Subcellular Localization
min:
: max
Winner_takes_all: extracellular, endoplasmic reticulum, plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- endoplasmic reticulum 2
- extracellular 2
- golgi 1
- plasma membrane 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc06g074170.2.1 | |
| Solyc11g065020.1.1 | |
| Solyc11g068750.1.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18205.1 | Solyc06g074170.2.1 | AT5G22290.1 | 21798944 |
| AT4G18205.1 | Solyc11g068750.1.1 | AT5G22290.1 | 21798944 |
| AT4G18220.1 | Solyc11g065020.1.1 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 32.65 | 52.98 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 46.12 | 29.82 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 43.67 | 28.92 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 27.76 | 27.31 |
| KRH45390 | Soybean | plasma membrane | 35.1 | 26.88 |
| CDY08900 | Canola | plasma membrane | 33.47 | 26.37 |
| Solyc01g088550.2.1 | Tomato | plasma membrane | 36.73 | 24.73 |
| AT4G18210.1 | Thale cress | plasma membrane | 39.18 | 24.62 |
| CDX99493 | Canola | plasma membrane | 39.18 | 24.49 |
| Bra013292.1-P | Field mustard | plasma membrane | 38.78 | 24.36 |
| CDX76537 | Canola | plasma membrane | 38.37 | 24.1 |
| KRH46353 | Soybean | plasma membrane | 40.82 | 24.1 |
| Bra040924.1-P | Field mustard | plasma membrane | 38.37 | 24.04 |
| CDX78835 | Canola | plasma membrane | 38.37 | 24.04 |
| CDY08897 | Canola | plasma membrane | 38.37 | 24.04 |
| Bra021018.1-P | Field mustard | plasma membrane | 38.37 | 23.62 |
| AT4G18220.1 | Thale cress | plasma membrane | 37.55 | 23.59 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 37.55 | 23.59 |
| CDX76538 | Canola | plasma membrane | 37.55 | 23.47 |
| CDX90414 | Canola | plasma membrane | 35.92 | 23.47 |
| KRG98518 | Soybean | plasma membrane | 39.18 | 23.19 |
| Solyc08g077380.2.1 | Tomato | peroxisome, plasma membrane, vacuole | 35.51 | 23.08 |
| CDY01525 | Canola | plasma membrane | 35.1 | 22.75 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 40.82 | 22.68 |
| AT4G18205.1 | Thale cress | plasma membrane | 34.69 | 22.55 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 36.33 | 22.53 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 35.51 | 22.48 |
| CDX76536 | Canola | plasma membrane | 25.71 | 21.5 |
| Bra013291.1-P | Field mustard | plasma membrane | 31.84 | 21.08 |
| AT4G18195.1 | Thale cress | plasma membrane | 33.88 | 21.07 |
| AT4G18197.1 | Thale cress | plasma membrane | 33.47 | 21.03 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 31.43 | 20.53 |
| Bra040925.1-P | Field mustard | plasma membrane | 32.65 | 20.51 |
| CDY08895 | Canola | plasma membrane | 32.65 | 20.25 |
| CDX76540 | Canola | plasma membrane | 32.65 | 20.15 |
| Solyc08g077370.2.1 | Tomato | plasma membrane | 26.94 | 19.76 |
| Solyc02g071100.2.1 | Tomato | nucleus | 29.8 | 19.47 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 31.43 | 18.33 |
