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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • golgi 1
  • mitochondrion 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:golgi, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:golgi
PProwler:mitochondrion
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra036866.1-P Field mustard plasma membrane 98.94 99.2
CDY12422 Canola plasma membrane 97.08 97.34
CDY16284 Canola plasma membrane 95.76 95.76
CDY27947 Canola plasma membrane 76.39 82.52
CDY17197 Canola extracellular, plasma membrane 75.86 81.48
AT2G33750.1 Thale cress plasma membrane 67.64 71.23
CDY35722 Canola plasma membrane 64.19 68.36
CDX90136 Canola plasma membrane 63.4 67.9
CDX94594 Canola extracellular, plasma membrane 61.27 66.19
CDX94595 Canola plasma membrane 61.01 65.9
CDY15687 Canola plasma membrane 50.93 63.37
CDY46618 Canola plasma membrane 37.93 63.0
CDX90135 Canola plasma membrane 52.52 61.3
VIT_18s0001g06950.t01 Wine grape plasma membrane 55.97 60.46
VIT_18s0001g06910.t01 Wine grape plasma membrane 55.7 59.83
CDY72169 Canola plasma membrane 40.05 59.68
KRH72416 Soybean endoplasmic reticulum, plasma membrane 53.32 58.43
VIT_18s0001g06940.t01 Wine grape endoplasmic reticulum, plasma membrane 54.38 58.4
CDY35721 Canola plasma membrane 49.34 58.31
PGSC0003DMT400036604 Potato extracellular, plasma membrane 50.66 55.69
KRH62277 Soybean cytosol, endoplasmic reticulum, plasma membrane 52.52 55.46
PGSC0003DMT400054207 Potato plasma membrane 25.99 55.37
KRH52994 Soybean cytosol, nucleus, plasma membrane 50.66 55.36
Solyc06g035420.1.1 Tomato extracellular, plasma membrane 48.01 55.02
PGSC0003DMT400071864 Potato plasma membrane 49.6 54.84
PGSC0003DMT400072048 Potato extracellular, plasma membrane 39.26 54.41
Solyc07g008440.2.1 Tomato plasma membrane 52.52 53.95
Solyc12g087870.1.1 Tomato plasma membrane 49.6 52.53
Solyc12g087880.1.1 Tomato extracellular, plasma membrane, vacuole 22.55 50.0
PGSC0003DMT400005470 Potato extracellular, plasma membrane 46.68 49.72
HORVU5Hr1G069880.1 Barley plasma membrane 35.01 48.89
Solyc04g074870.2.1 Tomato extracellular, plasma membrane 45.62 48.59
Zm00001d005933_P001 Maize golgi, plasma membrane, plastid 42.97 48.07
Solyc04g074880.2.1 Tomato plasma membrane 44.03 46.76
PGSC0003DMT400005467 Potato plasma membrane 43.24 46.31
TraesCS5A01G247600.1 Wheat plasma membrane 45.36 45.36
TraesCS5B01G244800.1 Wheat plasma membrane 45.09 45.09
TraesCS5D01G254100.1 Wheat plasma membrane 45.09 45.09
KXG35809 Sorghum plasma membrane 46.15 44.73
TraesCS5B01G431200.2 Wheat plasma membrane 45.62 44.68
TraesCS2B01G617100.1 Wheat plasma membrane 42.97 44.63
TraesCS5A01G429100.1 Wheat plasma membrane 45.09 44.16
Os09t0467300-02 Rice cytosol, endoplasmic reticulum, plasma membrane 45.62 44.1
TraesCS5D01G437200.1 Wheat plasma membrane 44.56 43.52
TraesCS5B01G245000.1 Wheat plasma membrane 31.83 43.17
HORVU2Hr1G127610.1 Barley cytosol, plasma membrane 13.53 42.86
PGSC0003DMT400039797 Potato mitochondrion 19.89 42.86
PGSC0003DMT400085139 Potato mitochondrion 43.5 42.38
TraesCS5A01G247700.1 Wheat plasma membrane 40.85 40.74
TraesCS5B01G244900.1 Wheat plasma membrane 39.79 39.58
HORVU5Hr1G104050.3 Barley cytosol, peroxisome, plasma membrane 43.5 39.33
TraesCS5D01G254200.2 Wheat plasma membrane 41.91 38.54
HORVU5Hr1G069960.1 Barley cytosol, plasma membrane 41.91 36.66
HORVU2Hr1G127530.7 Barley endoplasmic reticulum, plasma membrane 33.16 35.92
CDY36342 Canola endoplasmic reticulum, plasma membrane, vacuole 27.06 34.11
CDY12545 Canola plasma membrane 26.26 33.22
