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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 2
  • extracellular 3
  • endoplasmic reticulum 3
  • vacuole 3
  • plasma membrane 5
  • golgi 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX90135 Canola plasma membrane 94.98 93.81
CDY46618 Canola plasma membrane 53.6 75.33
AT1G28230.1 Thale cress plasma membrane 74.61 66.85
CDY35722 Canola plasma membrane 73.98 66.67
CDX90136 Canola plasma membrane 73.04 66.19
CDY72169 Canola plasma membrane 45.45 57.31
CDY27947 Canola plasma membrane 57.37 52.44
CDY17197 Canola extracellular, plasma membrane 56.43 51.28
VIT_18s0001g06950.t01 Wine grape plasma membrane 54.55 49.86
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 54.55 49.57
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 26.33 49.41
CDY29741 Canola plasma membrane 58.31 49.34
CDY12422 Canola plasma membrane 57.68 48.94
CDY16284 Canola plasma membrane 57.68 48.81
VIT_18s0001g06910.t01 Wine grape plasma membrane 53.6 48.72
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 54.23 48.46
KRH72416 Soybean endoplasmic reticulum, plasma membrane 51.72 47.97
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 17.87 47.9
KRH52994 Soybean cytosol, nucleus, plasma membrane 50.78 46.96
CDX94595 Canola plasma membrane 51.1 46.7
CDX94594 Canola extracellular, plasma membrane 51.1 46.7
PGSC0003DMT400036604 Potato extracellular, plasma membrane 47.96 44.61
PGSC0003DMT400072048 Potato extracellular, plasma membrane 37.93 44.49
Solyc12g087870.1.1 Tomato plasma membrane 49.53 44.38
CDY15687 Canola plasma membrane 42.01 44.22
PGSC0003DMT400071864 Potato plasma membrane 46.71 43.7
Solyc07g008440.2.1 Tomato plasma membrane 50.16 43.6
PGSC0003DMT400005470 Potato extracellular, plasma membrane 48.28 43.5
PGSC0003DMT400054207 Potato plasma membrane 23.82 42.94
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 44.2 42.86
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 47.02 42.37
PGSC0003DMT400039797 Potato mitochondrion 23.2 42.29
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 43.89 41.54
HORVU5Hr1G069880.1 Barley plasma membrane 34.8 41.11
TraesCS5A01G247600.1 Wheat plasma membrane 45.45 38.46
TraesCS5B01G244800.1 Wheat plasma membrane 45.14 38.2
TraesCS5D01G254100.1 Wheat plasma membrane 44.83 37.93
PGSC0003DMT400005467 Potato plasma membrane 41.69 37.78
Solyc04g074880.2.1 Tomato plasma membrane 41.69 37.46
KXG35809 Sorghum plasma membrane 45.45 37.28
TraesCS5B01G431200.2 Wheat plasma membrane 44.51 36.88
TraesCS5A01G429100.1 Wheat plasma membrane 44.2 36.62
TraesCS5D01G437200.1 Wheat plasma membrane 44.2 36.53
TraesCS2B01G617100.1 Wheat plasma membrane 41.07 36.09
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 43.57 35.64
TraesCS5A01G247700.1 Wheat plasma membrane 40.44 34.13
PGSC0003DMT400085139 Potato mitochondrion 41.07 33.85
TraesCS5B01G244900.1 Wheat plasma membrane 39.19 32.98
TraesCS5D01G254200.2 Wheat plasma membrane 41.38 32.2
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 41.69 31.89
TraesCS5B01G245000.1 Wheat plasma membrane 27.59 31.65
