Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G30840.1 | CDX78905 | AT4G19030.1 | 21798944 |
| AT1G30840.1 | CDX98596 | AT4G19030.1 | 21798944 |
| AT1G30840.1 | CDX99411 | AT4G19030.1 | 21798944 |
| AT1G30840.1 | CDY01565 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY09527 | Canola | plasma membrane | 95.62 | 95.62 |
| CDY09533 | Canola | plasma membrane | 95.0 | 95.0 |
| Bra023141.1-P | Field mustard | plasma membrane | 99.38 | 81.33 |
| Bra023144.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 99.06 | 81.07 |
| AT1G30840.1 | Thale cress | peroxisome, plasma membrane, vacuole | 82.19 | 68.85 |
| VIT_18s0089g01410.t01 | Wine grape | plasma membrane | 57.19 | 53.2 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 55.62 | 49.86 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 56.25 | 47.12 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 56.88 | 45.73 |
| KRH37148 | Soybean | cytosol, peroxisome, plasma membrane | 55.31 | 44.14 |
| KRH12150 | Soybean | plasma membrane | 48.75 | 43.58 |
| KRH37147 | Soybean | nucleus, peroxisome, plasma membrane | 54.38 | 42.54 |
| GSMUA_Achr6P30590_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 45.62 | 42.44 |
| KRH12149 | Soybean | plasma membrane | 53.44 | 42.33 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 54.06 | 42.09 |
| KRH37149 | Soybean | plasma membrane | 52.81 | 41.52 |
| PGSC0003DMT400035529 | Potato | cytosol, mitochondrion, peroxisome, plastid | 55.0 | 41.51 |
| TraesCS3A01G267500.1 | Wheat | plastid | 48.12 | 40.21 |
| TraesCS3B01G300900.1 | Wheat | plastid | 47.5 | 40.0 |
| TraesCS3D01G267700.1 | Wheat | plastid | 47.81 | 39.95 |
| GSMUA_Achr9P06170_001 | Banana | cytosol | 46.88 | 39.89 |
| GSMUA_Achr3P16440_001 | Banana | extracellular, peroxisome, plastid | 46.88 | 39.68 |
| EES18657 | Sorghum | mitochondrion | 41.88 | 38.84 |
| EES01264 | Sorghum | plasma membrane | 46.56 | 38.5 |
| OQU78406 | Sorghum | plastid | 44.38 | 38.48 |
| Zm00001d038965_P001 | Maize | mitochondrion, plastid | 43.75 | 38.25 |
| HORVU3Hr1G062690.1 | Barley | plastid | 47.5 | 38.0 |
| Os01t0680200-01 | Rice | cytosol, plasma membrane, vacuole | 45.62 | 37.73 |
| Zm00001d043858_P001 | Maize | vacuole | 46.56 | 37.63 |
| Os05t0556800-01 | Rice | mitochondrion | 44.06 | 36.81 |
| Zm00001d011603_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 43.75 | 36.36 |
| TraesCS1A01G386000.1 | Wheat | plastid | 41.56 | 35.37 |
| TraesCS1B01G413400.1 | Wheat | plastid | 41.25 | 34.83 |
| TraesCS1D01G394000.1 | Wheat | plastid | 40.94 | 34.56 |
| TraesCS1D01G393900.1 | Wheat | plastid | 42.5 | 34.52 |
| GSMUA_Achr8P27440_001 | Banana | mitochondrion | 45.62 | 34.52 |
| Os01t0504100-01 | Rice | plasma membrane | 40.62 | 34.3 |
| HORVU1Hr1G085120.1 | Barley | plastid | 42.81 | 34.25 |
| TraesCS1A01G385800.1 | Wheat | plastid | 43.12 | 34.16 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 40.31 | 34.13 |
| TraesCS1A01G386100.1 | Wheat | plastid | 41.88 | 33.17 |
| TraesCS1B01G413500.1 | Wheat | plastid | 41.88 | 33.17 |
| TraesCS1D01G394100.1 | Wheat | plastid | 41.56 | 32.92 |
| PGSC0003DMT400086024 | Potato | cytosol, endoplasmic reticulum, extracellular | 14.38 | 32.62 |
| TraesCS1B01G413300.1 | Wheat | mitochondrion | 42.81 | 32.46 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 41.25 | 32.43 |
| HORVU1Hr1G085150.1 | Barley | plastid | 41.88 | 31.6 |
| CDY72169 | Canola | plasma membrane | 24.06 | 30.43 |
| PGSC0003DMT400090938 | Potato | endoplasmic reticulum, extracellular | 15.0 | 30.19 |
| CDX90136 | Canola | plasma membrane | 32.19 | 29.26 |
| PGSC0003DMT400090756 | Potato | endoplasmic reticulum, extracellular, vacuole | 13.12 | 29.17 |
| CDY35722 | Canola | plasma membrane | 31.88 | 28.81 |
| CDY17197 | Canola | extracellular, plasma membrane | 31.25 | 28.49 |
| CDY27947 | Canola | plasma membrane | 30.0 | 27.51 |
| CDY12422 | Canola | plasma membrane | 31.88 | 27.13 |
| CDY29741 | Canola | plasma membrane | 31.88 | 27.06 |
| CDY16284 | Canola | plasma membrane | 31.56 | 26.79 |
| CDY08900 | Canola | plasma membrane | 25.62 | 26.37 |
