Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29404 | Canola | plasma membrane | 94.76 | 95.01 |
| AT1G19770.1 | Thale cress | plasma membrane | 83.77 | 81.42 |
| CDY39352 | Canola | plasma membrane | 81.94 | 80.26 |
| CDY29403 | Canola | plasma membrane | 80.63 | 80.0 |
| CDX96651 | Canola | plasma membrane | 85.34 | 77.07 |
| CDY29401 | Canola | plasma membrane | 62.04 | 68.9 |
| CDY67986 | Canola | plasma membrane | 66.23 | 67.83 |
| CDY63702 | Canola | plasma membrane | 87.17 | 43.42 |
| CDX73177 | Canola | plasma membrane | 43.46 | 39.24 |
| CDX94937 | Canola | plasma membrane | 33.77 | 34.04 |
| CDX93469 | Canola | plasma membrane | 33.51 | 33.16 |
| CDY53149 | Canola | plasma membrane | 34.03 | 33.08 |
| CDY22619 | Canola | plasma membrane | 32.2 | 32.63 |
| CDY12545 | Canola | plasma membrane | 24.08 | 30.87 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 23.56 | 30.1 |
| CDY64442 | Canola | plasma membrane | 30.63 | 29.92 |
| CDY31805 | Canola | plasma membrane | 34.29 | 29.57 |
| CDX75141 | Canola | plasma membrane | 25.65 | 29.52 |
| CDY54350 | Canola | plasma membrane | 25.65 | 29.52 |
| CDY63252 | Canola | extracellular | 31.41 | 27.78 |
| CDX90414 | Canola | plasma membrane | 27.23 | 27.73 |
| CDY01525 | Canola | plasma membrane | 27.23 | 27.51 |
| CDY08897 | Canola | plasma membrane | 27.23 | 26.6 |
| CDX76537 | Canola | plasma membrane | 26.96 | 26.41 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 26.96 | 26.41 |
| CDX76538 | Canola | plasma membrane | 26.96 | 26.28 |
| CDX99493 | Canola | plasma membrane | 26.44 | 25.77 |
| CDX78835 | Canola | plasma membrane | 25.65 | 25.06 |
| CDY08895 | Canola | plasma membrane | 25.92 | 25.06 |
| CDX76540 | Canola | plasma membrane | 25.92 | 24.94 |
| CDX76536 | Canola | plasma membrane | 19.11 | 24.91 |
| CDX90136 | Canola | plasma membrane | 22.77 | 24.72 |
| CDY14989 | Canola | plasma membrane | 26.7 | 24.58 |
| CDY08900 | Canola | plasma membrane | 19.9 | 24.44 |
| CDX71327 | Canola | plasma membrane | 26.44 | 24.28 |
| CDX94594 | Canola | extracellular, plasma membrane | 21.99 | 24.07 |
| CDY35722 | Canola | plasma membrane | 22.25 | 24.01 |
| CDX94595 | Canola | plasma membrane | 21.73 | 23.78 |
| CDY15687 | Canola | plasma membrane | 18.59 | 23.43 |
| CDX90135 | Canola | plasma membrane | 19.11 | 22.6 |
| CDY27947 | Canola | plasma membrane | 20.42 | 22.35 |
| CDY17197 | Canola | extracellular, plasma membrane | 20.42 | 22.22 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 27.49 | 21.83 |
| CDY46618 | Canola | plasma membrane | 12.57 | 21.15 |
| CDY12422 | Canola | plasma membrane | 20.68 | 21.01 |
| CDY35721 | Canola | plasma membrane | 17.54 | 21.0 |
| CDY29741 | Canola | plasma membrane | 20.68 | 20.95 |
| CDY16284 | Canola | plasma membrane | 20.42 | 20.69 |
