Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G41160.1 | CDY03233 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | CDY33464 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | CDY35154 | AT5G46240.1 | 15299147 |
| AT5G41160.1 | CDY62359 | AT5G46240.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX75141 | Canola | plasma membrane | 96.69 | 96.69 |
| Bra037874.1-P | Field mustard | plasma membrane | 88.55 | 88.02 |
| AT4G08700.1 | Thale cress | plasma membrane | 71.99 | 66.2 |
| AT5G41160.1 | Thale cress | plasma membrane | 68.67 | 62.64 |
| CDY12545 | Canola | plasma membrane | 47.29 | 52.68 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 45.48 | 50.5 |
| KRH00977 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 52.11 | 47.4 |
| KRH40250 | Soybean | endoplasmic reticulum, plasma membrane, vacuole | 51.2 | 46.96 |
| CDY14989 | Canola | plasma membrane | 58.43 | 46.75 |
| CDX71327 | Canola | plasma membrane | 58.13 | 46.39 |
| GSMUA_Achr5P12690_001 | Banana | plasma membrane | 47.59 | 45.27 |
| VIT_15s0021g00650.t01 | Wine grape | plastid | 50.9 | 44.47 |
| GSMUA_Achr10P... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 38.25 | 42.05 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 45.18 | 41.21 |
| Zm00001d051504_P001 | Maize | golgi, peroxisome, plasma membrane | 47.59 | 41.15 |
| Os02t0689200-03 | Rice | plasma membrane | 47.29 | 40.78 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 45.18 | 40.65 |
| TraesCS6B01G289900.1 | Wheat | peroxisome | 46.99 | 40.1 |
| TraesCS6A01G262900.1 | Wheat | plasma membrane | 46.69 | 39.74 |
| TraesCS6D01G243400.1 | Wheat | golgi, peroxisome, plasma membrane | 46.39 | 39.49 |
| HORVU2Hr1G105300.1 | Barley | peroxisome | 43.98 | 39.04 |
| Zm00001d002515_P001 | Maize | peroxisome | 43.67 | 38.98 |
| EES11332 | Sorghum | peroxisome | 43.67 | 38.77 |
| TraesCS2B01G474100.1 | Wheat | peroxisome | 43.07 | 38.24 |
| TraesCS2D01G452400.1 | Wheat | peroxisome | 43.07 | 38.24 |
| TraesCS5A01G413800.1 | Wheat | peroxisome | 42.77 | 37.97 |
| HORVU6Hr1G066740.2 | Barley | golgi, mitochondrion | 46.99 | 37.32 |
| TraesCS2A01G452600.1 | Wheat | peroxisome | 41.87 | 37.17 |
| Zm00001d003417_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 32.83 | 34.82 |
| CDX90414 | Canola | plasma membrane | 38.86 | 34.4 |
| CDY01525 | Canola | plasma membrane | 38.86 | 34.13 |
| TraesCS2B01G473800.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 35.24 | 33.91 |
| CDX76538 | Canola | plasma membrane | 39.76 | 33.67 |
| EES11334 | Sorghum | peroxisome | 38.55 | 33.6 |
| Os09t0548600-00 | Rice | endoplasmic reticulum, extracellular, vacuole | 34.94 | 33.53 |
| CDY08897 | Canola | plasma membrane | 39.16 | 33.25 |
| CDX99493 | Canola | plasma membrane | 39.16 | 33.16 |
| CDX76537 | Canola | plasma membrane | 38.86 | 33.08 |
| CDX78835 | Canola | plasma membrane | 38.86 | 32.99 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 38.25 | 32.56 |