| CDX94595 | Canola | plasma membrane | 28.12 | 25.79 |
| CDX90135 | Canola | plasma membrane | 25.94 | 25.7 |
| CDX94594 | Canola | extracellular, plasma membrane | 27.81 | 25.5 |
| CDY12545 | Canola | plasma membrane | 22.81 | 24.5 |
| CDY15687 | Canola | plasma membrane | 23.12 | 24.42 |
| CDY35721 | Canola | plasma membrane | 24.06 | 24.14 |
| CDY46618 | Canola | plasma membrane | 16.56 | 23.35 |
| CDX78835 | Canola | plasma membrane | 28.44 | 23.27 |
| CDY36342 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 21.56 | 23.08 |
| CDX99493 | Canola | plasma membrane | 28.12 | 22.96 |
| CDX76536 | Canola | plasma membrane | 20.62 | 22.53 |
| CDY01525 | Canola | plasma membrane | 25.94 | 21.96 |
| CDX90414 | Canola | plasma membrane | 25.0 | 21.33 |
| CDY08895 | Canola | plasma membrane | 26.25 | 21.27 |
| CDX76540 | Canola | plasma membrane | 26.25 | 21.16 |
| CDX71327 | Canola | plasma membrane | 27.5 | 21.15 |
| CDX76537 | Canola | plasma membrane | 25.62 | 21.03 |
| CDY14989 | Canola | plasma membrane | 27.19 | 20.96 |
| CDY34789 | Canola | cytosol, peroxisome, plasma membrane | 24.69 | 20.84 |
| CDX76538 | Canola | plasma membrane | 25.31 | 20.66 |
| CDX76826 | Canola | cytosol, peroxisome, plasma membrane | 24.38 | 20.58 |
| CDY08899 | Canola | cytosol, peroxisome, plasma membrane | 25.0 | 20.51 |
| CDY08897 | Canola | plasma membrane | 25.0 | 20.46 |
| CDY54350 | Canola | plasma membrane | 20.0 | 19.28 |
| CDX75141 | Canola | plasma membrane | 19.38 | 18.67 |
| CDX78833 | Canola | cytosol, extracellular, plasma membrane | 26.25 | 17.46 |
| CDX99494 | Canola | plasma membrane | 26.56 | 16.57 |
| CDY22619 | Canola | plasma membrane | 19.06 | 16.18 |
| CDY67986 | Canola | plasma membrane | 18.44 | 15.82 |
| CDY53149 | Canola | plasma membrane | 19.06 | 15.52 |
| CDY64442 | Canola | plasma membrane | 18.75 | 15.35 |
| CDY29401 | Canola | plasma membrane | 16.25 | 15.12 |
| CDX93469 | Canola | plasma membrane | 17.19 | 14.25 |
| CDX94937 | Canola | plasma membrane | 16.56 | 13.98 |
| CDY29404 | Canola | plasma membrane | 16.56 | 13.91 |
| CDY63252 | Canola | extracellular | 18.75 | 13.89 |
| CDY31805 | Canola | plasma membrane | 19.06 | 13.77 |
| CDY39353 | Canola | plasma membrane | 16.25 | 13.61 |
| CDY39352 | Canola | plasma membrane | 15.94 | 13.08 |
| CDY29403 | Canola | plasma membrane | 15.62 | 12.99 |
| CDX96651 | Canola | plasma membrane | 15.94 | 12.06 |
| CDX73177 | Canola | plasma membrane | 15.31 | 11.58 |
| CDY63702 | Canola | plasma membrane | 18.12 | 7.56 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, golgi | 1.56 | 4.27 |
| CDX96650 | Canola | cytosol, plasma membrane, vacuole | 0.62 | 1.27 |
Protein Annotations
| EnsemblPlants:CDY02338 | EnsemblPlantsGene:GSBRNA2T00113817001 | GO:A0A078ERZ4 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:MFS_trans_sf | InterPro:PUP_plant |
| PANTHER:PTHR31376 | PANTHER:PTHR31376:SF3 | PFAM:PF16913 | ProteinID:CDY02338 | ProteinID:CDY02338.1 | SEG:seg |
| SUPFAM:SSF103473 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI0004EE8811 | MapMan:24.2.1.6 | : |
Description
BnaA09g25640D
Coordinates
chrLK031933:+:679901..681076
Molecular Weight (calculated)
35526.5 Da
IEP (calculated)
8.773
GRAVY (calculated)
0.346
Length
320 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDVRVNADQ QEEGEQQQNL VKAPVKRSLG LLITTYGCLF VGSIASSLLA KYYFVHGGSS RWVSTWVQSA GFPLLLGLIY FPHFVFKTTK RRPFTRFTHR
101: HLLFSVVIGL ILGFNNFLFS WGTSYLPVST SSLLLSTQLI FTLILSVIIV KQKVTFSNLN CVVLLTLSSV LLALGSSQDK PAGLTKTKYF IGFLSTIGAG
201: LLFALYLPVT ERVYRSVYCY AMVMEMQLVM EFSATVFATI GVVVYGDAFG GVKIVSTVLC IWGFSSYVYG IYVKMKKDEK NEKEEEEKGH SGMKTVEDGG
301: EMEVEMGKVK DDVAAADERV
101: HLLFSVVIGL ILGFNNFLFS WGTSYLPVST SSLLLSTQLI FTLILSVIIV KQKVTFSNLN CVVLLTLSSV LLALGSSQDK PAGLTKTKYF IGFLSTIGAG
201: LLFALYLPVT ERVYRSVYCY AMVMEMQLVM EFSATVFATI GVVVYGDAFG GVKIVSTVLC IWGFSSYVYG IYVKMKKDEK NEKEEEEKGH SGMKTVEDGG
301: EMEVEMGKVK DDVAAADERV
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Arabidopsis Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.