Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032232.1-P | Field mustard | plasma membrane | 87.5 | 96.68 |
| CDY64442 | Canola | plasma membrane | 87.5 | 96.68 |
| AT1G47603.1 | Thale cress | plasma membrane | 71.3 | 78.37 |
| CDX94937 | Canola | plasma membrane | 37.96 | 43.27 |
| CDY22619 | Canola | plasma membrane | 37.73 | 43.24 |
| CDX93469 | Canola | plasma membrane | 38.43 | 43.01 |
| CDY53149 | Canola | plasma membrane | 38.43 | 42.24 |
| CDY31805 | Canola | plasma membrane | 38.89 | 37.92 |
| CDY12545 | Canola | plasma membrane | 21.99 | 31.88 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.99 | 31.77 |
| CDY29404 | Canola | plasma membrane | 28.01 | 31.76 |
| CDY39353 | Canola | plasma membrane | 27.78 | 31.41 |
| CDY29401 | Canola | plasma membrane | 24.77 | 31.1 |
| CDY67986 | Canola | plasma membrane | 25.93 | 30.03 |
| CDX96651 | Canola | plasma membrane | 28.94 | 29.55 |
| CDY29403 | Canola | plasma membrane | 26.16 | 29.35 |
| CDY39352 | Canola | plasma membrane | 26.39 | 29.23 |
| CDY01525 | Canola | plasma membrane | 23.84 | 27.25 |
| CDY54350 | Canola | plasma membrane | 20.83 | 27.11 |
| CDX75141 | Canola | plasma membrane | 20.37 | 26.51 |
| CDX90414 | Canola | plasma membrane | 22.92 | 26.4 |
| CDY14989 | Canola | plasma membrane | 25.23 | 26.27 |
| CDX71327 | Canola | plasma membrane | 25.23 | 26.2 |
| CDX78835 | Canola | plasma membrane | 23.15 | 25.58 |
| CDY08895 | Canola | plasma membrane | 23.15 | 25.32 |
| CDX76540 | Canola | plasma membrane | 23.15 | 25.19 |
| CDX99493 | Canola | plasma membrane | 22.45 | 24.74 |
| CDX76537 | Canola | plasma membrane | 22.22 | 24.62 |
| CDX76538 | Canola | plasma membrane | 21.99 | 24.23 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 21.76 | 24.1 |
| CDY08900 | Canola | plasma membrane | 17.13 | 23.79 |
| CDY08897 | Canola | plasma membrane | 21.53 | 23.79 |
| CDX90136 | Canola | plasma membrane | 18.98 | 23.3 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 25.69 | 23.08 |
| CDX76536 | Canola | plasma membrane | 15.51 | 22.87 |
| CDX90135 | Canola | plasma membrane | 16.9 | 22.6 |
| CDY46618 | Canola | plasma membrane | 11.81 | 22.47 |
| CDY35722 | Canola | plasma membrane | 18.29 | 22.32 |
| CDY35721 | Canola | plasma membrane | 16.2 | 21.94 |
| CDY17197 | Canola | extracellular, plasma membrane | 17.82 | 21.94 |
| CDY27947 | Canola | plasma membrane | 17.36 | 21.49 |
| CDY29741 | Canola | plasma membrane | 18.75 | 21.49 |
| CDY12422 | Canola | plasma membrane | 18.52 | 21.28 |
| CDX99494 | Canola | plasma membrane | 25.23 | 21.25 |
| CDY16284 | Canola | plasma membrane | 18.52 | 21.22 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 18.52 | 21.11 |
| CDX73177 | Canola | plasma membrane | 20.6 | 21.04 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 18.29 | 20.84 |
| CDY15687 | Canola | plasma membrane | 14.58 | 20.79 |