| Solyc12g087880.1.1 | Tomato | extracellular, plasma membrane, vacuole | 10.61 | 15.29 |
| Solyc04g074880.2.1 | Tomato | plasma membrane | 22.04 | 15.21 |
| Solyc12g087870.1.1 | Tomato | plasma membrane | 22.04 | 15.17 |
| Solyc07g008440.2.1 | Tomato | plasma membrane | 22.45 | 14.99 |
| Solyc04g074870.2.1 | Tomato | extracellular, plasma membrane | 20.41 | 14.12 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 20.41 | 14.01 |
| Solyc06g035420.1.1 | Tomato | extracellular, plasma membrane | 18.78 | 13.98 |
| Solyc12g057090.1.1 | Tomato | plasma membrane | 16.33 | 13.47 |
| Solyc12g057100.1.1 | Tomato | cytosol, golgi, plasma membrane | 19.18 | 12.98 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 20.0 | 12.83 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 20.82 | 12.81 |
| Solyc07g005660.2.1 | Tomato | plasma membrane | 17.14 | 12.8 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 20.41 | 12.17 |
Protein Annotations
| EnsemblPlants:Solyc03g005810.2.1 | EnsemblPlantsGene:Solyc03g005810.2 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | ncoils:Coil | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF17 | PFAM:PF16913 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000276760A | UniProt:K4BE04 |
| MapMan:24.2.1.6 | : | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:551254..552967
Molecular Weight (calculated)
28406.5 Da
IEP (calculated)
7.925
GRAVY (calculated)
0.295
Length
245 amino acids
Sequence
(BLAST)
(BLAST)
001: MVIASQLQFH VPGGNCMFYS IGQFYLPITT YTLICTAQFG FNAFFFFLFE QTRNHFFYSK LFSTSHSIFF TPLLQKNDTS INNKHSKRNS IAGFLCTLAA
101: SAGYGLMLSI TRLSFEKIFK RESLRLIIEM TIYESLVASL TNLVVIFASG ESRNLRQEMN DFLAIFHSWF NWIDFQGVFI VLQCDWHSWC ANGTIFSVLF
201: LHEKMSGVKV ISMFLAMWVF LSYMNQHYLD DLENKAEKSL VREVS
101: SAGYGLMLSI TRLSFEKIFK RESLRLIIEM TIYESLVASL TNLVVIFASG ESRNLRQEMN DFLAIFHSWF NWIDFQGVFI VLQCDWHSWC ANGTIFSVLF
201: LHEKMSGVKV ISMFLAMWVF LSYMNQHYLD DLENKAEKSL VREVS
001: MTADQELQII VRQGKEPNPT VQDERNSVSS SQAEVSHSNT YKRWLRVTLY TFFVISGQTV ATILGRVYYD NGGNSKWLAT VVQLVGFPVL LPYYILSFKT
101: HATTDRDGKR TSPRNRVLVY VVLGLLVGAD CYLYSIGLLY LPVSTYSLIC ASQLAFNAFF SYFLNSQKLT PIILNSLFLL TISSTLLAFN NEETDSTKVT
201: KGEYVKGFIC TVAASAGYGL VLSLQQLAFL KVLKKQNFSE VMDMIIYVSL VASCVSVVGL FASSEWKTLS SEMDNYKHGK VSYIMNLVWT AVTWQVFSIG
301: GTGLIFELSS LFSNAISVLG LPVVPILAVI IFHDKMNGLK VISMILAIWG FTSYVYQQYL DDKNLKKNHE ITTTESPDPP EAEESTWQSK
101: HATTDRDGKR TSPRNRVLVY VVLGLLVGAD CYLYSIGLLY LPVSTYSLIC ASQLAFNAFF SYFLNSQKLT PIILNSLFLL TISSTLLAFN NEETDSTKVT
201: KGEYVKGFIC TVAASAGYGL VLSLQQLAFL KVLKKQNFSE VMDMIIYVSL VASCVSVVGL FASSEWKTLS SEMDNYKHGK VSYIMNLVWT AVTWQVFSIG
301: GTGLIFELSS LFSNAISVLG LPVVPILAVI IFHDKMNGLK VISMILAIWG FTSYVYQQYL DDKNLKKNHE ITTTESPDPP EAEESTWQSK
Arabidopsis Description
PUP10Probable purine permease 10 [Source:UniProtKB/Swiss-Prot;Acc:O49725]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.