CDY09533 Canola plasma membrane 27.32 32.19
CDY02338 Canola plasma membrane 27.06 31.88
CDY09527 Canola plasma membrane 27.06 31.88
CDY08900 Canola plasma membrane 24.67 29.9
CDY34789 Canola cytosol, peroxisome, plasma membrane 29.97 29.82
CDX78835 Canola plasma membrane 30.77 29.67
CDX76826 Canola cytosol, peroxisome, plasma membrane 29.71 29.55
CDY08897 Canola plasma membrane 30.24 29.16
CDX76537 Canola plasma membrane 29.97 28.97
CDX99493 Canola plasma membrane 29.97 28.83
CDY08899 Canola cytosol, peroxisome, plasma membrane 29.71 28.72
HORVU7Hr1G086680.1 Barley mitochondrion 14.59 28.65
CDX90414 Canola plasma membrane 28.38 28.53
CDX76538 Canola plasma membrane 29.44 28.32
CDY01525 Canola plasma membrane 28.38 28.31
CDY14989 Canola plasma membrane 30.5 27.71
CDX71327 Canola plasma membrane 30.5 27.64
CDX76536 Canola plasma membrane 20.95 26.96
CDY08895 Canola plasma membrane 28.12 26.84
CDX76540 Canola plasma membrane 28.12 26.7
CDY54350 Canola plasma membrane 21.22 24.1
CDX75141 Canola plasma membrane 20.69 23.49
CDX78833 Canola cytosol, extracellular, plasma membrane 29.97 23.49
CDY22619 Canola plasma membrane 22.28 22.28
CDX99494 Canola plasma membrane 29.97 22.03
CDX93469 Canola plasma membrane 22.28 21.76
CDX94937 Canola plasma membrane 21.49 21.37
CDY64442 Canola plasma membrane 21.49 20.72
CDY39353 Canola plasma membrane 20.95 20.68
CDY53149 Canola plasma membrane 21.49 20.61
CDY29404 Canola plasma membrane 20.69 20.47
CDY29403 Canola plasma membrane 20.69 20.26
CDY39352 Canola plasma membrane 20.69 20.0
CDY67986 Canola plasma membrane 19.63 19.84
CDY29401 Canola plasma membrane 18.04 19.77
CDY63252 Canola extracellular 21.49 18.75
CDX96651 Canola plasma membrane 20.95 18.68
CDY31805 Canola plasma membrane 20.95 17.83
CDX73177 Canola plasma membrane 17.77 15.84
CDY63702 Canola plasma membrane 20.95 10.3
CDX96650 Canola cytosol, plasma membrane, vacuole 0.53 1.27
Protein Annotations
MapMan:24.2.1.6GO:A0A078GW50UniProt:A0A078GW50EnsemblPlants:CDY29741ProteinID:CDY29741ProteinID:CDY29741.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0008150GO:GO:0016020
GO:GO:0016021EnsemblPlantsGene:GSBRNA2T00043577001PFAM:PF16913PANTHER:PTHR31376PANTHER:PTHR31376:SF1InterPro:PUP_plant
SUPFAM:SSF103481TMHMM:TMhelixUniParc:UPI0004EE9AA6SEG:seg::
Description
BnaA01g19250DBnaA01g19250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GW50]
Coordinates
chrLK032243:-:11709..12842
Molecular Weight (calculated)
42159.6 Da
IEP (calculated)
9.850
GRAVY (calculated)
0.537
Length
377 amino acids
Sequence
(BLAST)
001: MVGGSKRLRR LLNQRLHEEP SKTQTHVMSK KKMKTGLVMI NCIILAIGNC GGPLITRLYF RNGGKRIWFS SFLQTAGCPI ILFPLLFSFR LRRKEATTTP
101: FFLIKPPLFL ASIVIGLLTG VDNYLYAYGL AYLPVSTSSL VISSQLAFTA FFAFFMVKQK FTPFIINAVV LLTLGAGILA LHTDGDKLAK ETHKEYIVGF
201: LMTLAAAILY AFVLPLVELT YKKARKRISY TLVLEMQMVL CFGATCFCLV GMLADGDFKE LAREARDFKL GRSTYYYVVV VFTAIIWQGF FLGSIGMIFC
301: ASSLVSGILI CALLPLTEVL AVFFFREKFQ AEKGLSLFLS LWGFVSYFYG QIKSENKTET QDQEAQLSQL PGIDSVA
Best Arabidopsis Sequence Match ( AT2G33750.2 )
(BLAST)
001: MKMKTVLVII NCIFLAIGNC GGPLMMRLYF QNGGERIWFP SFLQTVGCPL IFFPLLLSFL RRRRCLEEQE TTPFFLMKPP LFIAAIVVGL LVGFDNYLYS
101: YGLAYIPVST ASLIISAQLG FTALFAFFMV KQKFTPFTIN AIVLLTGGAV VLALNSDSDK LANETHKEYV VGFIMTLGAA LLYGFILPLV ELSYKKSGQR
201: ITYTLALEFQ MVLCFAATCV CLVGMLAAGD FKVIAGEARD FKLGESLYYV VIVFTAIIWQ AFFVGAIGLI FCASSLVSGI MVSALLPVTV ILAVICFQEK
301: FQAGKGVALA LSLWGSVSYF YGQVKSEEKT KAQDTQLSQL PVTDYVA
Arabidopsis Description
PUP2Purine permease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94GB1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.