| TraesCS2B01G473900.1 | Wheat | plasma membrane | 36.75 | 32.02 |
| Zm00001d002514_P001 | Maize | endoplasmic reticulum, peroxisome, plasma membrane | 36.75 | 31.94 |
| CDY08895 | Canola | plasma membrane | 37.65 | 31.65 |
| TraesCS2D01G452200.1 | Wheat | plasma membrane | 36.14 | 31.5 |
| CDX76540 | Canola | plasma membrane | 37.65 | 31.49 |
| TraesCS2A01G452400.1 | Wheat | plasma membrane | 36.14 | 31.41 |
| KXG26473 | Sorghum | cytosol, peroxisome, plasma membrane | 36.45 | 31.03 |
| EES05697 | Sorghum | plastid | 46.69 | 30.94 |
| CDY08900 | Canola | plasma membrane | 28.92 | 30.87 |
| TraesCS2D01G452300.1 | Wheat | peroxisome | 35.54 | 30.81 |
| KXG24673 | Sorghum | peroxisome | 37.95 | 30.73 |
| TraesCS2D01G452100.1 | Wheat | plasma membrane | 36.14 | 30.61 |
| TraesCS2A01G452500.1 | Wheat | peroxisome | 35.24 | 30.23 |
| HORVU2Hr1G105340.1 | Barley | golgi, peroxisome, plasma membrane | 35.24 | 29.92 |
| KXG27004 | Sorghum | golgi, peroxisome, vacuole | 35.24 | 29.7 |
| CDX76536 | Canola | plasma membrane | 26.2 | 29.69 |
| HORVU2Hr1G105360.5 | Barley | peroxisome | 36.75 | 29.61 |
| HORVU2Hr1G105240.3 | Barley | peroxisome | 35.24 | 28.4 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 40.36 | 27.86 |
| TraesCS2A01G452300.1 | Wheat | mitochondrion | 36.45 | 27.69 |
| EES10997 | Sorghum | plasma membrane | 34.64 | 27.58 |
| CDX90135 | Canola | plasma membrane | 26.51 | 27.24 |
| TraesCS2B01G474000.1 | Wheat | cytosol, peroxisome, plasma membrane | 36.14 | 26.85 |
| CDY35721 | Canola | plasma membrane | 25.3 | 26.33 |
| CDX99494 | Canola | plasma membrane | 40.06 | 25.93 |
| CDY29404 | Canola | plasma membrane | 29.52 | 25.72 |
| CDY39353 | Canola | plasma membrane | 29.52 | 25.65 |
| CDY22619 | Canola | plasma membrane | 28.92 | 25.46 |
| CDX93469 | Canola | plasma membrane | 29.52 | 25.39 |
| CDY46618 | Canola | plasma membrane | 17.17 | 25.11 |
| CDX94937 | Canola | plasma membrane | 28.61 | 25.07 |
| CDX90136 | Canola | plasma membrane | 26.51 | 25.0 |
| CDY29403 | Canola | plasma membrane | 28.92 | 24.94 |
| CDX94595 | Canola | plasma membrane | 25.9 | 24.64 |
| CDY39352 | Canola | plasma membrane | 28.92 | 24.62 |
| CDY35722 | Canola | plasma membrane | 26.2 | 24.58 |
| CDX94594 | Canola | extracellular, plasma membrane | 25.3 | 24.07 |
| CDY53149 | Canola | plasma membrane | 28.31 | 23.92 |
| CDX96651 | Canola | plasma membrane | 30.12 | 23.64 |
| CDY29401 | Canola | plasma membrane | 24.1 | 23.26 |
| CDY27947 | Canola | plasma membrane | 24.4 | 23.21 |
| CDY17197 | Canola | extracellular, plasma membrane | 24.4 | 23.08 |
| CDY67986 | Canola | plasma membrane | 25.6 | 22.79 |
| CDY64442 | Canola | plasma membrane | 26.81 | 22.76 |
| CDY72169 | Canola | plasma membrane | 17.17 | 22.53 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 25.3 | 22.16 |
| CDY15687 | Canola | plasma membrane | 20.18 | 22.11 |
