Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| HORVU3Hr1G028670.16 | |
| HORVU3Hr1G072850.15 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | HORVU3Hr1G028670.16 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | HORVU3Hr1G072850.15 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G289900.1 | Wheat | peroxisome | 83.01 | 89.2 |
| TraesCS6A01G262900.1 | Wheat | plasma membrane | 83.01 | 88.97 |
| TraesCS6D01G243400.1 | Wheat | golgi, peroxisome, plasma membrane | 82.78 | 88.72 |
| Os02t0689200-03 | Rice | plasma membrane | 73.44 | 79.74 |
| Zm00001d051504_P001 | Maize | golgi, peroxisome, plasma membrane | 73.21 | 79.69 |
| GSMUA_Achr5P12690_001 | Banana | plasma membrane | 55.02 | 65.9 |
| EES05697 | Sorghum | plastid | 72.97 | 60.88 |
| HORVU2Hr1G105300.1 | Barley | peroxisome | 54.07 | 60.43 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 50.96 | 58.84 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 51.2 | 58.63 |
| CDY12545 | Canola | plasma membrane | 40.91 | 57.38 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 40.19 | 56.19 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 48.33 | 55.49 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 48.8 | 55.28 |
| AT1G44750.1 | Thale cress | plasma membrane | 49.04 | 54.09 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 48.09 | 52.89 |
| VIT_19s0014g00150.t01 | Wine grape | plasma membrane | 47.13 | 51.98 |
| Bra037874.1-P | Field mustard | plasma membrane | 41.39 | 51.8 |
| KRH13483 | Soybean | plasma membrane | 37.08 | 50.49 |
| AT4G08700.1 | Thale cress | plasma membrane | 42.58 | 49.31 |
| CDY14989 | Canola | plasma membrane | 48.33 | 48.67 |
| Bra036955.1-P | Field mustard | plasma membrane | 48.09 | 48.43 |
| CDX71327 | Canola | plasma membrane | 48.09 | 48.32 |
| AT5G41160.1 | Thale cress | plasma membrane | 41.87 | 48.08 |
| HORVU2Hr1G105340.1 | Barley | golgi, peroxisome, plasma membrane | 44.02 | 47.06 |
| CDY54350 | Canola | plasma membrane | 37.32 | 46.99 |
| HORVU2Hr1G105360.5 | Barley | peroxisome | 45.22 | 45.87 |
| CDX75141 | Canola | plasma membrane | 35.89 | 45.18 |
| KRH21843 | Soybean | mitochondrion | 45.22 | 45.0 |
| HORVU2Hr1G105240.3 | Barley | peroxisome | 44.02 | 44.66 |
| HORVU5Hr1G019740.1 | Barley | cytosol, plastid | 28.71 | 36.04 |
| HORVU5Hr1G069880.1 | Barley | plasma membrane | 21.29 | 32.96 |
| HORVU2Hr1G127610.1 | Barley | cytosol, plasma membrane | 8.85 | 31.09 |
| HORVU4Hr1G078220.1 | Barley | endoplasmic reticulum, plasma membrane | 19.62 | 30.15 |
| HORVU4Hr1G078210.1 | Barley | plastid | 25.84 | 27.69 |
| HORVU5Hr1G069920.5 | Barley | cytosol | 18.18 | 27.34 |
| HORVU5Hr1G069960.1 | Barley | cytosol, plasma membrane | 27.51 | 26.68 |
| HORVU5Hr1G069910.2 | Barley | cytosol, peroxisome, plasma membrane | 21.53 | 24.52 |
| HORVU2Hr1G127530.7 | Barley | endoplasmic reticulum, plasma membrane | 19.86 | 23.85 |
| HORVU5Hr1G104050.3 | Barley | cytosol, peroxisome, plasma membrane | 23.68 | 23.74 |
| HORVU5Hr1G088530.5 | Barley | cytosol, endoplasmic reticulum, peroxisome | 23.45 | 23.73 |
| HORVU3Hr1G062690.1 | Barley | plastid | 22.49 | 23.5 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 20.81 | 23.02 |
| HORVU1Hr1G085120.1 | Barley | plastid | 21.53 | 22.5 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 21.29 | 21.87 |
| HORVU1Hr1G085150.1 | Barley | plastid | 20.81 | 20.52 |
| HORVU7Hr1G086680.1 | Barley | mitochondrion | 7.89 | 17.19 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G066740.2 | EnsemblPlantsGene:HORVU6Hr1G066740 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF31 |
| PFAM:PF16913 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000B480BC5 | UniProt:A0A287UHL7 | MapMan:24.2.1.6 |
Description
No Description!
Coordinates
chrchr6H:+:461868803..461871454
Molecular Weight (calculated)
45951.0 Da
IEP (calculated)
8.281
GRAVY (calculated)
0.471
Length
418 amino acids
Sequence
(BLAST)
(BLAST)
001: GFSEQNLIHP IVGRVTQRLT HFLGSILEYY CCNLQPAAAA RTNPMRCDAM RRPASQLTGS SKPAASLAHE APPQSGPVKH WQWWLMVVLN MFFLIAGQTS
101: ATLLGRFYYN EGGNSKWMST FVQTAGFPVL FVAQFLFRPK SPSTQAINSS PEASIIKITL IYIALGLIIA ADDLMYSYGL LYLPVSTYSL ICASQLAFNA
201: VFSYFLNAQK FTPLIFNSVL LLTFSASLLG VDEDSQSTSD TSQGNHVLGF VLTLGASATY SLILSLMQVT FEKVIKRETF SVVLNMQIYT AFVATLASLV
301: GLFASGEWKT LEGEMHVFSS GKVSYVMTLL WTAISWQIAS VGVVGLIFVV SSLFSNVIST LALPIIPVFA VIFFHDKMDG IKIIAMLIAI WGFVSYGYQL
401: YVDDKKSRKT SSSVEENS
101: ATLLGRFYYN EGGNSKWMST FVQTAGFPVL FVAQFLFRPK SPSTQAINSS PEASIIKITL IYIALGLIIA ADDLMYSYGL LYLPVSTYSL ICASQLAFNA
201: VFSYFLNAQK FTPLIFNSVL LLTFSASLLG VDEDSQSTSD TSQGNHVLGF VLTLGASATY SLILSLMQVT FEKVIKRETF SVVLNMQIYT AFVATLASLV
301: GLFASGEWKT LEGEMHVFSS GKVSYVMTLL WTAISWQIAS VGVVGLIFVV SSLFSNVIST LALPIIPVFA VIFFHDKMDG IKIIAMLIAI WGFVSYGYQL
401: YVDDKKSRKT SSSVEENS
001: MAKEPVRVLV TGAAGNQEPI LVKEESVVGI PTPLLKLKSW QWWVLVSVNI FFLIGGQAAS VLLGRFYYDE GGNSKWMATL VQTAAFPILY IPLLLLPSSA
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
101: SVESSESSCS LKYIVLIYVL LGVIIAGDNM LYSVGLLYLS ASTYSLICAT QLAFNAVFSY FINAQKFTAL ILNSVVLLSF SAALIALNDD ADTPSGVSRS
201: KYIVGFVCTL AASALYSLLL SLMQFSFEKI LKRETFSVVL EMQIYTSLVA TCVSVIGLFA SGEWRTLHGE MEGYHKGQAS YVLTLVWTAV TWQVCSVGVV
301: GLIFLVTSLF SNVISTLSLA VTPLAALVVF RDKMSGVKIM AMLIAIWGFA SYVYQNHIDD LKVRQARQQA QAGRVEPPC
Arabidopsis Description
PUP11Probable purine permease 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPF6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.