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 41.69 30.86
CDY12545 Canola plasma membrane 26.33 28.19
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 26.33 28.09
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 29.47 27.01
CDY54350 Canola plasma membrane 26.33 25.3
CDX75141 Canola plasma membrane 25.71 24.7
CDY09527 Canola plasma membrane 24.14 24.06
CDY02338 Canola plasma membrane 24.14 24.06
CDY09533 Canola plasma membrane 23.82 23.75
CDX76826 Canola cytosol, peroxisome, plasma membrane 28.21 23.75
CDY34789 Canola cytosol, peroxisome, plasma membrane 28.21 23.75
CDY14989 Canola plasma membrane 29.78 22.89
CDX71327 Canola plasma membrane 29.47 22.6
CDX90414 Canola plasma membrane 26.02 22.13
CDY01525 Canola plasma membrane 25.71 21.69
CDY08900 Canola plasma membrane 20.69 21.22
CDX78835 Canola plasma membrane 25.39 20.72
CDX76537 Canola plasma membrane 25.08 20.51
CDY08899 Canola cytosol, peroxisome, plasma membrane 24.76 20.26
CDX99493 Canola plasma membrane 24.14 19.64
CDX76538 Canola plasma membrane 23.82 19.39
CDY08895 Canola plasma membrane 23.82 19.24
CDY08897 Canola plasma membrane 23.51 19.18
CDX76540 Canola plasma membrane 23.82 19.14
CDX78833 Canola cytosol, extracellular, plasma membrane 28.21 18.71
CDY29404 Canola plasma membrane 21.63 18.11
CDY64442 Canola plasma membrane 21.94 17.9
CDY39353 Canola plasma membrane 21.0 17.54
CDX93469 Canola plasma membrane 21.0 17.36
CDY22619 Canola plasma membrane 20.38 17.24
CDX99494 Canola plasma membrane 27.59 17.15
CDX94937 Canola plasma membrane 20.38 17.15
CDY29401 Canola plasma membrane 17.87 16.57
CDY63252 Canola extracellular 21.94 16.2
HORVU7Hr1G086680.1 Barley mitochondrion 9.72 16.15
CDY29403 Canola plasma membrane 19.44 16.1
CDY67986 Canola plasma membrane 18.81 16.09
CDX76536 Canola plasma membrane 14.73 16.04
CDY39352 Canola plasma membrane 19.44 15.9
CDY53149 Canola plasma membrane 19.44 15.78
CDX96651 Canola plasma membrane 20.69 15.6
CDX73177 Canola plasma membrane 18.81 14.18
CDY31805 Canola plasma membrane 19.44 14.0
CDY63702 Canola plasma membrane 21.63 9.0
CDX96650 Canola cytosol, plasma membrane, vacuole 0.63 1.27
Protein Annotations
EnsemblPlants:CDY35721EnsemblPlantsGene:GSBRNA2T00059146001GO:A0A078HDD1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376
PANTHER:PTHR31376:SF1PFAM:PF16913ProteinID:CDY35721ProteinID:CDY35721.1TMHMM:TMhelixUniParc:UPI0004EDDDD9
UniProt:A0A078HDD1MapMan:24.2.1.6::::
Description
BnaC03g58420DBnaC03g58420D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HDD1]
Coordinates
chrLK032359:-:25861..27650
Molecular Weight (calculated)
35102.0 Da
IEP (calculated)
9.325
GRAVY (calculated)
0.713
Length
319 amino acids
Sequence
(BLAST)
001: MMKNGLLIIV TCGGPLLTRL YYTKGGSRIW FMSFLATAGC PIILIPLYVS FLRLSNRSHN NSETTEKAKV FVMETPLFIA YPSLSAFNAI FSFLMVKQKF
101: TPFSINAVVL LTVGTGILAL HTNGDRPAGV SKKEYVVGFM LTLIAAVLYA FLMPLVELTY KKVRQEITFT LVLEMQMVMC VASTCFCLVG MVVKGDFKAI
201: PREAREFMIG SSLFYYTLIV VIGIVWQCFF LGAFGVVYCA SSLTSGVFVS VLLPVTEVLA VVCFREKFQA KKGVALLLSL WGFVSYFSGE FKSGKKIIDS
301: PKSPETELPP LPVSGSDVA
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.