| CDY12422 | Canola | plasma membrane | 24.4 | 21.54 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 24.4 | 21.37 |
| CDY29741 | Canola | plasma membrane | 24.1 | 21.22 |
| CDY31805 | Canola | plasma membrane | 28.01 | 20.99 |
| CDY16284 | Canola | plasma membrane | 23.8 | 20.95 |
| CDY63252 | Canola | extracellular | 27.11 | 20.83 |
| CDY09527 | Canola | plasma membrane | 19.58 | 20.31 |
| CDY02338 | Canola | plasma membrane | 19.28 | 20.0 |
| CDY09533 | Canola | plasma membrane | 19.28 | 20.0 |
| HORVU5Hr1G019740.1 | Barley | cytosol, plastid | 19.28 | 19.22 |
| Zm00001d026042_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 36.14 | 17.83 |
| CDX73177 | Canola | plasma membrane | 22.29 | 17.49 |
| CDY63702 | Canola | plasma membrane | 28.92 | 12.52 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDY54350 | EnsemblPlantsGene:GSBRNA2T00013921001 | GO:A0A078IT76 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | ncoils:Coil |
| PANTHER:PTHR31376 | PANTHER:PTHR31376:SF2 | PFAM:PF16913 | ProteinID:CDY54350 | ProteinID:CDY54350.1 | SEG:seg |
| TMHMM:TMhelix | UniParc:UPI0004EE025C | UniProt:A0A078IT76 | MapMan:24.2.1.6 | : | : |
Description
BnaA09g53790DBnaA09g53790D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IT76]
Coordinates
chrLK033307:+:52525..53972
Molecular Weight (calculated)
36900.4 Da
IEP (calculated)
4.811
GRAVY (calculated)
0.660
Length
332 amino acids
Sequence
(BLAST)
(BLAST)
001: MIHPSVNSPL NIDEEESFLL KEEDEASNEE VLPQIMKLKR SQWWIFVSIS IFFLISAQAV AVLLGRFYYD QGGNSKWIST LVQTVGFPIL YLPLCLLPAS
101: PHTSYCSCKT LLIFNAVFSY LINSEKITFW TVMSVFFLTV SALVIALDDD SNSPSGGSKW IYVIGCLLTL LASLIYSLQL SLMQFSFEKI IKRETFAMVL
201: EMQIYTSLVA SCVSVIGLFA SGEWKMLRME MEEFHKGHVS YVLTLVGTAV SWQLGSVSAV ALIFLVSSLF SNLIGTLSLI VTPLAALVVF DDKLTVAKIA
301: AIIFAIPGVA FYMYKNYLDG LKVERASESL AD
101: PHTSYCSCKT LLIFNAVFSY LINSEKITFW TVMSVFFLTV SALVIALDDD SNSPSGGSKW IYVIGCLLTL LASLIYSLQL SLMQFSFEKI IKRETFAMVL
201: EMQIYTSLVA SCVSVIGLFA SGEWKMLRME MEEFHKGHVS YVLTLVGTAV SWQLGSVSAV ALIFLVSSLF SNLIGTLSLI VTPLAALVVF DDKLTVAKIA
301: AIIFAIPGVA FYMYKNYLDG LKVERASESL AD
001: MDEEEAMLLL KEEDEGTRRT SVPTQLMKLK RTHWWILVFI SIFFLISAQA IAVLLGRFYY NEGGNSKWIS TLVQTCGFPI LYLPLCFLPA SHSSSSSCSF
101: KTLVWIYLSL GFAIGLDNLL YSFGLLYLSA STYSILCSSQ LAFNGVFSYY INSQKITCLI LFSVLFLSVS AVLVSLDDDS NSPSGDSKWS YLIGCLCTVF
201: ASLIYSLQLS LMQFSFENVL KSETFSMVLE MQIYTSLVAS CVAVIGLFAS GEWMLLSVEM EEFHEGQVIY VLTLVGTAVS WQLGSVGAVA LIFLVSSLFS
301: NLIGTLSLIV TPLAAIAVFH DKLTEVKMVA MLIAFMGFGF YIYQNYLDDL KVQRAREAQA E
101: KTLVWIYLSL GFAIGLDNLL YSFGLLYLSA STYSILCSSQ LAFNGVFSYY INSQKITCLI LFSVLFLSVS AVLVSLDDDS NSPSGDSKWS YLIGCLCTVF
201: ASLIYSLQLS LMQFSFENVL KSETFSMVLE MQIYTSLVAS CVAVIGLFAS GEWMLLSVEM EEFHEGQVIY VLTLVGTAVS WQLGSVGAVA LIFLVSSLFS
301: NLIGTLSLIV TPLAAIAVFH DKLTEVKMVA MLIAFMGFGF YIYQNYLDDL KVQRAREAQA E
Arabidopsis Description
PUP13Probable purine permease 13 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY83]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.