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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY29404 Canola plasma membrane 39.48 43.83
CDY39353 Canola plasma membrane 39.24 43.46
CDY29403 Canola plasma membrane 37.35 41.04
CDY39352 Canola plasma membrane 36.88 40.0
CDY67986 Canola plasma membrane 34.75 39.41
CDY29401 Canola plasma membrane 31.91 39.24
CDX96651 Canola plasma membrane 37.35 37.35
AT1G75470.1 Thale cress plasma membrane 32.62 35.66
CDX94937 Canola plasma membrane 22.46 25.07
CDX93469 Canola plasma membrane 22.46 24.61
CDY22619 Canola plasma membrane 21.51 24.14
CDY12545 Canola plasma membrane 16.78 23.83
CDY53149 Canola plasma membrane 21.99 23.66
CDY63702 Canola plasma membrane 42.08 23.21
CDY64442 Canola plasma membrane 21.04 22.76
CDX75141 Canola plasma membrane 17.73 22.59
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 15.84 22.41
CDY54350 Canola plasma membrane 17.49 22.29
CDX90136 Canola plasma membrane 17.73 21.31
CDY31805 Canola plasma membrane 21.99 20.99
CDY01525 Canola plasma membrane 18.44 20.63
CDY35722 Canola plasma membrane 17.26 20.62
CDY63252 Canola extracellular 21.04 20.6
CDX90414 Canola plasma membrane 18.2 20.53
CDX90135 Canola plasma membrane 15.6 20.43
CDX76540 Canola plasma membrane 18.91 20.15
CDY08895 Canola plasma membrane 18.68 20.0
CDY46618 Canola plasma membrane 10.64 19.82
CDY08899 Canola cytosol, peroxisome, plasma membrane 17.49 18.97
CDY08897 Canola plasma membrane 17.49 18.93
CDY35721 Canola plasma membrane 14.18 18.81
CDX76537 Canola plasma membrane 17.26 18.72
CDX78835 Canola plasma membrane 17.26 18.67
CDX94594 Canola extracellular, plasma membrane 15.37 18.62
CDY27947 Canola plasma membrane 15.37 18.62
CDX94595 Canola plasma membrane 15.37 18.62
CDX76538 Canola plasma membrane 17.26 18.62
CDX99493 Canola plasma membrane 17.02 18.37
CDY14989 Canola plasma membrane 17.97 18.31
CDX71327 Canola plasma membrane 17.97 18.27
CDY17197 Canola extracellular, plasma membrane 14.89 17.95
CDY29741 Canola plasma membrane 15.84 17.77
CDX76536 Canola plasma membrane 12.06 17.41
CDY15687 Canola plasma membrane 12.29 17.16
CDY08900 Canola plasma membrane 12.53 17.04
CDY12422 Canola plasma membrane 15.13 17.02
CDY16284 Canola plasma membrane 15.13 16.98
CDY09533 Canola plasma membrane 12.29 16.25
CDY09527 Canola plasma membrane 12.29 16.25
CDX78833 Canola cytosol, extracellular, plasma membrane 18.44 16.22
CDY72169 Canola plasma membrane 9.69 16.21
CDY02338 Canola plasma membrane 11.58 15.31
CDY34789 Canola cytosol, peroxisome, plasma membrane 13.0 14.51
CDX99494 Canola plasma membrane 17.49 14.43
CDX76826 Canola cytosol, peroxisome, plasma membrane 12.77 14.25
CDX96650 Canola cytosol, plasma membrane, vacuole 3.31 8.92
Protein Annotations
EnsemblPlants:CDX73177EnsemblPlantsGene:GSBRNA2T00103666001GO:A0A078C8K7GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF34PFAM:PF16913ProteinID:CDX73177ProteinID:CDX73177.1SEG:segTMHMM:TMhelix
UniParc:UPI0004EEEB5EMapMan:24.2.1.6::::
Description
BnaC06g36250DPutative purine permease 15 [Source:Projected from Arabidopsis thaliana (AT1G75470) UniProtKB/Swiss-Prot;Acc:Q9LQZ0]
Coordinates
chrLK031797:+:2499889..2502367
Molecular Weight (calculated)
48014.2 Da
IEP (calculated)
7.287
GRAVY (calculated)
0.544
Length
423 amino acids
Sequence
(BLAST)
001: MEVDTTTQII NETGEPINLA TIITCTIFVI TGQCIARPLE TFHNHHNFYQ SLHDGVWTQP FLQVIGFPLL LVPFFSLSYK KHNQLLITSK PSSLSLLYIC
101: TGVTMLVQSP FTKLLLIDGT RIYFTPIFAA IIKRIEFNTW IVISLIYTIA ITTLSSYVGG ELSALLAALT FIFLLGNIEK IFDVYISKGN KKLNPIFADV
201: LELLIFSSLF ATLAAVFISG ENHDLMREME GFSKGKIVYV MTTVGQVVSW QIYWVGIVGL VAFSESIVTS NLVSFSPYPI IMVLEIFFFN YEDDEFDGYL
301: GVALVLSVFI VVSSLYKTRC KHVREQFVQI SLEIEPLQNS DSNHRRNKWL TIIICIILAV TGQSAVRLLE NYYFLHRNRN FRYGVWTQSL LQVVGFPILL
401: FPFVLLHLSC NKKKQLIMTS DGI
Best Arabidopsis Sequence Match ( AT1G19770.1 )
(BLAST)
001: MAQNQQPIFQ TKPPEQFVQI PINIERDSST TRMNQTGNTI RKPNHWPTIT ISIIFVIIGQ SIAKLLENFY YDKTNRSEYN ENRQNDGVWT QSLLQTVGFP
101: LLLLPFLIFI TKNKRNHHQQ PPITSDSIHL KSLAVIYICI GIIMSVQGRL AAMGKLEIPF GVFTLIYTAQ LFFTPIFAAF INKIKFNRWV VISVILAIIT
201: GALTLSSSFG GEPDEAEENY ARGSWAALFA GICFALLLCN IQNVFDSYIF KRTESTNQKP SFASVFEVII FSSLVATIIS VVGLLIAGEQ HDLKREMNGF
301: SKGKGSYVMA MVGQAVSWQV YWVGIVGLVY SVSSVLSNVI SVITWPIVSV LVVIFFNFMD DEFDAFKGVA LVTAVLSAAA YFFRLHKDNR MAY
Arabidopsis Description
PUP14PUP14 [Source:UniProtKB/TrEMBL;Acc:A0A178WHV5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.