Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, cytosol
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
- plastid 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| PGSC0003DMT400071510 | |
| PGSC0003DMT400073246 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G30840.1 | PGSC0003DMT400071510 | AT4G19030.1 | 21798944 |
| AT1G30840.1 | PGSC0003DMT400073246 | AT4G19030.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400090938 | Potato | endoplasmic reticulum, extracellular | 92.2 | 81.76 |
| PGSC0003DMT400090756 | Potato | endoplasmic reticulum, extracellular, vacuole | 77.31 | 75.69 |
| Solyc10g005160.1.1 | Tomato | plasma membrane | 90.78 | 35.85 |
| VIT_18s0089g01410.t01 | Wine grape | plasma membrane | 69.5 | 28.49 |
| PGSC0003DMT400035529 | Potato | cytosol, mitochondrion, peroxisome, plastid | 74.47 | 24.76 |
| PGSC0003DMT400039797 | Potato | mitochondrion | 29.79 | 24.0 |
| PGSC0003DMT400035009 | Potato | endoplasmic reticulum, extracellular | 24.11 | 22.52 |
| Bra023141.1-P | Field mustard | plasma membrane | 62.41 | 22.51 |
| Bra023144.1-P | Field mustard | endoplasmic reticulum, peroxisome, plasma membrane | 62.41 | 22.51 |
| AT1G30840.1 | Thale cress | peroxisome, plasma membrane, vacuole | 60.28 | 22.25 |
| KRH12150 | Soybean | plasma membrane | 55.32 | 21.79 |
| KRH12149 | Soybean | plasma membrane | 60.99 | 21.29 |
| KRH37148 | Soybean | cytosol, peroxisome, plasma membrane | 60.28 | 21.2 |
| KRH37149 | Soybean | plasma membrane | 60.99 | 21.13 |
| GSMUA_Achr3P16440_001 | Banana | extracellular, peroxisome, plastid | 55.32 | 20.63 |
| KRH37147 | Soybean | nucleus, peroxisome, plasma membrane | 59.57 | 20.54 |
| GSMUA_Achr6P30590_001 | Banana | endoplasmic reticulum, peroxisome, plasma membrane | 49.65 | 20.35 |
| GSMUA_Achr9P06170_001 | Banana | cytosol | 51.77 | 19.41 |
| TraesCS3B01G300900.1 | Wheat | plastid | 48.94 | 18.16 |
| TraesCS3A01G267500.1 | Wheat | plastid | 48.94 | 18.02 |
| PGSC0003DMT400072048 | Potato | extracellular, plasma membrane | 34.75 | 18.01 |
| Zm00001d011603_P001 | Maize | endoplasmic reticulum, plasma membrane, plastid, vacuole | 48.94 | 17.92 |
| TraesCS3D01G267700.1 | Wheat | plastid | 48.23 | 17.75 |
| GSMUA_Achr8P27440_001 | Banana | mitochondrion | 52.48 | 17.49 |
| Zm00001d043858_P001 | Maize | vacuole | 48.94 | 17.42 |
| Os01t0504100-01 | Rice | plasma membrane | 46.81 | 17.41 |
| Zm00001d038965_P001 | Maize | mitochondrion, plastid | 44.68 | 17.21 |
| EES18657 | Sorghum | mitochondrion | 41.84 | 17.1 |
| Os01t0680200-01 | Rice | cytosol, plasma membrane, vacuole | 46.81 | 17.05 |
| HORVU3Hr1G062690.1 | Barley | plastid | 48.23 | 17.0 |
| EES01264 | Sorghum | plasma membrane | 46.1 | 16.8 |
| HORVU1Hr1G085140.1 | Barley | endoplasmic reticulum | 44.68 | 16.67 |
| TraesCS1B01G413400.1 | Wheat | plastid | 44.68 | 16.62 |
| OQU78406 | Sorghum | plastid | 43.26 | 16.53 |
| TraesCS1A01G386000.1 | Wheat | plastid | 43.97 | 16.49 |
| TraesCS1D01G394000.1 | Wheat | plastid | 43.97 | 16.36 |
| Os05t0556800-01 | Rice | mitochondrion | 43.97 | 16.19 |
| TraesCS1D01G393900.1 | Wheat | plastid | 44.68 | 15.99 |
| HORVU1Hr1G085120.1 | Barley | plastid | 44.68 | 15.75 |
| TraesCS1A01G386100.1 | Wheat | plastid | 44.68 | 15.59 |
| TraesCS1B01G413500.1 | Wheat | plastid | 44.68 | 15.59 |
| TraesCS1A01G385800.1 | Wheat | plastid | 44.68 | 15.59 |
| TraesCS1D01G394100.1 | Wheat | plastid | 44.68 | 15.59 |
