Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- plasma membrane 4
- extracellular 1
- golgi 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18205.1 | CDX70995 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDX88803 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDX92368 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDY09128 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | CDY35676 | AT5G22290.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01525 | Canola | plasma membrane | 96.53 | 95.77 |
| AT4G18205.1 | Thale cress | plasma membrane | 83.47 | 83.02 |
| AT4G18197.1 | Thale cress | plasma membrane | 83.73 | 80.51 |
| CDY08895 | Canola | plasma membrane | 74.4 | 70.63 |
| CDX76540 | Canola | plasma membrane | 74.67 | 70.53 |
| CDY08900 | Canola | plasma membrane | 43.73 | 52.73 |
| CDX76537 | Canola | plasma membrane | 53.87 | 51.79 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 53.6 | 51.54 |
| CDY08897 | Canola | plasma membrane | 52.53 | 50.38 |
| CDX76538 | Canola | plasma membrane | 51.73 | 49.49 |
| CDX99493 | Canola | plasma membrane | 51.73 | 49.49 |
| CDX76536 | Canola | plasma membrane | 38.67 | 49.49 |
| CDX78835 | Canola | plasma membrane | 51.47 | 49.36 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 48.27 | 48.92 |
| KRH45390 | Soybean | plasma membrane | 41.07 | 48.12 |
| CDY12545 | Canola | plasma membrane | 37.33 | 46.98 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 36.8 | 46.15 |
| KRG98518 | Soybean | plasma membrane | 49.6 | 44.93 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 45.33 | 44.85 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 45.87 | 44.56 |
| KRH46353 | Soybean | plasma membrane | 48.8 | 44.1 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 17.6 | 43.71 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 45.6 | 43.62 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 45.33 | 43.04 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 27.2 | 40.96 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 41.07 | 39.79 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 41.33 | 39.54 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 46.4 | 39.46 |
| CDY54350 | Canola | plasma membrane | 34.4 | 38.86 |
| CDX75141 | Canola | plasma membrane | 33.6 | 37.95 |
| CDY14989 | Canola | plasma membrane | 41.33 | 37.35 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 37.07 | 37.07 |
| CDX71327 | Canola | plasma membrane | 41.07 | 37.02 |
| Solyc02g071100.2.1 | Tomato | nucleus | 36.8 | 36.8 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 36.27 | 36.07 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 23.47 | 35.92 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 45.6 | 35.55 |
| PGSC0003DMT400035010 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 34.67 | 34.3 |
| CDY15687 | Canola | plasma membrane | 27.47 | 33.99 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 35.2 | 33.59 |
| CDX99494 | Canola | plasma membrane | 45.33 | 33.14 |
| CDX94594 | Canola | extracellular, plasma membrane | 30.67 | 32.95 |
| CDX94595 | Canola | plasma membrane | 30.67 | 32.95 |
| CDX90136 | Canola | plasma membrane | 29.07 | 30.97 |
| CDY35722 | Canola | plasma membrane | 28.53 | 30.23 |
| CDY17197 | Canola | extracellular, plasma membrane | 28.0 | 29.91 |
| CDY27947 | Canola | plasma membrane | 27.73 | 29.8 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 33.07 | 29.52 |
| CDY12422 | Canola | plasma membrane | 28.8 | 28.72 |
| CDY29741 | Canola | plasma membrane | 28.53 | 28.38 |
| CDY16284 | Canola | plasma membrane | 28.53 | 28.38 |
| CDY72169 | Canola | plasma membrane | 18.67 | 27.67 |
