CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78833	Canola	cytosol, extracellular, plasma membrane	80.12	85.45
AT4G18190.1	Thale cress	plasma membrane	61.21	81.14
CDY08900	Canola	plasma membrane	30.8	50.8
CDX76537	Canola	plasma membrane	36.84	48.46
CDY12545	Canola	plasma membrane	27.88	47.99
CDY08897	Canola	plasma membrane	36.45	47.83
CDY08899	Canola	cytosol, peroxisome, plasma membrane	36.26	47.69
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	27.68	47.49
CDX76538	Canola	plasma membrane	36.06	47.19
CDX78835	Canola	plasma membrane	35.87	47.06
CDX99493	Canola	plasma membrane	35.87	46.94
CDX76536	Canola	plasma membrane	26.32	46.08
CDY01525	Canola	plasma membrane	33.92	46.03
CDX90414	Canola	plasma membrane	33.14	45.33
CDY08895	Canola	plasma membrane	34.31	44.56
CDX76540	Canola	plasma membrane	34.31	44.33
CDY14989	Canola	plasma membrane	32.75	40.48
CDX71327	Canola	plasma membrane	32.55	40.14
CDY54350	Canola	plasma membrane	25.93	40.06
CDX75141	Canola	plasma membrane	25.73	39.76
CDY17197	Canola	extracellular, plasma membrane	21.64	31.62
CDX90136	Canola	plasma membrane	21.64	31.53
CDY27947	Canola	plasma membrane	21.25	31.23
CDY35722	Canola	plasma membrane	21.44	31.07
CDY12422	Canola	plasma membrane	22.22	30.32
CDX94594	Canola	extracellular, plasma membrane	20.47	30.09
CDY29741	Canola	plasma membrane	22.03	29.97
CDY16284	Canola	plasma membrane	22.03	29.97
CDX94595	Canola	plasma membrane	20.27	29.8
CDY15687	Canola	plasma membrane	17.54	29.7
CDX90135	Canola	plasma membrane	18.32	29.1
CDY46618	Canola	plasma membrane	12.48	28.19
CDY35721	Canola	plasma membrane	17.15	27.59
CDY09527	Canola	plasma membrane	17.15	27.5
CDY72169	Canola	plasma membrane	13.45	27.27
CDY53149	Canola	plasma membrane	20.86	27.23
CDY09533	Canola	plasma membrane	16.96	27.19
CDY64442	Canola	plasma membrane	20.66	27.11
CDY39353	Canola	plasma membrane	20.08	26.96
CDX94937	Canola	plasma membrane	19.88	26.91
CDY02338	Canola	plasma membrane	16.57	26.56
CDY22619	Canola	plasma membrane	19.49	26.53
CDY29404	Canola	plasma membrane	19.69	26.51
CDY67986	Canola	plasma membrane	18.91	26.01
CDX93469	Canola	plasma membrane	19.49	25.91
CDY29401	Canola	plasma membrane	17.35	25.87
CDY29403	Canola	plasma membrane	19.3	25.71
CDY63252	Canola	extracellular	21.25	25.23
CDY39352	Canola	plasma membrane	18.52	24.36
CDY34789	Canola	cytosol, peroxisome, plasma membrane	17.54	23.75
CDX76826	Canola	cytosol, peroxisome, plasma membrane	17.54	23.75
CDY31805	Canola	plasma membrane	20.47	23.7
CDX96651	Canola	plasma membrane	19.3	23.4
CDX73177	Canola	plasma membrane	14.43	17.49
CDY63702	Canola	plasma membrane	19.49	13.04
CDX96650	Canola	cytosol, plasma membrane, vacuole	0.0	0.0

Protein Annotations

MapMan:24.2.1.6	GO:A0A078EFA1	EnsemblPlants:CDX99494	ProteinID:CDX99494	ProteinID:CDX99494.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00107862001	PFAM:PF16913	PANTHER:PTHR31376	PANTHER:PTHR31376:SF17	InterPro:PUP_plant
InterPro:Pectin_lyase_fold/virulence	SUPFAM:SSF103481	SUPFAM:SSF51126	TMHMM:TMhelix	UniParc:UPI0004EE0B4F	SEG:seg

Description

BnaC01g10580D

Coordinates

chrLK031910:-:1250641..1253429

Molecular Weight (calculated)

57307.3 Da

IEP (calculated)

6.861

GRAVY (calculated)

0.160

Length

513 amino acids

Sequence
(BLAST)

001: MMIGEFFVKT TFRMMFERSS QGILTDLSRY RSGSGWIDLD VRNTGLTLTG GGTFDRQGAV AWPFNNCKLL PASLKFVGMN RTIARTRLNI TGHGISIISL
101: FVNEPSKVKL SEIYFKNIRG TSSSRVAMEV ESETQELHIH VNGEPERKSS TEQRSHNYSW RLRVSLYVIL LLAGETIATL LGRLYYDKGG NSIWLETLVQ
201: LVGFPLTLPC YYYIKHESSS KNNNLTNKTT TSFLTLPLVY IGLGLLAAGH SVLYSFGLLY LPVSTFSLIS ASQLAFNAVF SYFLNSQKFT PCILNSLVLL
301: TISSTLLVIQ PEPESSTSNS SSKYNYVIGY ICAIGSSAGY SLVLSLTDYA FEKILKKYTF KAILDMVTYQ SFVATCAVVV GLFVSGGWKM LRTEMKEFTL
401: GENSYILINI GAMISWQACW IGSVGLILEV SSLFSNVIST LCLPVVPVLA VVFFRDEMSG IKLIAMFLAI WGFVSYAYQH YVDDPKQEDE KEIPQGEEEE
501: KETQEEKSNN IQD

Best Arabidopsis Sequence Match ( AT4G18190.1 )
(BLAST)

001: MMELESETQE LHLHVNGEPE GKFSTEERSH KYSWRLRVSL YVTLLLAGET IATLLGRLYY EKGGKSTWLE TLVQLVGFPL TLPCYYYLKP EPSKTKTITK
101: KTTSSFLTLS LVYIGLGLLV AGHCILYSFG LLYLPVSTFS LISASQLAFN AVFSYFLNSQ KITPFILNSL VLLTISSTLL VIQHEPESPS STSKSAAKSK
201: YVIGYICAVG SSAGYSLVLS LTDYAFEKIL KKYTFKAILD MATYPSMVAT CVVVVGLFGS GGWKKLSTEM EEFQLGKSSY ILINIGSTIS WQACLIGSVG
301: LIIEVSSLFS NVISTLCLPV VPVLAVVFFR DEMSGIKLVA MFLAIWGFVS YGYQHYVNDR KPEEDQELPQ SKEEEEQKQV DTIHVQA

Arabidopsis Description

PUP6Probable purine permease 6 [Source:UniProtKB/Swiss-Prot;Acc:O49722]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.