CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
mitochondrion 2
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29401	Canola	plasma membrane	85.79	93.02
CDY29404	Canola	plasma membrane	68.36	66.93
CDY39353	Canola	plasma membrane	67.83	66.23
AT1G19770.1	Thale cress	plasma membrane	69.44	65.9
CDX96651	Canola	plasma membrane	68.36	60.28
CDY39352	Canola	plasma membrane	61.39	58.72
CDY29403	Canola	plasma membrane	60.59	58.7
CDX73177	Canola	plasma membrane	39.41	34.75
CDY63702	Canola	plasma membrane	68.9	33.51
CDY22619	Canola	plasma membrane	31.64	31.3
CDY53149	Canola	plasma membrane	32.71	31.04
CDX94937	Canola	plasma membrane	30.83	30.34
CDX93469	Canola	plasma membrane	30.83	29.79
CDY64442	Canola	plasma membrane	29.76	28.39
CDY12545	Canola	plasma membrane	22.25	27.85
CDY31805	Canola	plasma membrane	32.98	27.77
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	21.45	26.76
CDX75141	Canola	plasma membrane	23.32	26.2
CDY63252	Canola	extracellular	30.03	25.93
CDY08899	Canola	cytosol, peroxisome, plasma membrane	27.08	25.9
CDX76537	Canola	plasma membrane	27.08	25.9
CDY54350	Canola	plasma membrane	22.79	25.6
CDY08897	Canola	plasma membrane	26.81	25.58
CDX78835	Canola	plasma membrane	26.54	25.32
CDX99493	Canola	plasma membrane	26.54	25.26
CDX76538	Canola	plasma membrane	26.54	25.26
CDX76536	Canola	plasma membrane	19.57	24.91
CDX90414	Canola	plasma membrane	24.66	24.53
CDY08900	Canola	plasma membrane	20.11	24.12
CDY01525	Canola	plasma membrane	24.13	23.81
CDY08895	Canola	plasma membrane	24.66	23.29
CDX76540	Canola	plasma membrane	24.66	23.17
CDX90136	Canola	plasma membrane	21.45	22.73
CDY14989	Canola	plasma membrane	25.2	22.65
CDX71327	Canola	plasma membrane	24.93	22.36
CDY35722	Canola	plasma membrane	21.18	22.32
CDX94595	Canola	plasma membrane	19.57	20.92
CDX94594	Canola	extracellular, plasma membrane	19.57	20.92
CDX78833	Canola	cytosol, extracellular, plasma membrane	26.81	20.79
CDY15687	Canola	plasma membrane	16.62	20.46
CDX90135	Canola	plasma membrane	17.69	20.43
CDY46618	Canola	plasma membrane	12.06	19.82
CDY27947	Canola	plasma membrane	18.5	19.77
CDY72169	Canola	plasma membrane	13.4	19.76
CDY17197	Canola	extracellular, plasma membrane	18.5	19.66
CDY29741	Canola	plasma membrane	19.84	19.63
CDY12422	Canola	plasma membrane	19.57	19.41
CDY16284	Canola	plasma membrane	19.3	19.1
CDX99494	Canola	plasma membrane	26.01	18.91
CDY35721	Canola	plasma membrane	16.09	18.81
CDY09527	Canola	plasma membrane	16.09	18.75
CDY09533	Canola	plasma membrane	15.82	18.44
CDY02338	Canola	plasma membrane	15.82	18.44
CDY34789	Canola	cytosol, peroxisome, plasma membrane	18.23	17.94
CDX76826	Canola	cytosol, peroxisome, plasma membrane	17.96	17.68
CDX96650	Canola	cytosol, plasma membrane, vacuole	0.27	0.64

Protein Annotations

EnsemblPlants:CDY67986	EnsemblPlantsGene:GSBRNA2T00068381001	GO:A0A078JQP1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	InterPro:PUP_plant	PANTHER:PTHR31376
PANTHER:PTHR31376:SF34	PFAM:PF16913	ProteinID:CDY67986	ProteinID:CDY67986.1	SEG:seg	TMHMM:TMhelix
UniParc:UPI0004EE59DA	UniProt:A0A078JQP1	MapMan:24.2.1.6	:	:	:

Description

BnaCnng57190DBnaCnng57190D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JQP1]

Coordinates

chrLK036727:+:1149..2760

Molecular Weight (calculated)

41563.4 Da

IEP (calculated)

9.419

GRAVY (calculated)

0.317

Length

373 amino acids

Sequence
(BLAST)

001: MAKNHQPIQT KPQETFVRIP VYTKQDLIAL GNSNRKLNHW PTIILCIIFV ITGQSIANIL ENFYYDQIDH DDKYNHQNDG VWTQSLLQTV GFPLLLPFYI
101: FTAKKHNQQQ SPTTSDRTST KYIISFSGLI GILWSNQGRF SAKAKLELPF RVFTLIYTTQ LFFTLIFAAF INKIKLNRWI ITSLILATAT GALTFSSSFG
201: GEPDEAEANN GRGSLAALIS SLYFSLLLCV IQNVFKRTKA PSFASVYQVL IISSLVATIS SAAGLLIEGE QDDFKRDMNG FSKGKGAYVM AMVGQVVAWQ
301: VYWAGIVGLV FSVSSVLANV ISVITWPIVS VLVVIFFGYV NDEFDVFKGV ALVTASLSAA AYFYRLHKEN LSY

Best Arabidopsis Sequence Match ( AT1G75470.1 )
(BLAST)

001: MGHNQPMQSS NPQEHFVQIA LDIEHRLTTP ISLTSDSNQR RNQWVTIIIC TILAVTGQCI ARLLENYYFL HKNLSRRRGI LTQTLLQVVG FPILLLPFLL
101: HFLIKKQKQL LIFSGETSLK HLAITYSILC IYMFCQAFFS DVRNQIPYRV FTLTYTTQLL FTLIFSKYYN DIKFNRWTFI SLILAVLAGA FTLYTFSAGS
201: PIYGKKSYGY GIINVAFGAA IFFSLLLCII RKVFEELISF CNTSTNRKQP SFVVVLEMII FLSLVVTIIL VAAVLISGEH HDMKKEMETF TKGDIAYVRT
301: MVGQAVAWQI YWVGIVGLVF AVSAVFSNVI SVCTWPIVSL LVAFLYNTHD HFDVFRGIAL GAAALSVSCY IYIIHKEKSD DDDQSTS

Arabidopsis Description

PUP15Putative purine permease 15 [Source:UniProtKB/Swiss-Prot;Acc:Q9LQZ0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.