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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular

Predictor Summary:
  • plastid 3
  • extracellular 5
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 6
  • golgi 4
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:plasma membrane, plastid
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400071864 Potato plasma membrane 92.71 89.44
Solyc07g008440.2.1 Tomato plasma membrane 69.6 62.4
VIT_18s0001g06950.t01 Wine grape plasma membrane 61.4 57.88
VIT_18s0001g06910.t01 Wine grape plasma membrane 60.79 56.98
KRH72416 Soybean endoplasmic reticulum, plasma membrane 57.75 55.23
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 58.05 54.42
Solyc12g087870.1.1 Tomato plasma membrane 58.66 54.21
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 57.14 52.66
AT1G28220.1 Thale cress plasma membrane 55.62 52.14
CDY35722 Canola plasma membrane 54.71 50.85
KRH52994 Soybean cytosol, nucleus, plasma membrane 53.19 50.72
CDX94595 Canola plasma membrane 53.8 50.72
Bra010890.1-P Field mustard plasma membrane 54.1 50.57
CDX90136 Canola plasma membrane 54.1 50.57
CDX94594 Canola extracellular, plasma membrane 53.5 50.43
Bra030078.1-P Field mustard extracellular, plasma membrane 53.5 50.43
AT1G28230.1 Thale cress plasma membrane 54.41 50.28
CDY17197 Canola extracellular, plasma membrane 53.5 50.14
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 25.84 50.0
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 53.8 50.0
CDY27947 Canola plasma membrane 52.89 49.86
Bra005474.1-P Field mustard extracellular, plasma membrane 52.89 49.57
Solyc04g074880.2.1 Tomato plasma membrane 52.28 48.45
CDY12422 Canola plasma membrane 55.32 48.4
Bra036866.1-P Field mustard plasma membrane 55.32 48.4
Bra010891.1-P Field mustard plasma membrane 51.98 48.03
CDY29741 Canola plasma membrane 55.02 48.01
AT2G33750.1 Thale cress plasma membrane 51.98 47.77
CDY16284 Canola plasma membrane 54.71 47.75
CDY15687 Canola plasma membrane 43.16 46.86
CDX90135 Canola plasma membrane 45.9 46.75
CDY35721 Canola plasma membrane 42.86 44.2
CDY72169 Canola plasma membrane 33.74 43.87
CDY46618 Canola plasma membrane 29.79 43.17
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 43.47 42.43
HORVU5Hr1G069880.1 Barley plasma membrane 34.65 42.22
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 14.89 41.18
TraesCS5A01G247600.1 Wheat plasma membrane 47.11 41.11
TraesCS5B01G244800.1 Wheat plasma membrane 47.11 41.11
TraesCS5D01G254100.1 Wheat plasma membrane 46.81 40.85
TraesCS2B01G617100.1 Wheat plasma membrane 44.68 40.5
TraesCS5A01G429100.1 Wheat plasma membrane 46.2 39.48
TraesCS5B01G431200.2 Wheat plasma membrane 45.9 39.22
TraesCS5D01G437200.1 Wheat plasma membrane 45.9 39.12
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 46.2 38.97
KXG35809 Sorghum plasma membrane 45.59 38.56
TraesCS5A01G247700.1 Wheat plasma membrane 43.77 38.1
TraesCS5B01G245000.1 Wheat plasma membrane 31.91 37.77
Solyc12g057090.1.1 Tomato plasma membrane 33.13 36.7
Solyc12g057100.1.1 Tomato cytosol, golgi, plasma membrane 40.12 36.46
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 46.2 36.45
TraesCS5B01G244900.1 Wheat plasma membrane 41.34 35.88
TraesCS5D01G254200.2 Wheat plasma membrane 44.38 35.61
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 44.38 33.87
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 34.04 32.18
Solyc10g005160.1.1 Tomato plasma membrane 31.31 28.85
Solyc10g005150.1.1 Tomato plasma membrane 32.83 28.27
Solyc07g005660.2.1 Tomato plasma membrane 27.66 27.74
Solyc02g071080.1.1 Tomato endoplasmic reticulum, plasma membrane, plastid, vacuole 20.67 27.31
Solyc10g005170.1.1 Tomato cytosol, peroxisome, plasma membrane 32.22 26.63
Solyc08g077380.2.1 Tomato peroxisome, plasma membrane, vacuole 30.09 26.26
Solyc02g082170.1.1 Tomato plasma membrane 32.52 26.03
Solyc01g088550.2.1 Tomato plasma membrane 28.57 25.82
Solyc02g071110.2.1 Tomato plasma membrane 29.18 25.33
Solyc08g077370.2.1 Tomato plasma membrane 25.23 24.85
Solyc02g071100.2.1 Tomato nucleus 27.36 24.0
Solyc02g071050.2.1 Tomato plasma membrane 26.44 22.48
HORVU7Hr1G086680.1 Barley mitochondrion 13.07 22.4
Solyc02g071090.2.1 Tomato plasma membrane 25.23 22.13
Solyc02g071060.2.1 Tomato plasma membrane 26.14 21.77
Solyc03g005820.2.1 Tomato plasma membrane 25.53 20.0
Solyc03g005810.2.1 Tomato endoplasmic reticulum, extracellular, plastid 13.98 18.78
Protein Annotations
EnsemblPlants:Solyc06g035420.1.1EnsemblPlantsGene:Solyc06g035420.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021InterPro:PUP_plantPANTHER:PTHR31376PANTHER:PTHR31376:SF1
PFAM:PF16913SEG:segSUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0002765B61UniProt:K4C4R4
MapMan:24.2.1.6:::::
Description
No Description!
Coordinates
chr6:-:24304430..24306406
Molecular Weight (calculated)
36690.4 Da
IEP (calculated)
9.510
GRAVY (calculated)
0.646
Length
329 amino acids
Sequence
(BLAST)
001: MKKVLLVINC IILAVGTCGG PLIMRLYFIK GGKRIWLSSW LQTAAWPINF IPLVISYFYR RKNNNNNSSK LILMTPRVFM ATIGIGILQG FTNYFYAYGV
101: AKLPVSTSGL LFATQLAFTA FFAFLIVKLK FTPYSVNSVF LLTIGAVVLA LRFGMTLASA ALTGLIFPLV ELIYKKAQQT ITYTFVLEFQ TLYCFVATVL
201: ATIGMIINED FQAISREVKT FELGEDKYYI VIIWSAIILQ FYFLGSIGVI YSASSLVSGI LISVLLPITE VLAVFLYGEK FNAEKGVSLA LSLWGFASYF
301: YGDYRGNNNT ENNNQSPTTE MIDKTNCTP
Best Arabidopsis Sequence Match ( AT1G28220.1 )
(BLAST)
001: MVKALVIINC IILAIGNCGG PLIMRLYFNN GGKRIWFSTF LETAGFPVIF IPLLFSYITR RRSNNVGDST SFFLIKPRLL IAAVIVGILS GFDNYLYAYG
101: IAYLPVSTAA LIIASQLAFI AIFSFFMVKH KFTPFTINAV VLLTVGAAVL GMHTETDKPV HETHKQYITG FLITVAAAVM YAFILPLVEL AYQKAKQTMS
201: YTLVLEFQLI LCLLASIVSV IGMFIAGDFK ALPKEAREFK LGEALFYVVA VFSAIIWQGF FLGAIGLIFS TSSLVSGIMI SVLLPITEVL AVIFYHEKFQ
301: AEKGLSLALS LWGFVSYFYG EIKSGEDKRR IQQEESQETE QSSLSRPISE C
Arabidopsis Description
PUP3Purine permease 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ95]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.