| CDY72169 | Canola | plasma membrane | 13.61 | 20.55 |
| CDX99494 | Canola | plasma membrane | 26.96 | 20.08 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 18.59 | 18.73 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 18.32 | 18.47 |
| CDY09533 | Canola | plasma membrane | 13.87 | 16.56 |
| CDY09527 | Canola | plasma membrane | 13.87 | 16.56 |
| CDY02338 | Canola | plasma membrane | 13.61 | 16.25 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.52 | 1.27 |
Protein Annotations
| EnsemblPlants:CDY39353 | EnsemblPlantsGene:GSBRNA2T00067794001 | GO:A0A078HRH0 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF34 | PFAM:PF16913 | ProteinID:CDY39353 | ProteinID:CDY39353.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0004EDC8CA | UniProt:A0A078HRH0 | MapMan:24.2.1.6 | : | : | : |
Description
BnaC05g15340DBnaC05g15340D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HRH0]
Coordinates
chrLK032446:-:169663..171001
Molecular Weight (calculated)
42865.4 Da
IEP (calculated)
8.294
GRAVY (calculated)
0.396
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MAQNQPIFQI KPEEHFVQIP VSIERDSTTL INSNRKPNHW PTILLSTICV IIGQSIAKLL ENFYYDKINR SEYNEHRQND GVWTQALLQT VGFPLLLLPF
101: IILTAKKHNQ PSSDQFHYKS LAVIYICMGI VMSVQGRLSA MGKLEIPFGI FTLIYTTQLF FTPIFARFVN KIKFNRWVVI SLVLAIVTGA LTLSSSFGGE
201: PDEAELNYAR GSWAALLAAL CFSLLLCNIQ NVFDSYIFRR TESTTRNPSF SSVFEVIIFS SLVATLISMV GLLIAGEQHD LKTEMNGFPK GKGSYVMAMV
301: GQAVSWQIYW VGTVGLVFSV SSVLSNVISV VTWPIVSVLV VIFFNYMDDE LDVFKGVALI TAVLSAAAYF FRLHKENRNS AY
101: IILTAKKHNQ PSSDQFHYKS LAVIYICMGI VMSVQGRLSA MGKLEIPFGI FTLIYTTQLF FTPIFARFVN KIKFNRWVVI SLVLAIVTGA LTLSSSFGGE
201: PDEAELNYAR GSWAALLAAL CFSLLLCNIQ NVFDSYIFRR TESTTRNPSF SSVFEVIIFS SLVATLISMV GLLIAGEQHD LKTEMNGFPK GKGSYVMAMV
301: GQAVSWQIYW VGTVGLVFSV SSVLSNVISV VTWPIVSVLV VIFFNYMDDE LDVFKGVALI TAVLSAAAYF FRLHKENRNS AY
001: MAQNQQPIFQ TKPPEQFVQI PINIERDSST TRMNQTGNTI RKPNHWPTIT ISIIFVIIGQ SIAKLLENFY YDKTNRSEYN ENRQNDGVWT QSLLQTVGFP
101: LLLLPFLIFI TKNKRNHHQQ PPITSDSIHL KSLAVIYICI GIIMSVQGRL AAMGKLEIPF GVFTLIYTAQ LFFTPIFAAF INKIKFNRWV VISVILAIIT
201: GALTLSSSFG GEPDEAEENY ARGSWAALFA GICFALLLCN IQNVFDSYIF KRTESTNQKP SFASVFEVII FSSLVATIIS VVGLLIAGEQ HDLKREMNGF
301: SKGKGSYVMA MVGQAVSWQV YWVGIVGLVY SVSSVLSNVI SVITWPIVSV LVVIFFNFMD DEFDAFKGVA LVTAVLSAAA YFFRLHKDNR MAY
101: LLLLPFLIFI TKNKRNHHQQ PPITSDSIHL KSLAVIYICI GIIMSVQGRL AAMGKLEIPF GVFTLIYTAQ LFFTPIFAAF INKIKFNRWV VISVILAIIT
201: GALTLSSSFG GEPDEAEENY ARGSWAALFA GICFALLLCN IQNVFDSYIF KRTESTNQKP SFASVFEVII FSSLVATIIS VVGLLIAGEQ HDLKREMNGF
301: SKGKGSYVMA MVGQAVSWQV YWVGIVGLVY SVSSVLSNVI SVITWPIVSV LVVIFFNFMD DEFDAFKGVA LVTAVLSAAA YFFRLHKDNR MAY
Arabidopsis Description
PUP14PUP14 [Source:UniProtKB/TrEMBL;Acc:A0A178WHV5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.