| HORVU1Hr1G085230.1 | Barley | mitochondrion | 44.68 | 15.48 |
| TraesCS1B01G413300.1 | Wheat | mitochondrion | 45.39 | 15.17 |
| HORVU1Hr1G085150.1 | Barley | plastid | 44.68 | 14.86 |
| PGSC0003DMT400045771 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 17.73 | 14.71 |
| CDY02338 | Canola | plasma membrane | 32.62 | 14.38 |
| PGSC0003DMT400036604 | Potato | extracellular, plasma membrane | 34.04 | 13.99 |
| PGSC0003DMT400071864 | Potato | plasma membrane | 32.62 | 13.49 |
| CDY09527 | Canola | plasma membrane | 29.79 | 13.12 |
| CDY09533 | Canola | plasma membrane | 29.79 | 13.12 |
| PGSC0003DMT400005467 | Potato | plasma membrane | 32.62 | 13.07 |
| PGSC0003DMT400004654 | Potato | endoplasmic reticulum, plasma membrane, plastid | 27.66 | 12.91 |
| PGSC0003DMT400005470 | Potato | extracellular, plasma membrane | 31.91 | 12.71 |
| PGSC0003DMT400028938 | Potato | cytosol, endoplasmic reticulum, plasma membrane | 29.08 | 11.52 |
| PGSC0003DMT400004320 | Potato | plasma membrane | 29.79 | 11.38 |
| PGSC0003DMT400025116 | Potato | plasma membrane | 29.79 | 10.88 |
| PGSC0003DMT400045772 | Potato | cytosol, peroxisome, vacuole | 24.11 | 10.69 |
| PGSC0003DMT400085139 | Potato | mitochondrion | 29.08 | 10.59 |
| PGSC0003DMT400004651 | Potato | cytosol, nucleus, plasma membrane | 24.82 | 10.54 |
| PGSC0003DMT400035010 | Potato | endoplasmic reticulum, peroxisome, plasma membrane | 26.95 | 10.03 |
| PGSC0003DMT400025122 | Potato | plasma membrane | 25.53 | 9.55 |
| PGSC0003DMT400025125 | Potato | plasma membrane | 25.53 | 9.18 |
| PGSC0003DMT400025118 | Potato | plasma membrane | 24.11 | 8.65 |
| PGSC0003DMT400025123 | Potato | plasma membrane | 23.4 | 8.42 |
| PGSC0003DMT400054207 | Potato | plasma membrane | 9.22 | 7.34 |
| GSMUA_Achr10P... | Banana | cytosol, extracellular, golgi | 2.13 | 2.56 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400086024 | EnsemblPlantsGene:PGSC0003DMG400035595 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | InterPro:PUP_plant | PANTHER:PTHR31376 | PANTHER:PTHR31376:SF3 |
| PFAM:PF16913 | PGSC:PGSC0003DMG400035595 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296AC3A | UniProt:M1DAU1 |
| MapMan:24.2.1.6 | : | : | : | : | : |
Description
Purine transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400035595]
Coordinates
chr10:+:304093..304518
Molecular Weight (calculated)
15625.6 Da
IEP (calculated)
4.519
GRAVY (calculated)
0.443
Length
141 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVEMQMVME LSATILATLG MIIDGGFPEM KKEGKNVFDL GEKAYWLTVM FNVVTWQFCF MGTAGMVFLT SSLTGGVCMT ALMAVNVLGG VIVYGDNFGG
101: IKVVSTLLCI WGFSSYLYGM YMKMKEEEKK KKEGSIEIEE Q
101: IKVVSTLLCI WGFSSYLYGM YMKMKEEEKK KKEGSIEIEE Q
001: MSDGRVNADP QQEENMVKPP VKRSLTLLIV TYFFLFFGSI ASSLLAKYYF VYGGSSRWVS TWVQSAGFPL LLILIYFPHY VLKTTTRRPF TRFTLRHLIF
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
101: SVLIGLVLGF NNFLFSWGTS YLPVSTSSLL LSTQLVFTLI LSRIIVKQKI TFSNLNCVVL LTLSSVLLAL DSSKDKPSGL TKTKYFIGYV STIGAGLLFA
201: LYLPVTEKLY RTVYCYAMVM EVQLVMEFAA TVFATIGMAC EGGFKEMVKE ANHVFTKGPT FYWTFAILAN VVTWQLSFAA TSGMVYLTSG ITGGICMTAL
301: LAMNVIGGVV AYGDVFGGVK IVSTVLCIWG FSSYTYGMYM KMKKEEKEKG EYSGVKTTED SGEMEVEMGN VKDDVAAADD RA
Arabidopsis Description
PUP4Probable purine permease 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9SY29]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.