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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • extracellular 4
  • golgi 4
  • plasma membrane 6
  • endoplasmic reticulum 5
  • vacuole 4
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17197 Canola extracellular, plasma membrane 94.56 94.02
CDY12422 Canola plasma membrane 82.81 76.86
CDY16284 Canola plasma membrane 82.52 76.39
CDY29741 Canola plasma membrane 82.52 76.39
AT2G33750.1 Thale cress plasma membrane 70.2 68.44
CDY35722 Canola plasma membrane 68.19 67.23
CDX90136 Canola plasma membrane 67.62 67.05
CDX94594 Canola extracellular, plasma membrane 63.9 63.9
CDX94595 Canola plasma membrane 63.61 63.61
CDY46618 Canola plasma membrane 40.69 62.56
CDY15687 Canola plasma membrane 53.01 61.06
CDX90135 Canola plasma membrane 55.01 59.44
VIT_18s0001g06950.t01 Wine grape plasma membrane 58.17 58.17
VIT_18s0001g06910.t01 Wine grape plasma membrane 58.17 57.83
CDY72169 Canola plasma membrane 41.83 57.71
CDY35721 Canola plasma membrane 52.44 57.37
KRH72416 Soybean endoplasmic reticulum, plasma membrane 56.45 57.27
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 55.87 55.56
PGSC0003DMT400054207 Potato plasma membrane 28.08 55.37
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 55.59 54.34
PGSC0003DMT400071864 Potato plasma membrane 52.44 53.67
PGSC0003DMT400036604 Potato extracellular, plasma membrane 52.72 53.64
KRH52994 Soybean cytosol, nucleus, plasma membrane 53.01 53.62
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 49.86 52.89
Solyc07g008440.2.1 Tomato plasma membrane 54.73 52.04
PGSC0003DMT400072048 Potato extracellular, plasma membrane 39.83 51.1
Solyc12g087870.1.1 Tomato plasma membrane 51.58 50.56
HORVU5Hr1G069880.1 Barley plasma membrane 38.97 50.37
PGSC0003DMT400005470 Potato extracellular, plasma membrane 49.86 49.15
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 46.99 48.66
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 48.71 48.02
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 22.92 47.06
KXG35809 Sorghum plasma membrane 50.14 44.99
TraesCS5A01G247600.1 Wheat plasma membrane 48.42 44.83
TraesCS5D01G254100.1 Wheat plasma membrane 48.42 44.83
TraesCS5B01G244800.1 Wheat plasma membrane 48.14 44.56
Solyc04g074880.2.1 Tomato plasma membrane 45.27 44.51
TraesCS2B01G617100.1 Wheat plasma membrane 45.85 44.08
PGSC0003DMT400039797 Potato mitochondrion 22.06 44.0
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 49.0 43.85
PGSC0003DMT400005467 Potato plasma membrane 44.13 43.75
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 14.9 43.7
TraesCS5B01G431200.2 Wheat plasma membrane 47.28 42.86
TraesCS5A01G429100.1 Wheat plasma membrane 47.28 42.86
TraesCS5B01G245000.1 Wheat plasma membrane 34.1 42.81
TraesCS5D01G437200.1 Wheat plasma membrane 47.28 42.75
PGSC0003DMT400085139 Potato mitochondrion 44.7 40.31
TraesCS5A01G247700.1 Wheat plasma membrane 43.55 40.21
TraesCS5B01G244900.1 Wheat plasma membrane 42.12 38.79
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 45.56 38.13
TraesCS5D01G254200.2 Wheat plasma membrane 44.41 37.8
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 44.41 35.96
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 35.53 35.63
CDY12545 Canola plasma membrane 29.23 34.23
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 29.23 34.11
CDY08900 Canola plasma membrane 27.51 30.87
CDY02338 Canola plasma membrane 27.51 30.0
