGGQAASVL LGRFYYDEGG NSKWMATLVQ TAAFPILYIP LLLLPSSASV ESSESSCSLK
101: YIVLIYVLLG VIIAGDNMLY SVGLLYLSAS TYSLICATQL AFNAVFSYFI NAQKFTALIL NSVVLLSFSA ALIALNDDAD TPSGVSRSKY IVGFVCTLAA
201: SALYSLLLSL MQFSFEKILK RETFSVVLEM QIYTSLVATC VSVIGLFASG EWRTLHGEME GYHKGQASYV LTLVWTAVTW QVCSVGVVGL IFLVTSLFSN
301: VISTLSLAVT PLAALVVFRD KMSGVKIMAM LIAIWGFASY VYQNHIDDLK VRQARQQAQA GRVEPPC
101: YIVLIYVLLG VIIAGDNMLY SVGLLYLSAS TYSLICATQL AFNAVFSYFI NAQKFTALIL NSVVLLSFSA ALIALNDDAD TPSGVSRSKY IVGFVCTLAA
201: SALYSLLLSL MQFSFEKILK RETFSVVLEM QIYTSLVATC VSVIGLFASG EWRTLHGEME GYHKGQASYV LTLVWTAVTW QVCSVGVVGL IFLVTSLFSN
301: VISTLSLAVT PLAALVVFRD KMSGVKIMAM LIAIWGFASY VYQNHIDDLK VRQARQQAQA GRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.