CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 4
extracellular 1
golgi 1
endoplasmic reticulum 1
vacuole 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plasma membrane, plastid
BaCelLo:	plastid
MultiLoc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra019981.1-P	Field mustard	plasma membrane	97.41	96.91
CDX94937	Canola	plasma membrane	93.78	95.51
CDY22619	Canola	plasma membrane	79.27	81.17
AT1G09860.1	Thale cress	plasma membrane	80.31	80.94
CDY53149	Canola	plasma membrane	60.88	59.8
CDY31805	Canola	plasma membrane	61.14	53.27
CDY64442	Canola	plasma membrane	43.01	42.46
CDY63252	Canola	extracellular	43.01	38.43
CDY29404	Canola	plasma membrane	33.68	34.12
CDY39353	Canola	plasma membrane	33.16	33.51
CDY12545	Canola	plasma membrane	25.39	32.89
CDY36342	Canola	endoplasmic reticulum, plasma membrane, vacuole	24.87	32.11
CDY29403	Canola	plasma membrane	31.87	31.95
CDY39352	Canola	plasma membrane	32.12	31.79
CDY29401	Canola	plasma membrane	28.24	31.69
CDY67986	Canola	plasma membrane	29.79	30.83
CDX96651	Canola	plasma membrane	33.68	30.73
CDX75141	Canola	plasma membrane	25.39	29.52
CDY54350	Canola	plasma membrane	25.39	29.52
CDY14989	Canola	plasma membrane	27.72	25.78
CDX71327	Canola	plasma membrane	27.46	25.48
CDX90414	Canola	plasma membrane	23.58	24.27
CDY01525	Canola	plasma membrane	23.32	23.81
CDX76537	Canola	plasma membrane	23.58	23.33
CDY08900	Canola	plasma membrane	18.65	23.15
CDY08899	Canola	cytosol, peroxisome, plasma membrane	23.32	23.08
CDX78835	Canola	plasma membrane	23.32	23.02
CDX76538	Canola	plasma membrane	23.32	22.96
CDY17197	Canola	extracellular, plasma membrane	20.73	22.79
CDX99493	Canola	plasma membrane	23.06	22.7
CDX73177	Canola	plasma membrane	24.61	22.46
CDY27947	Canola	plasma membrane	20.21	22.35
CDY29741	Canola	plasma membrane	21.76	22.28
CDY12422	Canola	plasma membrane	21.5	22.07
CDY08897	Canola	plasma membrane	22.28	21.99
CDX76536	Canola	plasma membrane	16.58	21.84
CDY08895	Canola	plasma membrane	22.02	21.52
CDY16284	Canola	plasma membrane	20.98	21.49
CDX90135	Canola	plasma membrane	17.88	21.36
CDX76540	Canola	plasma membrane	21.76	21.16
CDY46618	Canola	plasma membrane	12.44	21.15
CDX90136	Canola	plasma membrane	19.17	21.02
CDY35721	Canola	plasma membrane	17.36	21.0
CDX94594	Canola	extracellular, plasma membrane	18.91	20.92
CDY35722	Canola	plasma membrane	19.17	20.9
CDY15687	Canola	plasma membrane	16.32	20.79
CDX94595	Canola	plasma membrane	18.65	20.63
CDX78833	Canola	cytosol, extracellular, plasma membrane	25.65	20.58
CDX99494	Canola	plasma membrane	25.91	19.49
CDX76826	Canola	cytosol, peroxisome, plasma membrane	17.36	17.68
CDY09527	Canola	plasma membrane	14.51	17.5
CDY34789	Canola	cytosol, peroxisome, plasma membrane	17.1	17.41
CDY09533	Canola	plasma membrane	14.25	17.19
CDY02338	Canola	plasma membrane	14.25	17.19
CDY63702	Canola	plasma membrane	33.42	16.82
CDY72169	Canola	plasma membrane	10.88	16.6
CDX96650	Canola	cytosol, plasma membrane, vacuole	0.52	1.27

Protein Annotations

MapMan:24.2.1.6	GO:A0A078DYF9	EnsemblPlants:CDX93469	ProteinID:CDX93469	ProteinID:CDX93469.1	ncoils:Coil
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00156138001	PFAM:PF16913	PANTHER:PTHR31376	PANTHER:PTHR31376:SF34	InterPro:PUP_plant
TMHMM:TMhelix	UniParc:UPI0004EDBF6E	SEG:seg	:	:	:

Description

BnaA06g05790D

Coordinates

chrLK031876:+:338992..340152

Molecular Weight (calculated)

43896.7 Da

IEP (calculated)

9.011

GRAVY (calculated)

0.283

Length

386 amino acids

Sequence
(BLAST)

001: MEEFQGPEPG RHNTSEIRSL ELKQRKWWIS VFFCSFLILT GDSLVMLLLN FYYVQNNRSE NDQDQQYRGT WTQALLQNVA FPILIPLFFI LPKPEPVSDQ
101: TNTRHPPFLS VLLLYLSLGV LVSVYSKLYA LARLYVGWGI LVPAQLILTS LFSAFINRLK FNRWIIISII FTLAADFFCA PAFSGTPTED ESYTYGIKAW
201: LILIFPTLAF SLSLSLTQLG FEKVLAKTKR YGNNKKVFRM VLEMQIFVSF VATLICLVGM FASGEFKELK GDSERFKKGR TYYSLSLVGL ALSWQVWSVG
301: VLGLVLLVSG LFADVVHMCA SPVVSLLVVL AFDFKDDDGF GWQRRGALLG SVLALACYFY YLHKTKKKEM AELNKRENNN NNSEEA

Best Arabidopsis Sequence Match ( AT1G09860.1 )
(BLAST)

001: MEEFQGPEPR GQMMSENPRS LELNQRKWWI SVFICGFLIF AGDSLVMLLL NFFYVQDNRS ESDQDRQYKG TWTQALIQNA AFPILIPFFF ILSSPKPNPE
101: TVSNQTNNGW FRVLSLYVSL GVLVSVYSKL YALGKLYVGW GILLSTQLIL TSLFSAFINR LKFNRWIIIS IIFTLGADFF GGPAFAGTPN EDETDPYDIK
201: AWLILIFPTL AFSLSLCLMQ LGFDKVLVKT KRYGNKKVFR MVLEMQICVS FIATLICTVG LFASGEFKEL KGDSERFKKG KTYYILSLVG LALSWQVWAV
301: GLLGLVLLVS GLFADVVHMG ASPVVALLVV LAFDFMDDEF GWQRRGALLG AVLALASYFY SLHTKKKKEI AELNKRENNN SEA

Arabidopsis Description

PUP16Probable purine permease 16 [Source:UniProtKB/Swiss-Prot;Acc:O04508]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.