CDY09533 Canola plasma membrane 27.51 30.0
CDY09527 Canola plasma membrane 27.22 29.69
HORVU7Hr1G086680.1 Barley mitochondrion 16.33 29.69
CDY34789 Canola cytosol, peroxisome, plasma membrane 31.81 29.29
CDX76826 Canola cytosol, peroxisome, plasma membrane 31.52 29.02
CDX76537 Canola plasma membrane 32.38 28.97
CDY08899 Canola cytosol, peroxisome, plasma membrane 32.09 28.72
CDY14989 Canola plasma membrane 33.81 28.43
CDX78835 Canola plasma membrane 31.81 28.39
CDY08897 Canola plasma membrane 31.81 28.39
CDX71327 Canola plasma membrane 33.81 28.37
CDX76538 Canola plasma membrane 31.52 28.06
CDX99493 Canola plasma membrane 31.52 28.06
CDX90414 Canola plasma membrane 29.8 27.73
CDY01525 Canola plasma membrane 29.8 27.51
CDX76536 Canola plasma membrane 22.92 27.3
CDY08895 Canola plasma membrane 30.37 26.84
CDX76540 Canola plasma membrane 30.09 26.45
CDY54350 Canola plasma membrane 23.21 24.4
CDX75141 Canola plasma membrane 22.35 23.49
CDX78833 Canola cytosol, extracellular, plasma membrane 31.81 23.08
CDX99494 Canola plasma membrane 31.23 21.25
CDY39353 Canola plasma membrane 22.35 20.42
CDY29404 Canola plasma membrane 22.06 20.21
CDX93469 Canola plasma membrane 22.35 20.21
CDY22619 Canola plasma membrane 21.49 19.89
CDY29403 Canola plasma membrane 21.78 19.74
CDX94937 Canola plasma membrane 21.2 19.53
CDY39352 Canola plasma membrane 21.78 19.49
CDY53149 Canola plasma membrane 21.78 19.34
CDX96651 Canola plasma membrane 23.21 19.15
CDY64442 Canola plasma membrane 20.92 18.67
CDY29401 Canola plasma membrane 18.34 18.6
CDY67986 Canola plasma membrane 19.77 18.5
CDY63252 Canola extracellular 21.49 17.36
CDY31805 Canola plasma membrane 21.49 16.93
CDX73177 Canola plasma membrane 18.62 15.37
CDY63702 Canola plasma membrane 22.35 10.17
CDX96650 Canola cytosol, plasma membrane, vacuole 0.29 0.64
Protein Annotations
MapMan:24.2.1.6GO:A0A078GS22UniProt:A0A078GS22EnsemblPlants:CDY27947ProteinID:CDY27947ProteinID:CDY27947.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00038864001PFAM:PF16913PANTHER:PTHR31376PANTHER:PTHR31376:SF1InterPro:PUP_plant
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE0DACSEG:seg::
Description
BnaCnng05320DBnaCnng05320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GS22]
Coordinates
chrLK032212:+:470040..471159
Molecular Weight (calculated)
38840.5 Da
IEP (calculated)
9.412
GRAVY (calculated)
0.630
Length
349 amino acids
Sequence
(BLAST)
001: MKMKTVLVII NCIILAIGNC GGPLMTRLYF RNGGKRIWFS SFLQTSGCPI ILLPLLISFL TRHRKQEQED TKTTLFLIKP PLFLASVVFG LLIGFDNYLY
101: AYGLAYLPVS TSSLIISSQL AFTALFAFFM VKQRFTPFTI NAVVLLTLGA GSLALHADGD KLPKETRKEY IVGFAMTVAA AVLYAFVLPL VELTYKKASQ
201: RISYTLVLEM QLVLCVVATC FCLVGMLADG DFKELRREAR EFKLGGSKYY CVVVAFTAVI WQGFFLGSIG MIFCASSLVS GVLISTLLPL TEVLAVLFFR
301: EKFQAEKGVS LFLSLWGFVS YFYGKIQSEK EKRTQEAQLS QLQVTESVA
Best Arabidopsis Sequence Match ( AT2G33750.2 )
(BLAST)
001: MKMKTVLVII NCIFLAIGNC GGPLMMRLYF QNGGERIWFP SFLQTVGCPL IFFPLLLSFL RRRRCLEEQE TTPFFLMKPP LFIAAIVVGL LVGFDNYLYS
101: YGLAYIPVST ASLIISAQLG FTALFAFFMV KQKFTPFTIN AIVLLTGGAV VLALNSDSDK LANETHKEYV VGFIMTLGAA LLYGFILPLV ELSYKKSGQR
201: ITYTLALEFQ MVLCFAATCV CLVGMLAAGD FKVIAGEARD FKLGESLYYV VIVFTAIIWQ AFFVGAIGLI FCASSLVSGI MVSALLPVTV ILAVICFQEK
301: FQAGKGVALA LSLWGSVSYF YGQVKSEEKT KAQDTQLSQL PVTDYVA
Arabidopsis Description
PUP2Purine permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94GB1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.