Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G18220.1 | CDX95295 | AT2G13650.1 | 15299147 |
| AT4G18220.1 | CDY39936 | AT2G13650.1 | 15299147 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040924.1-P | Field mustard | plasma membrane | 98.21 | 98.47 |
| CDY08897 | Canola | plasma membrane | 93.62 | 93.86 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 87.5 | 87.95 |
| CDX76537 | Canola | plasma membrane | 87.5 | 87.95 |
| CDY08900 | Canola | plasma membrane | 69.13 | 87.14 |
| CDX99493 | Canola | plasma membrane | 83.16 | 83.16 |
| CDX78835 | Canola | plasma membrane | 80.87 | 81.07 |
| CDX76536 | Canola | plasma membrane | 60.46 | 80.89 |
| AT4G18210.1 | Thale cress | plasma membrane | 78.32 | 78.72 |
| AT4G18220.1 | Thale cress | plasma membrane | 77.55 | 77.95 |
| VIT_10s0003g02850.t01 | Wine grape | plasma membrane | 52.04 | 55.14 |
| KRH45390 | Soybean | plasma membrane | 43.37 | 53.12 |
| CDX90414 | Canola | plasma membrane | 49.49 | 51.73 |
| CDY01525 | Canola | plasma membrane | 49.74 | 51.59 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 38.78 | 50.84 |
| CDX76540 | Canola | plasma membrane | 50.51 | 49.87 |
| CDY08895 | Canola | plasma membrane | 50.26 | 49.87 |
| CDY12545 | Canola | plasma membrane | 37.76 | 49.66 |
| KRH46353 | Soybean | plasma membrane | 51.28 | 48.43 |
| KRG98518 | Soybean | plasma membrane | 50.77 | 48.07 |
| VIT_10s0003g02840.t01 | Wine grape | plasma membrane | 52.04 | 46.26 |
| Solyc02g071110.2.1 | Tomato | plasma membrane | 44.39 | 45.91 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 44.9 | 45.6 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 17.09 | 44.37 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 42.6 | 42.6 |
| Solyc02g071080.1.1 | Tomato | endoplasmic reticulum, plasma membrane, plastid, vacuole | 26.79 | 42.17 |
| Solyc02g071060.2.1 | Tomato | plasma membrane | 42.35 | 42.03 |
| CDY14989 | Canola | plasma membrane | 43.11 | 40.72 |
| CDX71327 | Canola | plasma membrane | 42.86 | 40.38 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 39.8 | 39.8 |
| CDY54350 | Canola | plasma membrane | 33.67 | 39.76 |
| Solyc02g071050.2.1 | Tomato | plasma membrane | 38.78 | 39.28 |
| CDX75141 | Canola | plasma membrane | 32.91 | 38.86 |
| Solyc02g071090.2.1 | Tomato | plasma membrane | 36.99 | 38.67 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 36.99 | 38.46 |
| Solyc02g071100.2.1 | Tomato | nucleus | 36.73 | 38.4 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 46.94 | 38.25 |
| Solyc03g005810.2.1 | Tomato | endoplasmic reticulum, extracellular, plastid | 23.47 | 37.55 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 36.48 | 36.39 |
| CDX99494 | Canola | plasma membrane | 47.19 | 36.06 |
| PGSC0003DMT400035010 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 33.93 | 35.09 |
| CDY17197 | Canola | extracellular, plasma membrane | 29.08 | 32.48 |
| Solyc03g005820.2.1 | Tomato | plasma membrane | 34.18 | 31.9 |
| CDX90136 | Canola | plasma membrane | 28.57 | 31.82 |
| CDY15687 | Canola | plasma membrane | 24.49 | 31.68 |
| CDY27947 | Canola | plasma membrane | 28.06 | 31.52 |
| CDX94594 | Canola | extracellular, plasma membrane | 28.06 | 31.52 |
| CDY35722 | Canola | plasma membrane | 28.32 | 31.36 |
| CDX94595 | Canola | plasma membrane | 27.81 | 31.23 |
| CDY12422 | Canola | plasma membrane | 28.83 | 30.05 |
| CDY16284 | Canola | plasma membrane | 28.57 | 29.71 |
| CDY29741 | Canola | plasma membrane | 28.32 | 29.44 |
