Skip to main content
crop-pal logo
Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, vacuole, plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 2
  • plastid 1
  • mitochondrion 1
  • vacuole 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400004651 Potato cytosol, nucleus, plasma membrane 83.82 95.18
Solyc08g077370.2.1 Tomato plasma membrane 64.99 73.35
VIT_02s0012g00730.t01 Wine grape plasma membrane 57.82 56.04
KRH04294 Soybean plasma membrane 54.38 52.56
KRH57573 Soybean plasma membrane 44.56 46.15
Solyc01g088550.2.1 Tomato plasma membrane 44.3 45.88
KRH57570 Soybean plasma membrane 47.21 45.64
KRH04293 Soybean plasma membrane 42.97 45.25
Solyc02g071110.2.1 Tomato plasma membrane 42.97 42.74
Solyc02g071080.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid, vacuole 27.06 40.96
Solyc02g071060.2.1 Tomato plasma membrane 41.11 39.24
Solyc02g071090.2.1 Tomato plasma membrane 37.93 38.13
Solyc02g071100.2.1 Tomato nucleus 37.93 38.13
Solyc02g071050.2.1 Tomato plasma membrane 36.87 35.92
Solyc03g005810.2.1 Tomato endoplasmic reticulum, extracellular, plastid 23.08 35.51
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 28.65 30.51
Solyc12g057090.1.1 Tomato plasma membrane 23.87 30.3
Solyc07g008440.2.1 Tomato plasma membrane 29.44 30.25
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 26.26 30.09
Solyc12g087870.1.1 Tomato plasma membrane 28.12 29.78
Solyc03g005820.2.1 Tomato plasma membrane 32.36 29.05
Solyc12g057100.1.1 Tomato cytosol, golgi, plasma membrane 27.32 28.45
Solyc10g005150.1.1 Tomato plasma membrane 27.59 27.23
Solyc10g005160.1.1 Tomato plasma membrane 25.73 27.17
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 12.2 27.06
Solyc04g074880.2.1 Tomato plasma membrane 25.2 26.76
Solyc07g005660.2.1 Tomato plasma membrane 22.81 26.22
Solyc10g005170.1.1 Tomato cytosol, peroxisome, plasma membrane 27.59 26.13
Solyc02g082170.1.1 Tomato plasma membrane 27.06 24.82
Protein Annotations
EnsemblPlants:Solyc08g077380.2.1EnsemblPlantsGene:Solyc08g077380.2GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF16
PFAM:PF16913SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI000276C2B2UniProt:K4CN98
MapMan:24.2.1.6:::::
Description
No Description!
Coordinates
chr8:-:61256237..61258301
Molecular Weight (calculated)
41573.8 Da
IEP (calculated)
6.509
GRAVY (calculated)
0.457
Length
377 amino acids
Sequence
(BLAST)
001: MAQSTPQVEL PIPESNRQIT EDETNEKKKI GKKSNLNYGW WCRIFIYIIC LIGGQCAATL LGRFYYDKGG NSKWMAAFVQ SSGFPILIPL FFFFKSPKKT
101: DSSPLEKPSK FTLSMIYIAF GLLLAGDNLL YSYGMLFLPV STFSLISASQ LPFNALFSLV LNAQKFTALI LNSVVVVTIS AALLAVNSES ETSEQFSAGK
201: YVIGFICTVA ASSAYALYLS LLELTFKKVT KSESFDTVVK MLFYPSLVAS CCCVVGLYVS GEMSILTAEM NGFSKGEISY LMTLIWTAIL WTIGWVGMMG
301: LISEVSSLFS NVIGTLGLPT VPVLAVFFFH DKMDGVKIIS LVLAVWGFLS YVYQNYLDDT KDKSTKSEDI EATTTTH
Best Arabidopsis Sequence Match ( AT4G18220.1 )
(BLAST)
001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK
Arabidopsis Description
PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.