| CDY29404 | Canola | plasma membrane | 27.73 | 27.3 |
| CDY39353 | Canola | plasma membrane | 27.73 | 27.23 |
| CDX90135 | Canola | plasma membrane | 22.93 | 26.63 |
| CDY35721 | Canola | plasma membrane | 22.13 | 26.02 |
| CDY46618 | Canola | plasma membrane | 15.47 | 25.55 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 25.6 | 25.33 |
| CDY29403 | Canola | plasma membrane | 25.87 | 25.19 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 25.33 | 25.07 |
| CDY02338 | Canola | plasma membrane | 21.33 | 25.0 |
| CDY39352 | Canola | plasma membrane | 25.87 | 24.87 |
| CDY22619 | Canola | plasma membrane | 24.8 | 24.67 |
| CDY67986 | Canola | plasma membrane | 24.53 | 24.66 |
| CDY64442 | Canola | plasma membrane | 25.6 | 24.55 |
| CDY53149 | Canola | plasma membrane | 25.6 | 24.43 |
| CDY29401 | Canola | plasma membrane | 22.4 | 24.42 |
| CDY09527 | Canola | plasma membrane | 20.8 | 24.38 |
| CDY09533 | Canola | plasma membrane | 20.8 | 24.38 |
| CDX94937 | Canola | plasma membrane | 24.27 | 24.01 |
| CDX93469 | Canola | plasma membrane | 24.27 | 23.58 |
| CDX96651 | Canola | plasma membrane | 26.4 | 23.4 |
| CDY63252 | Canola | extracellular | 26.4 | 22.92 |
| CDY31805 | Canola | plasma membrane | 25.87 | 21.9 |
| CDX73177 | Canola | plasma membrane | 20.53 | 18.2 |
| CDY63702 | Canola | plasma membrane | 26.4 | 12.91 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.27 | 0.64 |
Protein Annotations
| MapMan:24.2.1.6 | GO:A0A078DPK5 | EnsemblPlants:CDX90414 | ProteinID:CDX90414 | ProteinID:CDX90414.1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 |
| EnsemblPlantsGene:GSBRNA2T00151018001 | PFAM:PF16913 | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF17 | InterPro:PUP_plant | TMHMM:TMhelix |
| UniParc:UPI0004EEBED9 | SEG:seg | : | : | : | : |
Description
BnaA03g43670D
Coordinates
chrLK031863:-:33998..35471
Molecular Weight (calculated)
41781.8 Da
IEP (calculated)
6.118
GRAVY (calculated)
0.526
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MDRSQELYAN GDQNLEANLI EATSSEPQTK NYKRWIRLSI YVFFVLFFQP LATILGRLYY ENGGESTYVV TLLPLIGFPV LILFNFFSQL RQQPKSADTN
101: VNHSPSFTTL ASVYLCTGLI LSAYAYLYAI GLLYLPVSTF SLILASQLAF TAFFSYFLNS QKFTPFIVNS LFLLTVSSAL LVVDTESQDT TNVSRVQYVI
201: GFICTLGASA GIGLLLSLIQ LLFRKVFKEH TSSVVMDLTI YQSLVASCVV LIGLFASGEW RTLPSEMRNY KLGQVSYVVT LVSAAISWQV YTVGLVGLIF
301: ESSSVFSNSI TAVGLPIVPV IAVIVFHDKM EASKIFSIVL AIWGFLSFVY QHYLDEKKLK TCNTDPVEND GTQTW
101: VNHSPSFTTL ASVYLCTGLI LSAYAYLYAI GLLYLPVSTF SLILASQLAF TAFFSYFLNS QKFTPFIVNS LFLLTVSSAL LVVDTESQDT TNVSRVQYVI
201: GFICTLGASA GIGLLLSLIQ LLFRKVFKEH TSSVVMDLTI YQSLVASCVV LIGLFASGEW RTLPSEMRNY KLGQVSYVVT LVSAAISWQV YTVGLVGLIF
301: ESSSVFSNSI TAVGLPIVPV IAVIVFHDKM EASKIFSIVL AIWGFLSFVY QHYLDEKKLK TCNTDPVEND GTQTW
001: MGISQVHYCN GDQNLEANLL DHEETESFSV PQTKNCKRWL RVSIYAIFVI FCQPLATVLG RLYYENGGKS TYVVTLLQLI GFPVLILFRF FSRIRQPKST
101: DTNFSQSPSF TTLASVYLCT GLLVSAYAYL SAVGLLYLPV STFSLILASQ LAFTAFFSYF LNSQKFTPLI VNSLFLLTVS SALLVVNTDS ENTTNVSRVQ
201: YVIGFICTIG ASAGIGLVLS LIQLLFRKVF TKHTSSAVLD LANYQSLVAT CVVLIGLFAS GEWRTLPSEM RNYKLGKVSY ILTLASAAIF WQVYTVGCVG
301: LIFESSSVFS NSITAVGLPI VPVVAVIVFH DKMDASKIFS IILAIWGFLS FVYQHYLDEK KLKTCQTKPV EEETQTL
101: DTNFSQSPSF TTLASVYLCT GLLVSAYAYL SAVGLLYLPV STFSLILASQ LAFTAFFSYF LNSQKFTPLI VNSLFLLTVS SALLVVNTDS ENTTNVSRVQ
201: YVIGFICTIG ASAGIGLVLS LIQLLFRKVF TKHTSSAVLD LANYQSLVAT CVVLIGLFAS GEWRTLPSEM RNYKLGKVSY ILTLASAAIF WQVYTVGCVG
301: LIFESSSVFS NSITAVGLPI VPVVAVIVFH DKMDASKIFS IILAIWGFLS FVYQHYLDEK KLKTCQTKPV EEETQTL
Arabidopsis Description
PUP22Probable purine permease 22 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY74]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.