Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023144.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 85.6 | 83.63 |
| Bra023141.1-P | Field mustard | plasma membrane | 85.34 | 83.38 |
| CDY02338 | Canola | plasma membrane | 68.85 | 82.19 |
| CDY09527 | Canola | plasma membrane | 67.02 | 80.0 |
| CDY09533 | Canola | plasma membrane | 66.49 | 79.38 |
| VIT_18s0089g01410.t01 | Wine grape | plasma membrane | 57.85 | 64.24 |
| PGSC0003DMT400086024 | Potato | cytosol, endoplasmic reticulum, extracellular | 22.25 | 60.28 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 55.76 | 59.66 |
| PGSC0003DMT400090938 | Potato | endoplasmic reticulum, extracellular | 23.56 | 56.6 |
| Solyc10g005150.1.1 | Tomato | plasma membrane | 54.97 | 54.97 |
| Solyc10g005170.1.1 | Tomato | cytosol, peroxisome, plasma membrane | 56.54 | 54.27 |
| PGSC0003DMT400090756 | Potato | endoplasmic reticulum, extracellular, vacuole | 20.42 | 54.17 |
| KRH12150 | Soybean | plasma membrane | 49.48 | 52.79 |
| KRH37148 | Soybean | cytosol, peroxisome, plasma membrane | 54.71 | 52.12 |
| GSMUA_Achr6P30590_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 46.6 | 51.74 |
| KRH37149 | Soybean | plasma membrane | 54.97 | 51.6 |
| KRH37147 | Soybean | nucleus, peroxisome, plasma membrane | 54.71 | 51.1 |
| KRH12149 | Soybean | plasma membrane | 53.93 | 50.99 |
| Solyc02g082170.1.1 | Tomato | plasma membrane | 54.19 | 50.37 |
| PGSC0003DMT400035529 | Potato | cytosol, mitochondrion, peroxisome, plastid | 54.97 | 49.53 |
| GSMUA_Achr3P16440_001 | Banana | extracellular, peroxisome, plastid | 47.91 | 48.41 |
| TraesCS3A01G267500.1 | Wheat | plastid | 47.64 | 47.52 |
| TraesCS3B01G300900.1 | Wheat | plastid | 47.12 | 47.37 |
| TraesCS3D01G267700.1 | Wheat | plastid | 47.38 | 47.26 |
| GSMUA_Achr9P06170_001 | Banana | cytosol | 45.81 | 46.54 |
| Zm00001d038965_P001 | Maize | mitochondrion, plastid | 43.72 | 45.63 |
| EES18657 | Sorghum | mitochondrion | 41.1 | 45.51 |
| OQU78406 | Sorghum | plastid | 43.72 | 45.26 |
| HORVU3Hr1G062690.1 | Barley | plastid | 47.12 | 45.0 |
| Os01t0680200-01 | Rice | cytosol, plasma membrane, vacuole | 45.55 | 44.96 |
| EES01264 | Sorghum | plasma membrane | 45.29 | 44.7 |
| Zm00001d043858_P001 | Maize | vacuole | 46.07 | 44.44 |
| Zm00001d011603_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 44.5 | 44.16 |
| Os01t0504100-01 | Rice | plasma membrane | 41.88 | 42.22 |
| GSMUA_Achr8P27440_001 | Banana | mitochondrion | 46.34 | 41.84 |
| Os05t0556800-01 | Rice | mitochondrion | 41.88 | 41.78 |
| TraesCS1A01G386000.1 | Wheat | plastid | 40.58 | 41.22 |
| TraesCS1B01G413400.1 | Wheat | plastid | 40.84 | 41.16 |
| TraesCS1D01G393900.1 | Wheat | plastid | 42.15 | 40.86 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 40.31 | 40.74 |
| TraesCS1D01G394000.1 | Wheat | plastid | 40.31 | 40.63 |
| TraesCS1A01G385800.1 | Wheat | plastid | 42.93 | 40.59 |
| HORVU1Hr1G085120.1 | Barley | plastid | 42.41 | 40.5 |
| TraesCS1B01G413500.1 | Wheat | plastid | 41.88 | 39.6 |
| TraesCS1A01G386100.1 | Wheat | plastid | 41.88 | 39.6 |
| TraesCS1D01G394100.1 | Wheat | plastid | 41.62 | 39.36 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 41.1 | 38.57 |
| TraesCS1B01G413300.1 | Wheat | mitochondrion | 42.41 | 38.39 |
| HORVU1Hr1G085150.1 | Barley | plastid | 41.36 | 37.26 |
| AT1G28230.1 | Thale cress | plasma membrane | 32.2 | 34.55 |
| AT2G33750.1 | Thale cress | plasma membrane | 29.84 | 31.84 |
| AT1G28220.1 | Thale cress | plasma membrane | 29.06 | 31.62 |
| AT1G44750.1 | Thale cress | plasma membrane | 26.96 | 27.18 |
| AT4G08700.1 | Thale cress | plasma membrane | 24.35 | 25.76 |
| AT4G18190.1 | Thale cress | plasma membrane | 25.13 | 24.81 |
| AT5G41160.1 | Thale cress | plasma membrane | 23.56 | 24.73 |
| AT2G24220.2 | Thale cress | plasma membrane | 24.35 | 24.54 |
| AT4G18220.1 | Thale cress | plasma membrane | 24.61 | 24.1 |
| AT4G18210.1 | Thale cress | plasma membrane | 24.35 | 23.85 |
| AT4G18205.1 | Thale cress | plasma membrane | 22.77 | 23.08 |
| AT4G18195.1 | Thale cress | plasma membrane | 23.3 | 22.59 |
| AT4G18197.1 | Thale cress | plasma membrane | 21.47 | 21.03 |
| AT1G57990.1 | Thale cress | plasma membrane | 20.68 | 20.26 |
| AT1G09860.1 | Thale cress | plasma membrane | 19.37 | 19.32 |
| AT1G57980.1 | Thale cress | plasma membrane | 19.63 | 19.04 |
| AT1G57943.1 | Thale cress | plasma membrane | 19.63 | 18.84 |
| AT1G19770.1 | Thale cress | plasma membrane | 19.11 | 18.58 |
| AT1G47603.1 | Thale cress | plasma membrane | 18.59 | 18.07 |
| AT1G75470.1 | Thale cress | plasma membrane | 17.54 | 17.31 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, golgi | 1.05 | 3.42 |
Protein Annotations
| MapMan:24.2.1.6 | EntrezGene:839967 | ProteinID:AAD32940.1 | ProteinID:AEE31282.1 | ProteinID:AEE31283.1 | ArrayExpress:AT1G30840 |
| EnsemblPlantsGene:AT1G30840 | RefSeq:AT1G30840 | TAIR:AT1G30840 | RefSeq:AT1G30840-TAIR-G | EnsemblPlants:AT1G30840.1 | TAIR:AT1G30840.1 |
| Symbol:ATPUP4 | EMBL:AY084641 | Unigene:At.40478 | EMBL:BT004160 | EMBL:BT005495 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005345 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006863 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:1904823 | RefSeq:NP_001185119.1 | RefSeq:NP_564365.1 | PFAM:PF16913 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007095 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009052 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF3 | Symbol:PUP4 |
| InterPro:PUP_plant | UniProt:Q9SY29 | SUPFAM:SSF103481 | TMHMM:TMhelix | UniParc:UPI000000C2B5 | SEG:seg |
Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
Coordinates
chr1:+:10974383..10976063
Molecular Weight (calculated)
42323.1 Da
IEP (calculated)
8.950
GRAVY (calculated)
0.456
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.