| CDY72169 | Canola | plasma membrane | 17.86 | 27.67 |
| CDY29404 | Canola | plasma membrane | 26.53 | 27.3 |
| CDY29401 | Canola | plasma membrane | 23.72 | 27.03 |
| CDY39353 | Canola | plasma membrane | 26.28 | 26.96 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 26.02 | 26.91 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 26.02 | 26.91 |
| CDY67986 | Canola | plasma membrane | 25.26 | 26.54 |
| CDY46618 | Canola | plasma membrane | 15.31 | 26.43 |
| CDY02338 | Canola | plasma membrane | 20.66 | 25.31 |
| CDY09527 | Canola | plasma membrane | 20.66 | 25.31 |
| CDY39352 | Canola | plasma membrane | 25.0 | 25.13 |
| CDY09533 | Canola | plasma membrane | 20.41 | 25.0 |
| CDY29403 | Canola | plasma membrane | 24.49 | 24.94 |
| CDX90135 | Canola | plasma membrane | 20.15 | 24.46 |
| CDY53149 | Canola | plasma membrane | 24.49 | 24.43 |
| CDY64442 | Canola | plasma membrane | 24.23 | 24.3 |
| CDX94937 | Canola | plasma membrane | 23.47 | 24.27 |
| CDY22619 | Canola | plasma membrane | 23.21 | 24.14 |
| CDX96651 | Canola | plasma membrane | 26.02 | 24.11 |
| CDY35721 | Canola | plasma membrane | 19.39 | 23.82 |
| CDX93469 | Canola | plasma membrane | 22.96 | 23.32 |
| CDY63252 | Canola | extracellular | 24.23 | 21.99 |
| CDY31805 | Canola | plasma membrane | 24.74 | 21.9 |
| CDX73177 | Canola | plasma membrane | 18.62 | 17.26 |
| CDY63702 | Canola | plasma membrane | 25.51 | 13.04 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.26 | 0.64 |
Protein Annotations
| EnsemblPlants:CDX76538 | EnsemblPlantsGene:GSBRNA2T00126966001 | GO:A0A078CNB1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 |
| PANTHER:PTHR31376:SF17 | PFAM:PF16913 | ProteinID:CDX76538 | ProteinID:CDX76538.1 | SEG:seg | SUPFAM:SSF103481 |
| TMHMM:TMhelix | UniParc:UPI0004EEEC63 | MapMan:24.2.1.6 | : | : | : |
Description
BnaA08g08620D
Coordinates
chrLK031807:-:1933288..1935060
Molecular Weight (calculated)
43396.7 Da
IEP (calculated)
8.515
GRAVY (calculated)
0.299
Length
392 amino acids
Sequence
(BLAST)
(BLAST)
001: MKGDQELQVI VVQHGKESDP TVEEERNQTG ESHSNRYKRW LLVFVYTFFV ISGQSVATIL GRLYYDNGGN SKWLATVVQL VGFPVLLPYY LLSSKTHTTT
101: HRDDGKAVLH RNRVLVYLAL GVLVGGDCYL YSIGLLYLPV STFSLICASQ LAFNAFFSYF INSQKLTPII LNSLLLLTIS STLLAFNSEE SNFRKVTRGQ
201: YVTSFICTIG ASAGYGLSLS LQQLAFSKVL KRQNFSEVMD LIIYVSLVAS CVSVVGLFAS GEWETLSSEM DSYKPGKVSY VMNLVWTAVT WQVFNIGSTW
301: LIFEISSLFS NAIGVLGLPV VPVLAVIIFH DKMNGLKVIS MILAIWGFMS YVYQHYLDDK NLKKSLGMPT TGSSDSPEAK GSSAQKIQTP AS
101: HRDDGKAVLH RNRVLVYLAL GVLVGGDCYL YSIGLLYLPV STFSLICASQ LAFNAFFSYF INSQKLTPII LNSLLLLTIS STLLAFNSEE SNFRKVTRGQ
201: YVTSFICTIG ASAGYGLSLS LQQLAFSKVL KRQNFSEVMD LIIYVSLVAS CVSVVGLFAS GEWETLSSEM DSYKPGKVSY VMNLVWTAVT WQVFNIGSTW
301: LIFEISSLFS NAIGVLGLPV VPVLAVIIFH DKMNGLKVIS MILAIWGFMS YVYQHYLDDK NLKKSLGMPT TGSSDSPEAK GSSAQKIQTP AS
001: MKGDQEVQVI VQQGKEPIPT DQDERSSVSG SQTKLSHSNT YKRWLRVAIY TFFVISGQSV ATILGRLYYE NGGNSKWLAT VVQLVGFPIL LPYHLLSVKT
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK
101: HTTTQRDGKL TSLRNRALVY IVLGLLVGAA CYLYSIGLLY LPVSTLSLIC ASQLAFTAFF SYLLNSQKLT PIILNSLFLL TISSTLLAFN NEESDSKKVT
201: KGEYVKGFVC TVGASAGFGL LLSLQQLAFR KVLKKQTFSE VINMIIYMSL VASCVSVVGL FASSEWKTLS SEMENYKLGK VSYVMNLVWT AVTWQVFSIG
301: CTGLIFELSS LFSNAISALG LPVVPILAVI IFHDKMNGLK VISMILAIWG FVSYVYQQYL DETNLKKSNE IPTTESPDRP EAEGSSEQSK
Arabidopsis Description
PUP21Purine permease 21 [Source:UniProtKB/Swiss-Prot;Acc:O49726]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.