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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • plastid 1
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane, plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra032232.1-P Field mustard plasma membrane 100.0 100.0
CDY63252 Canola extracellular 96.68 87.5
AT1G47603.1 Thale cress plasma membrane 79.54 79.13
CDY22619 Canola plasma membrane 42.2 43.77
CDX94937 Canola plasma membrane 41.94 43.27
CDX93469 Canola plasma membrane 42.46 43.01
CDY53149 Canola plasma membrane 42.46 42.24
CDY31805 Canola plasma membrane 41.69 36.79
CDY12545 Canola plasma membrane 24.04 31.54
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 24.04 31.44
CDY29404 Canola plasma membrane 30.18 30.97
CDY29401 Canola plasma membrane 27.11 30.81
CDY39353 Canola plasma membrane 29.92 30.63
CDY67986 Canola plasma membrane 28.39 29.76
CDX96651 Canola plasma membrane 31.2 28.84
CDY29403 Canola plasma membrane 28.39 28.83
CDY39352 Canola plasma membrane 28.39 28.46
CDY54350 Canola plasma membrane 22.76 26.81
CDX75141 Canola plasma membrane 22.51 26.51
CDY01525 Canola plasma membrane 25.58 26.45
CDX90414 Canola plasma membrane 24.55 25.6
CDX78835 Canola plasma membrane 25.58 25.58
CDY14989 Canola plasma membrane 27.11 25.54
CDX71327 Canola plasma membrane 27.11 25.48
CDX99493 Canola plasma membrane 24.81 24.74
CDX76537 Canola plasma membrane 24.55 24.62
CDY08895 Canola plasma membrane 24.81 24.56
CDX76540 Canola plasma membrane 24.81 24.43
CDX76538 Canola plasma membrane 24.3 24.23
CDY08899 Canola cytosol, peroxisome, plasma membrane 24.04 24.1
CDY08900 Canola plasma membrane 18.93 23.79
CDY08897 Canola plasma membrane 23.79 23.79
CDX90136 Canola plasma membrane 20.72 23.01
CDY46618 Canola plasma membrane 13.3 22.91
CDX76536 Canola plasma membrane 17.14 22.87
CDX78833 Canola cytosol, extracellular, plasma membrane 27.88 22.66
CDX90135 Canola plasma membrane 18.67 22.6
CDY35722 Canola plasma membrane 19.95 22.03
CDY35721 Canola plasma membrane 17.9 21.94
CDY29741 Canola plasma membrane 20.72 21.49
CDY17197 Canola extracellular, plasma membrane 19.18 21.37
CDY12422 Canola plasma membrane 20.46 21.28
CDY16284 Canola plasma membrane 20.46 21.22
CDX73177 Canola plasma membrane 22.76 21.04
CDY27947 Canola plasma membrane 18.67 20.92
CDX76826 Canola cytosol, peroxisome, plasma membrane 20.2 20.84
CDX99494 Canola plasma membrane 27.11 20.66
CDY15687 Canola plasma membrane 15.86 20.46
CDY34789 Canola cytosol, peroxisome, plasma membrane 19.69 20.32
CDX94594 Canola extracellular, plasma membrane 17.65 19.77
CDX94595 Canola plasma membrane 17.39 19.48
CDY02338 Canola plasma membrane 15.35 18.75
CDY09533 Canola plasma membrane 14.83 18.12
CDY09527 Canola plasma membrane 14.83 18.12
CDY72169 Canola plasma membrane 11.25 17.39
CDY63702 Canola plasma membrane 30.69 15.65
CDX96650 Canola cytosol, plasma membrane, vacuole 0.77 1.91
Protein Annotations
MapMan:24.2.1.6GO:A0A078JDL4UniProt:A0A078JDL4EnsemblPlants:CDY64442ProteinID:CDY64442ProteinID:CDY64442.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00041233001PFAM:PF16913PANTHER:PTHR31376PANTHER:PTHR31376:SF34InterPro:PUP_plant
TMHMM:TMhelixUniParc:UPI0002547D8BSEG:seg:::
Description
BnaA05g36550DBnaA05g36550D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDL4]
Coordinates
chrLK034464:+:17098..18369
Molecular Weight (calculated)
43629.1 Da
IEP (calculated)
8.182
GRAVY (calculated)
0.392
Length
391 amino acids
Sequence
(BLAST)
001: MGFDTESPDR ITQEGEEANV GVENQPKAAP NLTALDQPQT IKTRNWWIWI FVSSGLVVTG RVFSTLLLNF YFVQTGRDVC DDPKQFKGTW LQSMVQNAAF
101: PFTAFFAFLW RSLSSNHRET ITSSASSFGK LFLLYISLGV LFAAYSQLYA IGRTHCIFFF WIFTTQLIFT SMFTAIINKH KFNRWIILSV ILSGVATGIT
201: SSEDAYNPCE GEGYKMSYGA WCGFFGTVAF SLSLCIMQLG FEKVIPKTES KVSSVMLMQT YASMIATLIC LVGLFVSGEF RDIKEDFETF KKGKPLYVLT
301: LTGLSLAWQV MSIGLVGLVC LVSTLFSNVV SFCATPLANI LVVVAFRFMD DDIEWFKGGA LLAGILGFAS YAYSLYKTVK KRASQSETLR V
Best Arabidopsis Sequence Match ( AT1G47603.1 )
(BLAST)
001: MGFHTKSPDR VTHEEEEANI GVDNQPRETT STSLNRSQII KTRNWWICIF VCSCLVVAGR VLSTLLLNFY FIQTGRDVCD DPKQFKGTWL QSMVQNAAFP
101: FTAFLLLLWR SSFSTHSETS SSSSSFGKLF LLYISLGVLF AAYSQLYAIG RTHCVFFLWI FTSQLIFTSI FTTIINKQKF NRWIILSMVL SGAATGLGIT
201: SSGGAYIPCE NEGSKMSNGA WCAFFGTVAF SLSLCIMQLG FQKVIPTTQS RVSAVILMQT NASMIATLIC LVGLFVSGEF KDIKEDFETF KKGKPLYVLS
301: LIGLSLAWQV MSLGLVGLVC LASSLFSNVV SFCSTPLVNI LLVLAFRFTD ADVKFFKEGA LVAGILGFAS YVYSLYKSTK KKEIASQSQT TRV
Arabidopsis Description
ATPUP19purine permease 19 [Source:TAIR;Acc:AT1G47603]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.