| CDX94594 | Canola | extracellular, plasma membrane | 16.2 | 20.06 |
| CDX94595 | Canola | plasma membrane | 15.97 | 19.77 |
| CDY02338 | Canola | plasma membrane | 13.89 | 18.75 |
| CDY09533 | Canola | plasma membrane | 13.43 | 18.12 |
| CDY09527 | Canola | plasma membrane | 13.43 | 18.12 |
| CDY72169 | Canola | plasma membrane | 10.42 | 17.79 |
| CDY63702 | Canola | plasma membrane | 28.47 | 16.04 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.69 | 1.91 |
Protein Annotations
| EnsemblPlants:CDY63252 | EnsemblPlantsGene:GSBRNA2T00038075001 | GO:A0A078JDW8 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF34 | PFAM:PF16913 | ProteinID:CDY63252 | ProteinID:CDY63252.1 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0004EEBA3F | UniProt:A0A078JDW8 | MapMan:24.2.1.6 | : | : |
Description
BnaCnng41760DBnaCnng41760D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDW8]
Coordinates
chrLK034270:+:32116..33667
Molecular Weight (calculated)
48215.7 Da
IEP (calculated)
8.297
GRAVY (calculated)
0.430
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MVLSFILTLV VANFLSIQFG ESYIYFAFHQ KLVVHSPPEN VMGFDTESSD RITQEGEEAN VGVENQPREA PNSTSLDQLQ TIKTRNWWIW IFVSSGLVVT
101: GRVFSTLLLN FYFVQTGRDV CDDPKQFKGT WLQSMVQNAA FPFTALFAFL WCSLSSNHRK TITSSASSSG KLFLLYISLG VLFAAYSQLY AIGRTHCIFF
201: FWIFTTQLIF TSMFTAIINK HKFNRWIILS VILSGVATGV TSSDDAYNPC EGEGYKMSYG AWCGFFGTVA FSLSLCIMQL GFEKVIPKTE SKVSSVMLMQ
301: TYASMIATLI CLVGLFVSGE FRDIKKDFET FKKGKPLYVL TLTGLSLAWQ VMSIGLVGLV CLVSTLFSNV VSFCATPLAN ILVVVAFRFM DDDIEWFKGG
401: ALLAGILGFA SYAYSLYKTV KKRASQSETL RV
101: GRVFSTLLLN FYFVQTGRDV CDDPKQFKGT WLQSMVQNAA FPFTALFAFL WCSLSSNHRK TITSSASSSG KLFLLYISLG VLFAAYSQLY AIGRTHCIFF
201: FWIFTTQLIF TSMFTAIINK HKFNRWIILS VILSGVATGV TSSDDAYNPC EGEGYKMSYG AWCGFFGTVA FSLSLCIMQL GFEKVIPKTE SKVSSVMLMQ
301: TYASMIATLI CLVGLFVSGE FRDIKKDFET FKKGKPLYVL TLTGLSLAWQ VMSIGLVGLV CLVSTLFSNV VSFCATPLAN ILVVVAFRFM DDDIEWFKGG
401: ALLAGILGFA SYAYSLYKTV KKRASQSETL RV
001: MGFHTKSPDR VTHEEEEANI GVDNQPRETT STSLNRSQII KTRNWWICIF VCSCLVVAGR VLSTLLLNFY FIQTGRDVCD DPKQFKGTWL QSMVQNAAFP
101: FTAFLLLLWR SSFSTHSETS SSSSSFGKLF LLYISLGVLF AAYSQLYAIG RTHCVFFLWI FTSQLIFTSI FTTIINKQKF NRWIILSMVL SGAATGLGIT
201: SSGGAYIPCE NEGSKMSNGA WCAFFGTVAF SLSLCIMQLG FQKVIPTTQS RVSAVILMQT NASMIATLIC LVGLFVSGEF KDIKEDFETF KKGKPLYVLS
301: LIGLSLAWQV MSLGLVGLVC LASSLFSNVV SFCSTPLVNI LLVLAFRFTD ADVKFFKEGA LVAGILGFAS YVYSLYKSTK KKEIASQSQT TRV
101: FTAFLLLLWR SSFSTHSETS SSSSSFGKLF LLYISLGVLF AAYSQLYAIG RTHCVFFLWI FTSQLIFTSI FTTIINKQKF NRWIILSMVL SGAATGLGIT
201: SSGGAYIPCE NEGSKMSNGA WCAFFGTVAF SLSLCIMQLG FQKVIPTTQS RVSAVILMQT NASMIATLIC LVGLFVSGEF KDIKEDFETF KKGKPLYVLS
301: LIGLSLAWQV MSLGLVGLVC LASSLFSNVV SFCSTPLVNI LLVLAFRFTD ADVKFFKEGA LVAGILGFAS YVYSLYKSTK KKEIASQSQT TRV
Arabidopsis Description
ATPUP19purine permease 19 [Source:TAIR;Acc:AT1G47603]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.